RNA–Protein interactions for RNA: ENST00000465231.1

CLCN2-206, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 2

Gene CLCN2, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-206ENST00000465231 PARP10Q53GL7 1025 aa15.22■□□□□ 0.03
CLCN2-206ENST00000465231 TPTE2Q6XPS3 522 aa15.22■□□□□ 0.03
CLCN2-206ENST00000465231 SYNE4Q8N205 404 aa15.22■□□□□ 0.03
CLCN2-206ENST00000465231 DDX60Q8IY21 1712 aaKnown RBP15.22■□□□□ 0.03
CLCN2-206ENST00000465231 CWF19L2Q2TBE0 894 aaKnown RBP15.21■□□□□ 0.03
CLCN2-206ENST00000465231 PPP1R42Q7Z4L9 355 aa15.21■□□□□ 0.03
CLCN2-206ENST00000465231 DNAAF4Q8WXU2 420 aa15.21■□□□□ 0.03
CLCN2-206ENST00000465231 UTP14AQ9BVJ6 771 aaKnown RBP15.21■□□□□ 0.03
CLCN2-206ENST00000465231 IBTKQ9P2D0 1353 aaPredicted RBP15.21■□□□□ 0.02
CLCN2-206ENST00000465231 IGKV5-2P06315 115 aa15.2■□□□□ 0.02
CLCN2-206ENST00000465231 RTL5Q5HYW3 569 aaPredicted RBP15.2■□□□□ 0.02
CLCN2-206ENST00000465231 JARID2Q92833 1246 aaPredicted RBP15.2■□□□□ 0.02
CLCN2-206ENST00000465231 NYXQ9GZU5 481 aa15.2■□□□□ 0.02
CLCN2-206ENST00000465231 TRMT112Q9UI30 125 aaKnown RBP15.2■□□□□ 0.02
CLCN2-206ENST00000465231 BCAR3O75815 825 aa15.19■□□□□ 0.02
CLCN2-206ENST00000465231 KCNA3P22001 575 aa15.19■□□□□ 0.02
CLCN2-206ENST00000465231 TGFB2P61812 414 aa15.19■□□□□ 0.02
CLCN2-206ENST00000465231 C2CD5Q86YS7 1000 aa15.19■□□□□ 0.02
CLCN2-206ENST00000465231 PELP1Q8IZL8 1130 aaKnown RBP15.19■□□□□ 0.02
CLCN2-206ENST00000465231 BRIP1Q9BX63 1249 aa15.19■□□□□ 0.02
CLCN2-206ENST00000465231 SRCAPQ6ZRS2 3230 aa15.19■□□□□ 0.02
CLCN2-206ENST00000465231 NEURL1BA8MQ27 555 aa15.18■□□□□ 0.02
CLCN2-206ENST00000465231 NEXNQ0ZGT2 675 aa15.18■□□□□ 0.02
CLCN2-206ENST00000465231 SLC4A10Q6U841 1118 aa15.18■□□□□ 0.02
CLCN2-206ENST00000465231 C3orf67Q6ZVT6 689 aa15.18■□□□□ 0.02
CLCN2-206ENST00000465231 FAM89AQ96GI7 184 aa15.18■□□□□ 0.02
CLCN2-206ENST00000465231 NOB1Q9ULX3 412 aaKnown RBP15.18■□□□□ 0.02
CLCN2-206ENST00000465231 SH3TC1Q8TE82 1336 aa15.17■□□□□ 0.02
CLCN2-206ENST00000465231 TAF1P21675 1872 aa15.17■□□□□ 0.02
CLCN2-206ENST00000465231 HCLS1P14317 486 aaPredicted RBP15.17■□□□□ 0.02
CLCN2-206ENST00000465231 PDE6BP35913 854 aa15.17■□□□□ 0.02
CLCN2-206ENST00000465231 TRIM28Q13263 835 aaKnown RBP15.17■□□□□ 0.02
CLCN2-206ENST00000465231 CCDC191Q8NCU4 936 aa15.17■□□□□ 0.02
CLCN2-206ENST00000465231 CWC25Q9NXE8 425 aaPredicted RBP15.17■□□□□ 0.02
CLCN2-206ENST00000465231 PTPRCP08575 1304 aa15.17■□□□□ 0.02
CLCN2-206ENST00000465231 ARFGEF1Q9Y6D6 1849 aa15.16■□□□□ 0.02
CLCN2-206ENST00000465231 H0YIN7 160 aa15.16■□□□□ 0.02
CLCN2-206ENST00000465231 YBX3P16989 372 aaKnown RBP eCLIP15.16■□□□□ 0.02
CLCN2-206ENST00000465231 BEND3Q5T5X7 828 aa15.16■□□□□ 0.02
CLCN2-206ENST00000465231 TNNQ9UQP3 1299 aa15.16■□□□□ 0.02
CLCN2-206ENST00000465231 MYH3P11055 1940 aa15.15■□□□□ 0.02
CLCN2-206ENST00000465231 SLX4Q8IY92 1834 aa15.15■□□□□ 0.02
CLCN2-206ENST00000465231 BRPF1P55201 1214 aaPredicted RBP15.15■□□□□ 0.02
CLCN2-206ENST00000465231 LINS1Q8NG48 757 aa15.15■□□□□ 0.02
CLCN2-206ENST00000465231 ZNF622Q969S3 477 aaKnown RBP eCLIP15.15■□□□□ 0.02
CLCN2-206ENST00000465231 BCS1LQ9Y276 419 aa15.15■□□□□ 0.02
CLCN2-206ENST00000465231 RIC1Q4ADV7 1423 aa15.15■□□□□ 0.02
CLCN2-206ENST00000465231 RNF123Q5XPI4 1314 aa15.15■□□□□ 0.02
CLCN2-206ENST00000465231 PCCAP05165 728 aaPredicted RBP15.14■□□□□ 0.01
CLCN2-206ENST00000465231 SRGNP10124 158 aa15.14■□□□□ 0.01
CLCN2-206ENST00000465231 GCKRQ14397 625 aa15.14■□□□□ 0.01
CLCN2-206ENST00000465231 GPR162Q16538 588 aa15.14■□□□□ 0.01
CLCN2-206ENST00000465231 SLC10A5Q5PT55 438 aa15.14■□□□□ 0.01
CLCN2-206ENST00000465231 ZBTB38Q8NAP3 1195 aaPredicted RBP15.14■□□□□ 0.01
CLCN2-206ENST00000465231 FRAT1Q92837 279 aaPredicted RBP15.14■□□□□ 0.01
CLCN2-206ENST00000465231 PIM2Q9P1W9 311 aa15.14■□□□□ 0.01
CLCN2-206ENST00000465231 KIF16BQ96L93 1317 aa15.14■□□□□ 0.01
CLCN2-206ENST00000465231 KLRG2A4D1S0 409 aaPredicted RBP15.13■□□□□ 0.01
CLCN2-206ENST00000465231 IRS4O14654 1257 aaPredicted RBP15.13■□□□□ 0.01
CLCN2-206ENST00000465231 NLRP3Q96P20 1036 aa15.13■□□□□ 0.01
CLCN2-206ENST00000465231 UBE3BQ7Z3V4 1068 aa15.12■□□□□ 0.01
CLCN2-206ENST00000465231 MASTLQ96GX5 879 aa15.12■□□□□ 0.01
CLCN2-206ENST00000465231 SRCIN1Q9C0H9 1055 aa15.12■□□□□ 0.01
CLCN2-206ENST00000465231 COL4A1P02462 1669 aa15.12■□□□□ 0.01
CLCN2-206ENST00000465231 H7C1W4 665 aa15.11■□□□□ 0.01
CLCN2-206ENST00000465231 NPR1P16066 1061 aa15.11■□□□□ 0.01
CLCN2-206ENST00000465231 CRY2Q49AN0 593 aa15.11■□□□□ 0.01
CLCN2-206ENST00000465231 DALRD3Q5D0E6 543 aaKnown RBP15.11■□□□□ 0.01
CLCN2-206ENST00000465231 RPGRQ92834 1020 aaKnown RBP15.11■□□□□ 0.01
CLCN2-206ENST00000465231 API5Q9BZZ5 524 aaKnown RBP15.11■□□□□ 0.01
CLCN2-206ENST00000465231 ZNF219Q9P2Y4 722 aaPredicted RBP15.11■□□□□ 0.01
CLCN2-206ENST00000465231 PDZRN3Q9UPQ7 1066 aa15.11■□□□□ 0.01
CLCN2-206ENST00000465231 SPEF2Q9C093 1822 aa15.1■□□□□ 0.01
CLCN2-206ENST00000465231 ALDH1L1O75891 902 aa15.1■□□□□ 0.01
CLCN2-206ENST00000465231 TRIM27P14373 513 aa15.1■□□□□ 0.01
CLCN2-206ENST00000465231 CASP7P55210 303 aa15.1■□□□□ 0.01
CLCN2-206ENST00000465231 STYK1Q6J9G0 422 aa15.1■□□□□ 0.01
CLCN2-206ENST00000465231 SLC51AQ86UW1 340 aa15.1■□□□□ 0.01
CLCN2-206ENST00000465231 TTLL6Q8N841 843 aa15.1■□□□□ 0.01
CLCN2-206ENST00000465231 CLUAP1Q96AJ1 413 aa15.1■□□□□ 0.01
CLCN2-206ENST00000465231 CCDC85AQ96PX6 553 aaPredicted RBP15.1■□□□□ 0.01
CLCN2-206ENST00000465231 RCAN3Q9UKA8 241 aa15.1■□□□□ 0.01
CLCN2-206ENST00000465231 CDHR2Q9BYE9 1310 aa15.1■□□□□ 0.01
CLCN2-206ENST00000465231 DCAF8L1A6NGE4 600 aa15.09■□□□□ 0.01
CLCN2-206ENST00000465231 PRPF40BQ6NWY9 871 aaKnown RBP15.09■□□□□ 0.01
CLCN2-206ENST00000465231 GRM8O00222 908 aa15.08■□□□□ 0
CLCN2-206ENST00000465231 IPO8O15397 1037 aaKnown RBP15.08■□□□□ 0
CLCN2-206ENST00000465231 PDE8AO60658 829 aa15.08■□□□□ 0
CLCN2-206ENST00000465231 ZKSCAN2Q63HK3 967 aa15.08■□□□□ 0
CLCN2-206ENST00000465231 ATF7IPQ6VMQ6 1270 aa15.08■□□□□ 0
CLCN2-206ENST00000465231 ARHGAP45Q92619 1136 aa15.08■□□□□ 0
CLCN2-206ENST00000465231 CNKSR1Q969H4 720 aa15.08■□□□□ 0
CLCN2-206ENST00000465231 C9orf78Q9NZ63 289 aaPredicted RBP15.08■□□□□ 0
CLCN2-206ENST00000465231 ABCC4O15439 1325 aa15.08■□□□□ 0
CLCN2-206ENST00000465231 CCDC88AQ3V6T2 1871 aa15.08■□□□□ 0
CLCN2-206ENST00000465231 C21orf2O43822 256 aa15.07■□□□□ 0
CLCN2-206ENST00000465231 NBPF7P0C2Y1 421 aaPredicted RBP15.07■□□□□ 0
CLCN2-206ENST00000465231 HOXA10P31260 410 aaPredicted RBP15.07■□□□□ 0
CLCN2-206ENST00000465231 SF3B3Q15393 1217 aaKnown RBP15.07■□□□□ 0
CLCN2-206ENST00000465231 OLFM4Q6UX06 510 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms