RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 CC2D2BQ6DHV5 1058 aa19.41■□□□□ 0.7
MCF2L-220ENST00000464800 KIF6Q6ZMV9 814 aa19.41■□□□□ 0.7
MCF2L-220ENST00000464800 NUTM1Q86Y26 1132 aa19.41■□□□□ 0.7
MCF2L-220ENST00000464800 NGEFQ8N5V2 710 aa19.41■□□□□ 0.7
MCF2L-220ENST00000464800 RPGRQ92834 1020 aaKnown RBP19.41■□□□□ 0.7
MCF2L-220ENST00000464800 WBP1LQ9NX94 342 aa19.41■□□□□ 0.7
MCF2L-220ENST00000464800 MIS18AQ9NYP9 233 aa19.41■□□□□ 0.7
MCF2L-220ENST00000464800 TRPM7Q96QT4 1865 aa19.4■□□□□ 0.7
MCF2L-220ENST00000464800 LMOD1P29536 600 aaPredicted RBP19.4■□□□□ 0.7
MCF2L-220ENST00000464800 DEFB115Q30KQ5 88 aa19.4■□□□□ 0.7
MCF2L-220ENST00000464800 ABT1Q9ULW3 272 aaKnown RBP19.4■□□□□ 0.7
MCF2L-220ENST00000464800 GJA3Q9Y6H8 435 aa19.4■□□□□ 0.7
MCF2L-220ENST00000464800 MAP3K15Q6ZN16 1313 aa19.4■□□□□ 0.7
MCF2L-220ENST00000464800 LBX1P52954 281 aa19.39■□□□□ 0.69
MCF2L-220ENST00000464800 PNISRQ8TF01 805 aaKnown RBP19.39■□□□□ 0.69
MCF2L-220ENST00000464800 NEFMP07197 916 aa19.38■□□□□ 0.69
MCF2L-220ENST00000464800 GRIPAP1Q4V328 841 aa19.38■□□□□ 0.69
MCF2L-220ENST00000464800 WDR33Q9C0J8 1336 aaKnown RBP19.38■□□□□ 0.69
MCF2L-220ENST00000464800 UBN2Q6ZU65 1347 aa19.37■□□□□ 0.69
MCF2L-220ENST00000464800 GPTP24298 496 aa19.37■□□□□ 0.69
MCF2L-220ENST00000464800 HOXA10P31260 410 aaPredicted RBP19.37■□□□□ 0.69
MCF2L-220ENST00000464800 LARGE2Q8N3Y3 721 aa19.37■□□□□ 0.69
MCF2L-220ENST00000464800 DDX21Q9NR30 783 aaKnown RBP eCLIP19.37■□□□□ 0.69
MCF2L-220ENST00000464800 RRP7AQ9Y3A4 280 aaKnown RBP19.37■□□□□ 0.69
MCF2L-220ENST00000464800 PPEF1O14829 653 aaPredicted RBP19.36■□□□□ 0.69
MCF2L-220ENST00000464800 HSPA8P11142 646 aaKnown RBP19.36■□□□□ 0.69
MCF2L-220ENST00000464800 MAP2K1Q02750 393 aaPredicted RBP19.36■□□□□ 0.69
MCF2L-220ENST00000464800 TTLL7Q6ZT98 887 aa19.36■□□□□ 0.69
MCF2L-220ENST00000464800 RBM17Q96I25 401 aaKnown RBP19.36■□□□□ 0.69
MCF2L-220ENST00000464800 ZBTB3Q9H5J0 574 aa19.36■□□□□ 0.69
MCF2L-220ENST00000464800 MYL6BP14649 208 aa19.35■□□□□ 0.69
MCF2L-220ENST00000464800 SCNN1DP51172 638 aa19.35■□□□□ 0.69
MCF2L-220ENST00000464800 CRAMP1Q96RY5 1269 aa19.35■□□□□ 0.69
MCF2L-220ENST00000464800 EPS15P42566 896 aa19.34■□□□□ 0.69
MCF2L-220ENST00000464800 EIF4A1P60842 406 aaKnown RBP19.34■□□□□ 0.69
MCF2L-220ENST00000464800 SUSD4Q5VX71 490 aa19.34■□□□□ 0.69
MCF2L-220ENST00000464800 NIM1KQ8IY84 436 aa19.34■□□□□ 0.69
MCF2L-220ENST00000464800 ANKRD36CQ5JPF3 1778 aa19.34■□□□□ 0.69
MCF2L-220ENST00000464800 PAXIP1Q6ZW49 1069 aaPredicted RBP19.33■□□□□ 0.68
MCF2L-220ENST00000464800 LAMB2P55268 1798 aa19.33■□□□□ 0.68
MCF2L-220ENST00000464800 TCERG1O14776 1098 aaKnown RBP19.32■□□□□ 0.68
MCF2L-220ENST00000464800 NTSR2O95665 410 aa19.32■□□□□ 0.68
MCF2L-220ENST00000464800 USP50Q70EL3 339 aaPredicted RBP19.32■□□□□ 0.68
MCF2L-220ENST00000464800 ZNF34Q8IZ26 560 aa19.32■□□□□ 0.68
MCF2L-220ENST00000464800 ERBB4Q15303 1308 aa19.31■□□□□ 0.68
MCF2L-220ENST00000464800 PPIP5K2O43314 1243 aa19.31■□□□□ 0.68
MCF2L-220ENST00000464800 ECE1P42892 770 aa19.31■□□□□ 0.68
MCF2L-220ENST00000464800 GIGYF2Q6Y7W6 1299 aaKnown RBP19.31■□□□□ 0.68
MCF2L-220ENST00000464800 PPP1R42Q7Z4L9 355 aa19.31■□□□□ 0.68
MCF2L-220ENST00000464800 SLC51AQ86UW1 340 aa19.31■□□□□ 0.68
MCF2L-220ENST00000464800 ABHD8Q96I13 439 aa19.31■□□□□ 0.68
MCF2L-220ENST00000464800 CAPNS2Q96L46 248 aa19.31■□□□□ 0.68
MCF2L-220ENST00000464800 THUMPD2Q9BTF0 503 aaKnown RBP19.31■□□□□ 0.68
MCF2L-220ENST00000464800 TMX4Q9H1E5 349 aaPredicted RBP19.31■□□□□ 0.68
MCF2L-220ENST00000464800 FMR1Q06787 632 aaKnown RBP eCLIP19.3■□□□□ 0.68
MCF2L-220ENST00000464800 NFE2L2Q16236 605 aa19.3■□□□□ 0.68
MCF2L-220ENST00000464800 C3orf67Q6ZVT6 689 aa19.3■□□□□ 0.68
MCF2L-220ENST00000464800 BEGAINQ9BUH8 593 aa19.3■□□□□ 0.68
MCF2L-220ENST00000464800 GRM1Q13255 1194 aa19.29■□□□□ 0.68
MCF2L-220ENST00000464800 AOC3Q16853 763 aa19.29■□□□□ 0.68
MCF2L-220ENST00000464800 PARP10Q53GL7 1025 aa19.29■□□□□ 0.68
MCF2L-220ENST00000464800 MAPK8IP3Q9UPT6 1336 aa19.28■□□□□ 0.68
MCF2L-220ENST00000464800 TRAF5O00463 557 aa19.28■□□□□ 0.68
MCF2L-220ENST00000464800 CYP4F22Q6NT55 531 aa19.28■□□□□ 0.68
MCF2L-220ENST00000464800 NLRP3Q96P20 1036 aa19.28■□□□□ 0.68
MCF2L-220ENST00000464800 PLEKHF1Q96S99 279 aa19.28■□□□□ 0.68
MCF2L-220ENST00000464800 VPS33BQ9H267 617 aa19.28■□□□□ 0.68
MCF2L-220ENST00000464800 ADARB2Q9NS39 739 aaKnown RBP19.28■□□□□ 0.68
MCF2L-220ENST00000464800 GPRC5DQ9NZD1 345 aa19.28■□□□□ 0.68
MCF2L-220ENST00000464800 ATP6V0A2Q9Y487 856 aa19.28■□□□□ 0.68
MCF2L-220ENST00000464800 TLL2Q9Y6L7 1015 aa19.28■□□□□ 0.68
MCF2L-220ENST00000464800 CST9Q5W186 159 aa19.27■□□□□ 0.68
MCF2L-220ENST00000464800 SUPT20HQ8NEM7 779 aa19.27■□□□□ 0.68
MCF2L-220ENST00000464800 GPR101Q96P66 508 aaPredicted RBP19.27■□□□□ 0.68
MCF2L-220ENST00000464800 ABCC4O15439 1325 aa19.26■□□□□ 0.67
MCF2L-220ENST00000464800 UTP14AQ9BVJ6 771 aaKnown RBP19.26■□□□□ 0.67
MCF2L-220ENST00000464800 PNNQ9H307 717 aaKnown RBP19.26■□□□□ 0.67
MCF2L-220ENST00000464800 TSPYL4Q9UJ04 414 aa19.26■□□□□ 0.67
MCF2L-220ENST00000464800 ZNRF3Q9ULT6 936 aa19.25■□□□□ 0.67
MCF2L-220ENST00000464800 CXCL9Q07325 125 aa19.24■□□□□ 0.67
MCF2L-220ENST00000464800 SLC10A5Q5PT55 438 aa19.24■□□□□ 0.67
MCF2L-220ENST00000464800 RTFDC1Q9BY42 306 aaPredicted RBP19.24■□□□□ 0.67
MCF2L-220ENST00000464800 CDHR2Q9BYE9 1310 aa19.24■□□□□ 0.67
MCF2L-220ENST00000464800 LRRC37AA6NMS7 1700 aa19.23■□□□□ 0.67
MCF2L-220ENST00000464800 GMPSP49915 693 aaPredicted RBP19.23■□□□□ 0.67
MCF2L-220ENST00000464800 DPP8Q6V1X1 898 aaPredicted RBP19.23■□□□□ 0.67
MCF2L-220ENST00000464800 LRP10Q7Z4F1 713 aa19.23■□□□□ 0.67
MCF2L-220ENST00000464800 TAF1P21675 1872 aa19.22■□□□□ 0.67
MCF2L-220ENST00000464800 CELF2O95319 508 aaKnown RBP19.22■□□□□ 0.67
MCF2L-220ENST00000464800 EIF2S2P20042 333 aaKnown RBP19.22■□□□□ 0.67
MCF2L-220ENST00000464800 MAP2K2P36507 400 aa19.22■□□□□ 0.67
MCF2L-220ENST00000464800 FAM161AQ3B820 660 aa19.22■□□□□ 0.67
MCF2L-220ENST00000464800 AOC2O75106 756 aa19.21■□□□□ 0.67
MCF2L-220ENST00000464800 BBOX1O75936 387 aa19.21■□□□□ 0.67
MCF2L-220ENST00000464800 KIAA2012Q0VF49 1180 aa19.21■□□□□ 0.67
MCF2L-220ENST00000464800 PDIA6Q15084 440 aa19.21■□□□□ 0.67
MCF2L-220ENST00000464800 PROSER3Q2NL68 480 aa19.21■□□□□ 0.67
MCF2L-220ENST00000464800 CIAPIN1Q6FI81 312 aa19.21■□□□□ 0.67
MCF2L-220ENST00000464800 SAPCD2Q86UD0 394 aa19.21■□□□□ 0.67
MCF2L-220ENST00000464800 SP8Q8IXZ3 490 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms