RNA–Protein interactions for RNA: ENST00000464605.1

UBA3-206, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 431 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-206ENST00000464605 CRY2Q49AN0 593 aa28.64■■■□□ 2.18
UBA3-206ENST00000464605 PPP1R42Q7Z4L9 355 aa28.64■■■□□ 2.18
UBA3-206ENST00000464605 NLRP10Q86W26 655 aa28.64■■■□□ 2.18
UBA3-206ENST00000464605 LAMB2P55268 1798 aa28.64■■■□□ 2.18
UBA3-206ENST00000464605 FANCIQ9NVI1 1328 aa28.64■■■□□ 2.17
UBA3-206ENST00000464605 PRPF40BQ6NWY9 871 aaKnown RBP28.63■■■□□ 2.17
UBA3-206ENST00000464605 C21orf2O43822 256 aa28.62■■■□□ 2.17
UBA3-206ENST00000464605 RASSF7Q02833 373 aa28.62■■■□□ 2.17
UBA3-206ENST00000464605 CCDC30Q5VVM6 783 aa28.62■■■□□ 2.17
UBA3-206ENST00000464605 C7orf43Q8WVR3 580 aa28.62■■■□□ 2.17
UBA3-206ENST00000464605 UTP14AQ9BVJ6 771 aaKnown RBP28.62■■■□□ 2.17
UBA3-206ENST00000464605 DICER1Q9UPY3 1922 aaKnown RBP28.62■■■□□ 2.17
UBA3-206ENST00000464605 NFKBIEO00221 500 aa28.61■■■□□ 2.17
UBA3-206ENST00000464605 HSPA6P17066 643 aa28.61■■■□□ 2.17
UBA3-206ENST00000464605 TWISTNBQ3B726 338 aaPredicted RBP28.61■■■□□ 2.17
UBA3-206ENST00000464605 SLC10A5Q5PT55 438 aa28.61■■■□□ 2.17
UBA3-206ENST00000464605 C3orf67Q6ZVT6 689 aa28.61■■■□□ 2.17
UBA3-206ENST00000464605 ISCA1Q9BUE6 129 aa28.61■■■□□ 2.17
UBA3-206ENST00000464605 RNF181Q9P0P0 153 aa28.61■■■□□ 2.17
UBA3-206ENST00000464605 ZNF521Q96K83 1311 aa28.61■■■□□ 2.17
UBA3-206ENST00000464605 CCER2I3L3R5 266 aa28.6■■■□□ 2.17
UBA3-206ENST00000464605 NMRK2Q9NPI5 230 aa28.6■■■□□ 2.17
UBA3-206ENST00000464605 ZNF219Q9P2Y4 722 aaPredicted RBP28.6■■■□□ 2.17
UBA3-206ENST00000464605 SYNE4Q8N205 404 aa28.59■■■□□ 2.17
UBA3-206ENST00000464605 CHMP4AQ9BY43 222 aa28.58■■■□□ 2.17
UBA3-206ENST00000464605 DDX60Q8IY21 1712 aaKnown RBP28.57■■■□□ 2.16
UBA3-206ENST00000464605 RNF123Q5XPI4 1314 aa28.57■■■□□ 2.16
UBA3-206ENST00000464605 ATP5J2-PTCD1G3V325 749 aa28.56■■■□□ 2.16
UBA3-206ENST00000464605 TCERG1O14776 1098 aaKnown RBP28.56■■■□□ 2.16
UBA3-206ENST00000464605 TOMM70O94826 608 aa28.56■■■□□ 2.16
UBA3-206ENST00000464605 HOXA10P31260 410 aaPredicted RBP28.56■■■□□ 2.16
UBA3-206ENST00000464605 VAMP4O75379 141 aa28.55■■■□□ 2.16
UBA3-206ENST00000464605 EXOSC9Q06265 439 aaKnown RBP28.55■■■□□ 2.16
UBA3-206ENST00000464605 TRIM28Q13263 835 aaKnown RBP28.55■■■□□ 2.16
UBA3-206ENST00000464605 ZNF428Q96B54 188 aa28.55■■■□□ 2.16
UBA3-206ENST00000464605 TAF1P21675 1872 aa28.55■■■□□ 2.16
UBA3-206ENST00000464605 LMNB1P20700 586 aa28.54■■■□□ 2.16
UBA3-206ENST00000464605 ALDH1B1P30837 517 aa28.54■■■□□ 2.16
UBA3-206ENST00000464605 GOLGA2Q08379 1002 aa28.54■■■□□ 2.16
UBA3-206ENST00000464605 RIC3Q7Z5B4 369 aa28.54■■■□□ 2.16
UBA3-206ENST00000464605 TRMT112Q9UI30 125 aaKnown RBP28.54■■■□□ 2.16
UBA3-206ENST00000464605 OLFM4Q6UX06 510 aa28.53■■■□□ 2.16
UBA3-206ENST00000464605 TIAM2Q8IVF5 1701 aa28.52■■■□□ 2.16
UBA3-206ENST00000464605 SH3TC1Q8TE82 1336 aa28.52■■■□□ 2.16
UBA3-206ENST00000464605 LTBP3Q9NS15 1303 aa28.52■■■□□ 2.16
UBA3-206ENST00000464605 G2E3Q7L622 706 aa28.52■■■□□ 2.16
UBA3-206ENST00000464605 NLRP3Q96P20 1036 aa28.52■■■□□ 2.16
UBA3-206ENST00000464605 KDM2BQ8NHM5 1336 aa28.51■■■□□ 2.15
UBA3-206ENST00000464605 ZC3H4Q9UPT8 1303 aaKnown RBP28.51■■■□□ 2.15
UBA3-206ENST00000464605 CEP350Q5VT06 3117 aa28.51■■■□□ 2.15
UBA3-206ENST00000464605 HCLS1P14317 486 aaPredicted RBP28.51■■■□□ 2.15
UBA3-206ENST00000464605 SNED1Q8TER0 1413 aa28.51■■■□□ 2.15
UBA3-206ENST00000464605 SOGA3Q5TF21 947 aa28.5■■■□□ 2.15
UBA3-206ENST00000464605 RPGRQ92834 1020 aaKnown RBP28.5■■■□□ 2.15
UBA3-206ENST00000464605 CRAMP1Q96RY5 1269 aa28.5■■■□□ 2.15
UBA3-206ENST00000464605 STK31Q9BXU1 1019 aa28.5■■■□□ 2.15
UBA3-206ENST00000464605 SLC4A2P04920 1241 aa28.49■■■□□ 2.15
UBA3-206ENST00000464605 MYH16Q9H6N6 1097 aa28.49■■■□□ 2.15
UBA3-206ENST00000464605 CCDC93Q567U6 631 aa28.48■■■□□ 2.15
UBA3-206ENST00000464605 FAM89AQ96GI7 184 aa28.48■■■□□ 2.15
UBA3-206ENST00000464605 RBM17Q96I25 401 aaKnown RBP28.48■■■□□ 2.15
UBA3-206ENST00000464605 MYD88Q99836 296 aa28.48■■■□□ 2.15
UBA3-206ENST00000464605 METTL22Q9BUU2 404 aaPredicted RBP28.48■■■□□ 2.15
UBA3-206ENST00000464605 TAOK3Q9H2K8 898 aa28.48■■■□□ 2.15
UBA3-206ENST00000464605 DDX58O95786 925 aaKnown RBP28.47■■■□□ 2.15
UBA3-206ENST00000464605 KSR2Q6VAB6 950 aa28.47■■■□□ 2.15
UBA3-206ENST00000464605 SLC51AQ86UW1 340 aa28.47■■■□□ 2.15
UBA3-206ENST00000464605 RBM46Q8TBY0 533 aaKnown RBP28.47■■■□□ 2.15
UBA3-206ENST00000464605 MAP3K2Q9Y2U5 619 aa28.47■■■□□ 2.15
UBA3-206ENST00000464605 PI4KAP2A4QPH2 592 aa28.46■■■□□ 2.15
UBA3-206ENST00000464605 PI4KAP1Q8N8J0 262 aa28.46■■■□□ 2.15
UBA3-206ENST00000464605 DIEXFQ68CQ4 756 aaKnown RBP28.45■■■□□ 2.14
UBA3-206ENST00000464605 RRAGCQ9HB90 399 aa28.45■■■□□ 2.14
UBA3-206ENST00000464605 CCDC191Q8NCU4 936 aa28.44■■■□□ 2.14
UBA3-206ENST00000464605 ABCC4O15439 1325 aa28.43■■■□□ 2.14
UBA3-206ENST00000464605 RTKN2Q8IZC4 609 aa28.43■■■□□ 2.14
UBA3-206ENST00000464605 MIER1Q8N108 512 aa28.43■■■□□ 2.14
UBA3-206ENST00000464605 IGKV5-2P06315 115 aa28.42■■■□□ 2.14
UBA3-206ENST00000464605 APLP1P51693 650 aa28.42■■■□□ 2.14
UBA3-206ENST00000464605 FKBP4Q02790 459 aaKnown RBP eCLIP28.42■■■□□ 2.14
UBA3-206ENST00000464605 FLIIQ13045 1269 aa28.42■■■□□ 2.14
UBA3-206ENST00000464605 RTL5Q5HYW3 569 aaPredicted RBP28.42■■■□□ 2.14
UBA3-206ENST00000464605 C16orf71Q8IYS4 520 aaPredicted RBP28.42■■■□□ 2.14
UBA3-206ENST00000464605 ZBTB38Q8NAP3 1195 aaPredicted RBP28.42■■■□□ 2.14
UBA3-206ENST00000464605 GLTPD2A6NH11 291 aa28.41■■■□□ 2.14
UBA3-206ENST00000464605 SF3B3Q15393 1217 aaKnown RBP28.41■■■□□ 2.14
UBA3-206ENST00000464605 COL4A1P02462 1669 aa28.4■■■□□ 2.14
UBA3-206ENST00000464605 IRS4O14654 1257 aaPredicted RBP28.4■■■□□ 2.14
UBA3-206ENST00000464605 PPEF1O14829 653 aaPredicted RBP28.4■■■□□ 2.14
UBA3-206ENST00000464605 CC2D2BQ6DHV5 1058 aa28.4■■■□□ 2.14
UBA3-206ENST00000464605 CWC25Q9NXE8 425 aaPredicted RBP28.4■■■□□ 2.14
UBA3-206ENST00000464605 PCCAP05165 728 aaPredicted RBP28.39■■■□□ 2.14
UBA3-206ENST00000464605 SLFN5Q08AF3 891 aa28.39■■■□□ 2.14
UBA3-206ENST00000464605 MYH3P11055 1940 aa28.38■■■□□ 2.13
UBA3-206ENST00000464605 FSTL1Q12841 308 aa28.38■■■□□ 2.13
UBA3-206ENST00000464605 JARID2Q92833 1246 aaPredicted RBP28.38■■■□□ 2.13
UBA3-206ENST00000464605 PSMD1Q99460 953 aa28.38■■■□□ 2.13
UBA3-206ENST00000464605 ZNF277Q9NRM2 450 aaPredicted RBP28.38■■■□□ 2.13
UBA3-206ENST00000464605 E9PSI1 815 aa28.37■■■□□ 2.13
UBA3-206ENST00000464605 CDCA7LQ96GN5 454 aa28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms