RNA–Protein interactions for RNA: ENST00000464576.1

PTPN18-209, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 5

Gene PTPN18, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-209ENST00000464576 EPHX2P34913 555 aa12.39□□□□□ -0.43
PTPN18-209ENST00000464576 RIPK4P57078 832 aa12.39□□□□□ -0.43
PTPN18-209ENST00000464576 LMOD3Q0VAK6 560 aa12.39□□□□□ -0.43
PTPN18-209ENST00000464576 TTLL7Q6ZT98 887 aa12.39□□□□□ -0.43
PTPN18-209ENST00000464576 GPC2Q8N158 579 aa12.39□□□□□ -0.43
PTPN18-209ENST00000464576 AIDAQ96BJ3 306 aa12.39□□□□□ -0.43
PTPN18-209ENST00000464576 NLRP3Q96P20 1036 aa12.39□□□□□ -0.43
PTPN18-209ENST00000464576 PLEKHF1Q96S99 279 aa12.39□□□□□ -0.43
PTPN18-209ENST00000464576 ERBB4Q15303 1308 aa12.38□□□□□ -0.43
PTPN18-209ENST00000464576 TMEM88BA6NKF7 163 aa12.38□□□□□ -0.43
PTPN18-209ENST00000464576 PARP10Q53GL7 1025 aa12.38□□□□□ -0.43
PTPN18-209ENST00000464576 LARGE2Q8N3Y3 721 aa12.38□□□□□ -0.43
PTPN18-209ENST00000464576 PSMD1Q99460 953 aa12.38□□□□□ -0.43
PTPN18-209ENST00000464576 ZNF541Q9H0D2 1346 aa12.37□□□□□ -0.43
PTPN18-209ENST00000464576 PPEF1O14829 653 aaPredicted RBP12.37□□□□□ -0.43
PTPN18-209ENST00000464576 RALBP1Q15311 655 aa12.37□□□□□ -0.43
PTPN18-209ENST00000464576 CRY2Q49AN0 593 aa12.37□□□□□ -0.43
PTPN18-209ENST00000464576 SUSD4Q5VX71 490 aa12.37□□□□□ -0.43
PTPN18-209ENST00000464576 GIGYF2Q6Y7W6 1299 aaKnown RBP12.37□□□□□ -0.43
PTPN18-209ENST00000464576 RNF123Q5XPI4 1314 aa12.37□□□□□ -0.43
PTPN18-209ENST00000464576 ABCC12Q96J65 1359 aa12.36□□□□□ -0.43
PTPN18-209ENST00000464576 IBTKQ9P2D0 1353 aaPredicted RBP12.36□□□□□ -0.43
PTPN18-209ENST00000464576 FZD9O00144 591 aa12.36□□□□□ -0.43
PTPN18-209ENST00000464576 HOXA10P31260 410 aaPredicted RBP12.36□□□□□ -0.43
PTPN18-209ENST00000464576 NEUROD2Q15784 382 aa12.36□□□□□ -0.43
PTPN18-209ENST00000464576 NIM1KQ8IY84 436 aa12.36□□□□□ -0.43
PTPN18-209ENST00000464576 CRAMP1Q96RY5 1269 aa12.36□□□□□ -0.43
PTPN18-209ENST00000464576 UTP14AQ9BVJ6 771 aaKnown RBP12.36□□□□□ -0.43
PTPN18-209ENST00000464576 AIMP1Q12904 312 aaKnown RBP12.35□□□□□ -0.43
PTPN18-209ENST00000464576 HSP90AB3PQ58FF7 597 aa12.35□□□□□ -0.43
PTPN18-209ENST00000464576 ZNF34Q8IZ26 560 aa12.35□□□□□ -0.43
PTPN18-209ENST00000464576 CNTROBQ8N137 903 aa12.35□□□□□ -0.43
PTPN18-209ENST00000464576 NECTIN2Q92692 538 aa12.35□□□□□ -0.43
PTPN18-209ENST00000464576 BABAM1Q9NWV8 329 aa12.35□□□□□ -0.43
PTPN18-209ENST00000464576 ABT1Q9ULW3 272 aaKnown RBP12.35□□□□□ -0.43
PTPN18-209ENST00000464576 LAS1LQ9Y4W2 734 aaKnown RBP12.35□□□□□ -0.43
PTPN18-209ENST00000464576 UBN2Q6ZU65 1347 aa12.35□□□□□ -0.43
PTPN18-209ENST00000464576 PPIP5K2O43314 1243 aa12.34□□□□□ -0.43
PTPN18-209ENST00000464576 WDR43Q15061 677 aaKnown RBP eCLIP12.34□□□□□ -0.43
PTPN18-209ENST00000464576 MAP1SQ66K74 1059 aaPredicted RBP12.34□□□□□ -0.43
PTPN18-209ENST00000464576 SUPT20HQ8NEM7 779 aa12.34□□□□□ -0.43
PTPN18-209ENST00000464576 PASKQ96RG2 1323 aa12.34□□□□□ -0.43
PTPN18-209ENST00000464576 CNTNAP1P78357 1384 aa12.33□□□□□ -0.44
PTPN18-209ENST00000464576 NTSR2O95665 410 aa12.33□□□□□ -0.44
PTPN18-209ENST00000464576 ITGBL1O95965 494 aaPredicted RBP12.33□□□□□ -0.44
PTPN18-209ENST00000464576 DEFB115Q30KQ5 88 aa12.33□□□□□ -0.44
PTPN18-209ENST00000464576 PAXIP1Q6ZW49 1069 aaPredicted RBP12.33□□□□□ -0.44
PTPN18-209ENST00000464576 DDX46Q7L014 1031 aaKnown RBP12.33□□□□□ -0.44
PTPN18-209ENST00000464576 RIC1Q4ADV7 1423 aa12.33□□□□□ -0.44
PTPN18-209ENST00000464576 BBOX1O75936 387 aa12.32□□□□□ -0.44
PTPN18-209ENST00000464576 TMPOP42166 694 aaKnown RBP12.32□□□□□ -0.44
PTPN18-209ENST00000464576 VEGFBP49765 207 aa12.32□□□□□ -0.44
PTPN18-209ENST00000464576 DPP8Q6V1X1 898 aaPredicted RBP12.32□□□□□ -0.44
PTPN18-209ENST00000464576 COPS6Q7L5N1 327 aa12.32□□□□□ -0.44
PTPN18-209ENST00000464576 VPS33BQ9H267 617 aa12.32□□□□□ -0.44
PTPN18-209ENST00000464576 TRMT112Q9UI30 125 aaKnown RBP12.32□□□□□ -0.44
PTPN18-209ENST00000464576 ANXA1P04083 346 aa12.31□□□□□ -0.44
PTPN18-209ENST00000464576 CTCFP49711 727 aaPredicted RBP12.31□□□□□ -0.44
PTPN18-209ENST00000464576 USP50Q70EL3 339 aaPredicted RBP12.31□□□□□ -0.44
PTPN18-209ENST00000464576 CCDC146Q8IYE0 955 aa12.31□□□□□ -0.44
PTPN18-209ENST00000464576 XAGE3Q8WTP9 111 aa12.31□□□□□ -0.44
PTPN18-209ENST00000464576 BEGAINQ9BUH8 593 aa12.31□□□□□ -0.44
PTPN18-209ENST00000464576 ATP6V0A2Q9Y487 856 aa12.31□□□□□ -0.44
PTPN18-209ENST00000464576 ANKRD36CQ5JPF3 1778 aa12.3□□□□□ -0.44
PTPN18-209ENST00000464576 HCLS1P14317 486 aaPredicted RBP12.3□□□□□ -0.44
PTPN18-209ENST00000464576 EPS15P42566 896 aa12.3□□□□□ -0.44
PTPN18-209ENST00000464576 DDX10Q13206 875 aaKnown RBP12.3□□□□□ -0.44
PTPN18-209ENST00000464576 GRM1Q13255 1194 aa12.3□□□□□ -0.44
PTPN18-209ENST00000464576 AOC3Q16853 763 aa12.3□□□□□ -0.44
PTPN18-209ENST00000464576 SLC10A5Q5PT55 438 aa12.3□□□□□ -0.44
PTPN18-209ENST00000464576 MPNDQ8N594 471 aa12.3□□□□□ -0.44
PTPN18-209ENST00000464576 BCL2L13Q9BXK5 485 aa12.3□□□□□ -0.44
PTPN18-209ENST00000464576 DDX21Q9NR30 783 aaKnown RBP eCLIP12.3□□□□□ -0.44
PTPN18-209ENST00000464576 ZNRF3Q9ULT6 936 aa12.3□□□□□ -0.44
PTPN18-209ENST00000464576 ABCC4O15439 1325 aa12.3□□□□□ -0.44
PTPN18-209ENST00000464576 FOXN1O15353 648 aa12.29□□□□□ -0.44
PTPN18-209ENST00000464576 MAP2K1Q02750 393 aaPredicted RBP12.29□□□□□ -0.44
PTPN18-209ENST00000464576 TNIP1Q15025 636 aa12.29□□□□□ -0.44
PTPN18-209ENST00000464576 PDIA6Q15084 440 aa12.29□□□□□ -0.44
PTPN18-209ENST00000464576 PROSER3Q2NL68 480 aa12.29□□□□□ -0.44
PTPN18-209ENST00000464576 C3orf67Q6ZVT6 689 aa12.29□□□□□ -0.44
PTPN18-209ENST00000464576 NLRP10Q86W26 655 aa12.29□□□□□ -0.44
PTPN18-209ENST00000464576 SP8Q8IXZ3 490 aa12.29□□□□□ -0.44
PTPN18-209ENST00000464576 RUNDC1Q96C34 613 aa12.29□□□□□ -0.44
PTPN18-209ENST00000464576 ADARB2Q9NS39 739 aaKnown RBP12.29□□□□□ -0.44
PTPN18-209ENST00000464576 SH3TC1Q8TE82 1336 aa12.29□□□□□ -0.44
PTPN18-209ENST00000464576 MYBBP1AQ9BQG0 1328 aaKnown RBP12.29□□□□□ -0.44
PTPN18-209ENST00000464576 RASSF10A6NK89 507 aa12.28□□□□□ -0.44
PTPN18-209ENST00000464576 ECE1P42892 770 aa12.28□□□□□ -0.44
PTPN18-209ENST00000464576 SCNN1DP51172 638 aa12.28□□□□□ -0.44
PTPN18-209ENST00000464576 TCIRG1Q13488 830 aa12.28□□□□□ -0.44
PTPN18-209ENST00000464576 HDGFL1Q5TGJ6 251 aa12.28□□□□□ -0.44
PTPN18-209ENST00000464576 TMC4Q7Z404 712 aa12.28□□□□□ -0.44
PTPN18-209ENST00000464576 PRDM10Q9NQV6 1147 aa12.28□□□□□ -0.44
PTPN18-209ENST00000464576 WDR33Q9C0J8 1336 aaKnown RBP12.28□□□□□ -0.44
PTPN18-209ENST00000464576 ADAMTSL1Q8N6G6 1762 aa12.28□□□□□ -0.44
PTPN18-209ENST00000464576 TRPM7Q96QT4 1865 aa12.27□□□□□ -0.44
PTPN18-209ENST00000464576 GRAPQ13588 217 aa12.27□□□□□ -0.45
PTPN18-209ENST00000464576 CIAPIN1Q6FI81 312 aa12.27□□□□□ -0.45
PTPN18-209ENST00000464576 ANKRD13DQ6ZTN6 518 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms