RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 GPR152Q8TDT2 470 aa6.25□□□□□ -1.41
HMGXB4-205ENST00000464480 NUDT16Q96DE0 195 aaKnown RBP6.25□□□□□ -1.41
HMGXB4-205ENST00000464480 CEP63Q96MT8 703 aa6.25□□□□□ -1.41
HMGXB4-205ENST00000464480 FAM129BQ96TA1 746 aa6.25□□□□□ -1.41
HMGXB4-205ENST00000464480 BCL2L13Q9BXK5 485 aa6.25□□□□□ -1.41
HMGXB4-205ENST00000464480 DMGDHQ9UI17 866 aaKnown RBP6.25□□□□□ -1.41
HMGXB4-205ENST00000464480 SLC35F4A4IF30 521 aa6.24□□□□□ -1.41
HMGXB4-205ENST00000464480 TERTO14746 1132 aaKnown RBP6.24□□□□□ -1.41
HMGXB4-205ENST00000464480 RANGAP1P46060 587 aaPredicted RBP6.24□□□□□ -1.41
HMGXB4-205ENST00000464480 RBM25P49756 843 aaKnown RBP6.24□□□□□ -1.41
HMGXB4-205ENST00000464480 KLRG1Q96E93 195 aa6.24□□□□□ -1.41
HMGXB4-205ENST00000464480 BCL11AQ9H165 835 aa6.24□□□□□ -1.41
HMGXB4-205ENST00000464480 NUCKS1Q9H1E3 243 aaKnown RBP6.24□□□□□ -1.41
HMGXB4-205ENST00000464480 NXF1Q9UBU9 619 aaKnown RBP6.24□□□□□ -1.41
HMGXB4-205ENST00000464480 FNDC3AQ9Y2H6 1198 aaKnown RBP6.24□□□□□ -1.41
HMGXB4-205ENST00000464480 RBM47A0AV96 593 aaKnown RBP6.23□□□□□ -1.41
HMGXB4-205ENST00000464480 GPR182O15218 404 aa6.23□□□□□ -1.41
HMGXB4-205ENST00000464480 TREHO43280 583 aa6.23□□□□□ -1.41
HMGXB4-205ENST00000464480 INPP5BP32019 993 aa6.23□□□□□ -1.41
HMGXB4-205ENST00000464480 C8orf34Q49A92 452 aa6.23□□□□□ -1.41
HMGXB4-205ENST00000464480 EAPPQ56P03 285 aaPredicted RBP6.23□□□□□ -1.41
HMGXB4-205ENST00000464480 ALKBH8Q96BT7 664 aaKnown RBP6.23□□□□□ -1.41
HMGXB4-205ENST00000464480 BRD7Q9NPI1 651 aa6.23□□□□□ -1.41
HMGXB4-205ENST00000464480 OPLAHO14841 1288 aa6.22□□□□□ -1.41
HMGXB4-205ENST00000464480 NEFLP07196 543 aa6.22□□□□□ -1.41
HMGXB4-205ENST00000464480 FAM157BP0CG42 384 aa6.22□□□□□ -1.41
HMGXB4-205ENST00000464480 FGD1P98174 961 aa6.22□□□□□ -1.41
HMGXB4-205ENST00000464480 FMR1Q06787 632 aaKnown RBP eCLIP6.22□□□□□ -1.41
HMGXB4-205ENST00000464480 ZNF326Q5BKZ1 582 aaKnown RBP6.22□□□□□ -1.41
HMGXB4-205ENST00000464480 CMTR1Q8N1G2 835 aaKnown RBP6.22□□□□□ -1.41
HMGXB4-205ENST00000464480 CCDC155Q8N6L0 562 aa6.22□□□□□ -1.41
HMGXB4-205ENST00000464480 GIPC2Q8TF65 315 aa6.22□□□□□ -1.41
HMGXB4-205ENST00000464480 GMCL1Q96IK5 515 aa6.22□□□□□ -1.41
HMGXB4-205ENST00000464480 RTCBQ9Y3I0 505 aaKnown RBP6.22□□□□□ -1.41
HMGXB4-205ENST00000464480 ATXN7O15265 892 aaPredicted RBP6.21□□□□□ -1.42
HMGXB4-205ENST00000464480 MAPK8P45983 427 aa6.21□□□□□ -1.42
HMGXB4-205ENST00000464480 PLCB3Q01970 1234 aa6.21□□□□□ -1.42
HMGXB4-205ENST00000464480 TRIM22Q8IYM9 498 aa6.21□□□□□ -1.42
HMGXB4-205ENST00000464480 IRF7Q92985 503 aa6.21□□□□□ -1.42
HMGXB4-205ENST00000464480 ZCCHC2Q9C0B9 1178 aaKnown RBP6.21□□□□□ -1.42
HMGXB4-205ENST00000464480 C11orf16Q9NQ32 467 aa6.21□□□□□ -1.42
HMGXB4-205ENST00000464480 PCDHGC4Q9Y5F7 938 aa6.21□□□□□ -1.42
HMGXB4-205ENST00000464480 DCDC2BA2VCK2 349 aa6.2□□□□□ -1.42
HMGXB4-205ENST00000464480 UBAP1LF5GYI3 381 aa6.2□□□□□ -1.42
HMGXB4-205ENST00000464480 IGHA2P01877 340 aa6.2□□□□□ -1.42
HMGXB4-205ENST00000464480 P4HBP07237 508 aaKnown RBP6.2□□□□□ -1.42
HMGXB4-205ENST00000464480 ITGA6P23229 1130 aa6.2□□□□□ -1.42
HMGXB4-205ENST00000464480 ATP2B2Q01814 1243 aa6.2□□□□□ -1.42
HMGXB4-205ENST00000464480 LAMC2Q13753 1193 aa6.2□□□□□ -1.42
HMGXB4-205ENST00000464480 DSC3Q14574 896 aa6.2□□□□□ -1.42
HMGXB4-205ENST00000464480 PDE12Q6L8Q7 609 aaKnown RBP6.2□□□□□ -1.42
HMGXB4-205ENST00000464480 ZNF438Q7Z4V0 828 aa6.2□□□□□ -1.42
HMGXB4-205ENST00000464480 FBXO33Q7Z6M2 555 aa6.2□□□□□ -1.42
HMGXB4-205ENST00000464480 NIF3L1Q9GZT8 377 aa6.2□□□□□ -1.42
HMGXB4-205ENST00000464480 KHNYNO15037 678 aaKnown RBP6.19□□□□□ -1.42
HMGXB4-205ENST00000464480 XYLBO75191 536 aa6.19□□□□□ -1.42
HMGXB4-205ENST00000464480 ZNF16P17020 682 aaPredicted RBP6.19□□□□□ -1.42
HMGXB4-205ENST00000464480 KCNQ4P56696 695 aa6.19□□□□□ -1.42
HMGXB4-205ENST00000464480 NFX1Q12986 1120 aaKnown RBP6.19□□□□□ -1.42
HMGXB4-205ENST00000464480 TRIP4Q15650 581 aaPredicted RBP6.19□□□□□ -1.42
HMGXB4-205ENST00000464480 ZNF428Q96B54 188 aa6.19□□□□□ -1.42
HMGXB4-205ENST00000464480 ZNF837Q96EG3 531 aaPredicted RBP6.19□□□□□ -1.42
HMGXB4-205ENST00000464480 GGNBP2Q9H3C7 697 aa6.19□□□□□ -1.42
HMGXB4-205ENST00000464480 PHF24Q9UPV7 400 aa6.19□□□□□ -1.42
HMGXB4-205ENST00000464480 KCNH4Q9UQ05 1017 aa6.19□□□□□ -1.42
HMGXB4-205ENST00000464480 USP20Q9Y2K6 914 aa6.19□□□□□ -1.42
HMGXB4-205ENST00000464480 KCNMB2Q9Y691 235 aa6.19□□□□□ -1.42
HMGXB4-205ENST00000464480 A6NHS1 94 aa6.18□□□□□ -1.42
HMGXB4-205ENST00000464480 EFSO43281 561 aa6.18□□□□□ -1.42
HMGXB4-205ENST00000464480 EGFRP00533 1210 aa6.18□□□□□ -1.42
HMGXB4-205ENST00000464480 THBS1P07996 1170 aa6.18□□□□□ -1.42
HMGXB4-205ENST00000464480 FOXR1Q6PIV2 292 aa6.18□□□□□ -1.42
HMGXB4-205ENST00000464480 XKR5Q6UX68 686 aa6.18□□□□□ -1.42
HMGXB4-205ENST00000464480 SNX29Q8TEQ0 813 aa6.18□□□□□ -1.42
HMGXB4-205ENST00000464480 TRERF1Q96PN7 1200 aa6.18□□□□□ -1.42
HMGXB4-205ENST00000464480 DNAJC25Q9H1X3 360 aa6.18□□□□□ -1.42
HMGXB4-205ENST00000464480 E9PSI1 815 aa6.17□□□□□ -1.42
HMGXB4-205ENST00000464480 H3BM21 787 aa6.17□□□□□ -1.42
HMGXB4-205ENST00000464480 LDHBP07195 334 aaKnown RBP6.17□□□□□ -1.42
HMGXB4-205ENST00000464480 MAPTP10636 758 aaKnown RBP6.17□□□□□ -1.42
HMGXB4-205ENST00000464480 ITGAEP38570 1179 aa6.17□□□□□ -1.42
HMGXB4-205ENST00000464480 INSM1Q01101 510 aaPredicted RBP6.17□□□□□ -1.42
HMGXB4-205ENST00000464480 UBAP2LQ14157 1087 aaKnown RBP6.17□□□□□ -1.42
HMGXB4-205ENST00000464480 DBN1Q16643 649 aa6.17□□□□□ -1.42
HMGXB4-205ENST00000464480 CUEDC1Q9NWM3 386 aaPredicted RBP6.17□□□□□ -1.42
HMGXB4-205ENST00000464480 MARK1Q9P0L2 795 aa6.17□□□□□ -1.42
HMGXB4-205ENST00000464480 ATXN7L1Q9ULK2 861 aaPredicted RBP6.17□□□□□ -1.42
HMGXB4-205ENST00000464480 PNMA6FA0A0J9YX94 578 aa6.16□□□□□ -1.42
HMGXB4-205ENST00000464480 CDC14CA4D256 554 aa6.16□□□□□ -1.42
HMGXB4-205ENST00000464480 EIF1AYO14602 144 aaKnown RBP6.16□□□□□ -1.42
HMGXB4-205ENST00000464480 BNIP3LO60238 219 aa6.16□□□□□ -1.42
HMGXB4-205ENST00000464480 CPNE3O75131 537 aaKnown RBP6.16□□□□□ -1.42
HMGXB4-205ENST00000464480 PPFIA3O75145 1194 aa6.16□□□□□ -1.42
HMGXB4-205ENST00000464480 PHACTR2O75167 634 aa6.16□□□□□ -1.42
HMGXB4-205ENST00000464480 PRPF40AO75400 957 aaKnown RBP6.16□□□□□ -1.42
HMGXB4-205ENST00000464480 TNFRSF21O75509 655 aa6.16□□□□□ -1.42
HMGXB4-205ENST00000464480 GRNP28799 593 aaKnown RBP6.16□□□□□ -1.42
HMGXB4-205ENST00000464480 TNP2Q05952 138 aa6.16□□□□□ -1.42
HMGXB4-205ENST00000464480 ORC1Q13415 861 aa6.16□□□□□ -1.42
HMGXB4-205ENST00000464480 CCINQ13939 588 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms