RNA–Protein interactions for RNA: ENST00000464255.1

CTDSP1-206, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-206ENST00000464255 RBM46Q8TBY0 533 aaKnown RBP17.06■□□□□ 0.32
CTDSP1-206ENST00000464255 IFT57Q9NWB7 429 aa17.06■□□□□ 0.32
CTDSP1-206ENST00000464255 CACNA1SQ13698 1873 aa17.05■□□□□ 0.32
CTDSP1-206ENST00000464255 ALDH1B1P30837 517 aa17.05■□□□□ 0.32
CTDSP1-206ENST00000464255 TCIRG1Q13488 830 aa17.05■□□□□ 0.32
CTDSP1-206ENST00000464255 HDGFL1Q5TGJ6 251 aa17.05■□□□□ 0.32
CTDSP1-206ENST00000464255 NLRP10Q86W26 655 aa17.05■□□□□ 0.32
CTDSP1-206ENST00000464255 SYNE4Q8N205 404 aa17.05■□□□□ 0.32
CTDSP1-206ENST00000464255 DICER1Q9UPY3 1922 aaKnown RBP17.04■□□□□ 0.32
CTDSP1-206ENST00000464255 CCDC93Q567U6 631 aa17.04■□□□□ 0.32
CTDSP1-206ENST00000464255 UTP14AQ9BVJ6 771 aaKnown RBP17.04■□□□□ 0.32
CTDSP1-206ENST00000464255 FKBP4Q02790 459 aaKnown RBP eCLIP17.03■□□□□ 0.325e-6■□□□□ 10.6
CTDSP1-206ENST00000464255 PPP1R42Q7Z4L9 355 aa17.03■□□□□ 0.32
CTDSP1-206ENST00000464255 C8orf58Q8NAV2 365 aa17.03■□□□□ 0.32
CTDSP1-206ENST00000464255 ZNF277Q9NRM2 450 aaPredicted RBP17.03■□□□□ 0.32
CTDSP1-206ENST00000464255 DBF4Q9UBU7 674 aaPredicted RBP17.03■□□□□ 0.32
CTDSP1-206ENST00000464255 TIAM2Q8IVF5 1701 aa17.03■□□□□ 0.32
CTDSP1-206ENST00000464255 VEGFAP15692 232 aaPredicted RBP17.02■□□□□ 0.32
CTDSP1-206ENST00000464255 GNAI1P63096 354 aa17.02■□□□□ 0.32
CTDSP1-206ENST00000464255 RTKN2Q8IZC4 609 aa17.02■□□□□ 0.32
CTDSP1-206ENST00000464255 PLBD2Q8NHP8 589 aa17.02■□□□□ 0.32
CTDSP1-206ENST00000464255 CRAMP1Q96RY5 1269 aa17.02■□□□□ 0.32
CTDSP1-206ENST00000464255 ELL2O00472 640 aaPredicted RBP17.01■□□□□ 0.31
CTDSP1-206ENST00000464255 HSP90AB3PQ58FF7 597 aa17.01■□□□□ 0.31
CTDSP1-206ENST00000464255 ANKRD13DQ6ZTN6 518 aa17.01■□□□□ 0.31
CTDSP1-206ENST00000464255 ISCA1Q9BUE6 129 aa17.01■□□□□ 0.31
CTDSP1-206ENST00000464255 DDNO94850 711 aaPredicted RBP17■□□□□ 0.31
CTDSP1-206ENST00000464255 HCLS1P14317 486 aaPredicted RBP17■□□□□ 0.31
CTDSP1-206ENST00000464255 CALD1Q05682 793 aaKnown RBP17■□□□□ 0.31
CTDSP1-206ENST00000464255 FSTL1Q12841 308 aa17■□□□□ 0.31
CTDSP1-206ENST00000464255 CCDC27Q2M243 656 aa17■□□□□ 0.31
CTDSP1-206ENST00000464255 DPY19L2Q6NUT2 758 aa17■□□□□ 0.31
CTDSP1-206ENST00000464255 DNAJC5GQ8N7S2 189 aa17■□□□□ 0.31
CTDSP1-206ENST00000464255 TSPYL6Q8N831 410 aa17■□□□□ 0.31
CTDSP1-206ENST00000464255 RPGRQ92834 1020 aaKnown RBP17■□□□□ 0.31
CTDSP1-206ENST00000464255 ZNF428Q96B54 188 aa17■□□□□ 0.31
CTDSP1-206ENST00000464255 HYPKQ9NX55 129 aa17■□□□□ 0.31
CTDSP1-206ENST00000464255 RNF123Q5XPI4 1314 aa16.99■□□□□ 0.31
CTDSP1-206ENST00000464255 WDR90Q96KV7 1748 aa16.99■□□□□ 0.31
CTDSP1-206ENST00000464255 WWC1Q8IX03 1113 aa16.99■□□□□ 0.31
CTDSP1-206ENST00000464255 C16orf71Q8IYS4 520 aaPredicted RBP16.99■□□□□ 0.31
CTDSP1-206ENST00000464255 RBM17Q96I25 401 aaKnown RBP16.99■□□□□ 0.31
CTDSP1-206ENST00000464255 NLRP3Q96P20 1036 aa16.99■□□□□ 0.31
CTDSP1-206ENST00000464255 PSMD1Q99460 953 aa16.99■□□□□ 0.31
CTDSP1-206ENST00000464255 PHAXQ9H814 394 aaKnown RBP16.99■□□□□ 0.31
CTDSP1-206ENST00000464255 APLP1P51693 650 aa16.98■□□□□ 0.31
CTDSP1-206ENST00000464255 TRMT112Q9UI30 125 aaKnown RBP16.98■□□□□ 0.31
CTDSP1-206ENST00000464255 PCNTO95613 3336 aa16.98■□□□□ 0.31
CTDSP1-206ENST00000464255 COL4A5P29400 1685 aa16.97■□□□□ 0.31
CTDSP1-206ENST00000464255 ANKRD36CQ5JPF3 1778 aa16.97■□□□□ 0.31
CTDSP1-206ENST00000464255 ATP5J2-PTCD1G3V325 749 aa16.97■□□□□ 0.31
CTDSP1-206ENST00000464255 IARSP41252 1262 aaKnown RBP16.97■□□□□ 0.31
CTDSP1-206ENST00000464255 TRIM28Q13263 835 aaKnown RBP16.97■□□□□ 0.31
CTDSP1-206ENST00000464255 NCBP3Q53F19 620 aaKnown RBP16.97■□□□□ 0.31
CTDSP1-206ENST00000464255 CC2D2BQ6DHV5 1058 aa16.97■□□□□ 0.31
CTDSP1-206ENST00000464255 TSR2Q969E8 191 aaKnown RBP16.97■□□□□ 0.31
CTDSP1-206ENST00000464255 MRS2Q9HD23 443 aa16.97■□□□□ 0.31
CTDSP1-206ENST00000464255 ABCC4O15439 1325 aa16.96■□□□□ 0.31
CTDSP1-206ENST00000464255 SH3TC1Q8TE82 1336 aa16.96■□□□□ 0.31
CTDSP1-206ENST00000464255 ZNF541Q9H0D2 1346 aa16.96■□□□□ 0.31
CTDSP1-206ENST00000464255 FZD9O00144 591 aa16.96■□□□□ 0.31
CTDSP1-206ENST00000464255 TCERG1O14776 1098 aaKnown RBP16.96■□□□□ 0.31
CTDSP1-206ENST00000464255 PPEF1O14829 653 aaPredicted RBP16.96■□□□□ 0.31
CTDSP1-206ENST00000464255 ANP32CO43423 234 aa16.96■□□□□ 0.31
CTDSP1-206ENST00000464255 HTRA3P83110 453 aa16.96■□□□□ 0.31
CTDSP1-206ENST00000464255 SMC1BQ8NDV3 1235 aa16.96■□□□□ 0.31
CTDSP1-206ENST00000464255 L3MBTL3Q96JM7 780 aaPredicted RBP16.96■□□□□ 0.31
CTDSP1-206ENST00000464255 FAM89AQ96GI7 184 aa16.95■□□□□ 0.3
CTDSP1-206ENST00000464255 ATP6V0A2Q9Y487 856 aa16.95■□□□□ 0.3
CTDSP1-206ENST00000464255 POTEIP0CG38 1075 aa16.94■□□□□ 0.3
CTDSP1-206ENST00000464255 POTEJP0CG39 1038 aa16.94■□□□□ 0.3
CTDSP1-206ENST00000464255 LAMB2P55268 1798 aa16.94■□□□□ 0.3
CTDSP1-206ENST00000464255 BBOX1O75936 387 aa16.93■□□□□ 0.3
CTDSP1-206ENST00000464255 GRIPAP1Q4V328 841 aa16.93■□□□□ 0.3
CTDSP1-206ENST00000464255 IL16Q14005 1332 aa16.93■□□□□ 0.3
CTDSP1-206ENST00000464255 SF3B3Q15393 1217 aaKnown RBP16.92■□□□□ 0.3
CTDSP1-206ENST00000464255 SP8Q8IXZ3 490 aa16.92■□□□□ 0.3
CTDSP1-206ENST00000464255 RTFDC1Q9BY42 306 aaPredicted RBP16.92■□□□□ 0.3
CTDSP1-206ENST00000464255 CCDC30Q5VVM6 783 aa16.91■□□□□ 0.3
CTDSP1-206ENST00000464255 RIC3Q7Z5B4 369 aa16.91■□□□□ 0.3
CTDSP1-206ENST00000464255 TAF1DQ9H5J8 278 aaPredicted RBP16.91■□□□□ 0.3
CTDSP1-206ENST00000464255 COL4A1P02462 1669 aa16.91■□□□□ 0.3
CTDSP1-206ENST00000464255 TAF1P21675 1872 aa16.9■□□□□ 0.3
CTDSP1-206ENST00000464255 DDX60Q8IY21 1712 aaKnown RBP16.9■□□□□ 0.3
CTDSP1-206ENST00000464255 GOLGA2Q08379 1002 aa16.9■□□□□ 0.3
CTDSP1-206ENST00000464255 GRAPQ13588 217 aa16.9■□□□□ 0.3
CTDSP1-206ENST00000464255 RTL5Q5HYW3 569 aaPredicted RBP16.9■□□□□ 0.3
CTDSP1-206ENST00000464255 GRAPLQ8TC17 118 aaPredicted RBP16.9■□□□□ 0.3
CTDSP1-206ENST00000464255 DDX46Q7L014 1031 aaKnown RBP16.89■□□□□ 0.29
CTDSP1-206ENST00000464255 G2E3Q7L622 706 aa16.89■□□□□ 0.29
CTDSP1-206ENST00000464255 GPC2Q8N158 579 aa16.89■□□□□ 0.29
CTDSP1-206ENST00000464255 ZBTB38Q8NAP3 1195 aaPredicted RBP16.89■□□□□ 0.29
CTDSP1-206ENST00000464255 MYD88Q99836 296 aa16.89■□□□□ 0.29
CTDSP1-206ENST00000464255 METTL22Q9BUU2 404 aaPredicted RBP16.89■□□□□ 0.29
CTDSP1-206ENST00000464255 SPINK5Q9NQ38 1064 aaPredicted RBP16.89■□□□□ 0.29
CTDSP1-206ENST00000464255 IRS4O14654 1257 aaPredicted RBP16.88■□□□□ 0.29
CTDSP1-206ENST00000464255 TWISTNBQ3B726 338 aaPredicted RBP16.88■□□□□ 0.29
CTDSP1-206ENST00000464255 CHADLQ6NUI6 762 aa16.88■□□□□ 0.29
CTDSP1-206ENST00000464255 WDR63Q8IWG1 891 aa16.88■□□□□ 0.29
CTDSP1-206ENST00000464255 LARGE2Q8N3Y3 721 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms