RNA–Protein interactions for RNA: ENST00000464225.5

CHKB-203, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-203ENST00000464225 VEGFAP15692 232 aaPredicted RBP13.11□□□□□ -0.31
CHKB-203ENST00000464225 APLP1P51693 650 aa13.11□□□□□ -0.31
CHKB-203ENST00000464225 FKBP4Q02790 459 aaKnown RBP eCLIP13.11□□□□□ -0.31
CHKB-203ENST00000464225 FSTL1Q12841 308 aa13.11□□□□□ -0.31
CHKB-203ENST00000464225 HDGFL1Q5TGJ6 251 aa13.11□□□□□ -0.31
CHKB-203ENST00000464225 C3orf67Q6ZVT6 689 aa13.11□□□□□ -0.31
CHKB-203ENST00000464225 PPP1R42Q7Z4L9 355 aa13.11□□□□□ -0.31
CHKB-203ENST00000464225 POTECB2RU33 542 aa13.1□□□□□ -0.31
CHKB-203ENST00000464225 ZNF853P0CG23 659 aa13.1□□□□□ -0.31
CHKB-203ENST00000464225 HOXA10P31260 410 aaPredicted RBP13.1□□□□□ -0.31
CHKB-203ENST00000464225 DUSP27Q5VZP5 1158 aa13.1□□□□□ -0.31
CHKB-203ENST00000464225 DPY19L2Q6NUT2 758 aa13.1□□□□□ -0.31
CHKB-203ENST00000464225 RTKN2Q8IZC4 609 aa13.1□□□□□ -0.31
CHKB-203ENST00000464225 RPGRQ92834 1020 aaKnown RBP13.1□□□□□ -0.31
CHKB-203ENST00000464225 UTP14AQ9BVJ6 771 aaKnown RBP13.1□□□□□ -0.31
CHKB-203ENST00000464225 ZNF277Q9NRM2 450 aaPredicted RBP13.1□□□□□ -0.31
CHKB-203ENST00000464225 HSP90AB3PQ58FF7 597 aa13.09□□□□□ -0.31
CHKB-203ENST00000464225 SLC51AQ86UW1 340 aa13.09□□□□□ -0.31
CHKB-203ENST00000464225 NLRP10Q86W26 655 aa13.09□□□□□ -0.31
CHKB-203ENST00000464225 SMC1BQ8NDV3 1235 aa13.09□□□□□ -0.31
CHKB-203ENST00000464225 IFT57Q9NWB7 429 aa13.09□□□□□ -0.31
CHKB-203ENST00000464225 DBF4Q9UBU7 674 aaPredicted RBP13.09□□□□□ -0.31
CHKB-203ENST00000464225 DDNO94850 711 aaPredicted RBP13.08□□□□□ -0.32
CHKB-203ENST00000464225 TCIRG1Q13488 830 aa13.08□□□□□ -0.32
CHKB-203ENST00000464225 SLC10A5Q5PT55 438 aa13.08□□□□□ -0.32
CHKB-203ENST00000464225 CRAMP1Q96RY5 1269 aa13.08□□□□□ -0.32
CHKB-203ENST00000464225 RNF123Q5XPI4 1314 aa13.08□□□□□ -0.32
CHKB-203ENST00000464225 IARSP41252 1262 aaKnown RBP13.07□□□□□ -0.32
CHKB-203ENST00000464225 GNAI1P63096 354 aa13.07□□□□□ -0.32
CHKB-203ENST00000464225 CALD1Q05682 793 aaKnown RBP13.07□□□□□ -0.32
CHKB-203ENST00000464225 SYNE4Q8N205 404 aa13.07□□□□□ -0.32
CHKB-203ENST00000464225 PLBD2Q8NHP8 589 aa13.07□□□□□ -0.32
CHKB-203ENST00000464225 RBM17Q96I25 401 aaKnown RBP13.07□□□□□ -0.32
CHKB-203ENST00000464225 NLRP3Q96P20 1036 aa13.07□□□□□ -0.32
CHKB-203ENST00000464225 PSMD1Q99460 953 aa13.07□□□□□ -0.32
CHKB-203ENST00000464225 ZNF541Q9H0D2 1346 aa13.07□□□□□ -0.32
CHKB-203ENST00000464225 PPEF1O14829 653 aaPredicted RBP13.06□□□□□ -0.32
CHKB-203ENST00000464225 HTRA3P83110 453 aa13.06□□□□□ -0.32
CHKB-203ENST00000464225 CC2D2BQ6DHV5 1058 aa13.06□□□□□ -0.32
CHKB-203ENST00000464225 ANKRD13DQ6ZTN6 518 aa13.06□□□□□ -0.32
CHKB-203ENST00000464225 DNAJC5GQ8N7S2 189 aa13.06□□□□□ -0.32
CHKB-203ENST00000464225 ZNF428Q96B54 188 aa13.06□□□□□ -0.32
CHKB-203ENST00000464225 LAMB2P55268 1798 aa13.06□□□□□ -0.32
CHKB-203ENST00000464225 SH3TC1Q8TE82 1336 aa13.06□□□□□ -0.32
CHKB-203ENST00000464225 COL4A5P29400 1685 aa13.05□□□□□ -0.32
CHKB-203ENST00000464225 ZNF316A6NFI3 1004 aaPredicted RBP13.05□□□□□ -0.32
CHKB-203ENST00000464225 ELL2O00472 640 aaPredicted RBP13.05□□□□□ -0.32
CHKB-203ENST00000464225 TCERG1O14776 1098 aaKnown RBP13.05□□□□□ -0.32
CHKB-203ENST00000464225 HCLS1P14317 486 aaPredicted RBP13.05□□□□□ -0.32
CHKB-203ENST00000464225 C8orf58Q8NAV2 365 aa13.05□□□□□ -0.32
CHKB-203ENST00000464225 L3MBTL3Q96JM7 780 aaPredicted RBP13.05□□□□□ -0.32
CHKB-203ENST00000464225 ISCA1Q9BUE6 129 aa13.05□□□□□ -0.32
CHKB-203ENST00000464225 HYPKQ9NX55 129 aa13.05□□□□□ -0.32
CHKB-203ENST00000464225 TRMT112Q9UI30 125 aaKnown RBP13.05□□□□□ -0.32
CHKB-203ENST00000464225 ABCC4O15439 1325 aa13.05□□□□□ -0.32
CHKB-203ENST00000464225 DDX60Q8IY21 1712 aaKnown RBP13.03□□□□□ -0.32
CHKB-203ENST00000464225 ATP5J2-PTCD1G3V325 749 aa13.03□□□□□ -0.32
CHKB-203ENST00000464225 FZD9O00144 591 aa13.03□□□□□ -0.32
CHKB-203ENST00000464225 POTEIP0CG38 1075 aa13.03□□□□□ -0.32
CHKB-203ENST00000464225 POTEJP0CG39 1038 aa13.03□□□□□ -0.32
CHKB-203ENST00000464225 GRIPAP1Q4V328 841 aa13.03□□□□□ -0.32
CHKB-203ENST00000464225 MRS2Q9HD23 443 aa13.03□□□□□ -0.32
CHKB-203ENST00000464225 ATP6V0A2Q9Y487 856 aa13.03□□□□□ -0.32
CHKB-203ENST00000464225 SCN4AP35499 1836 aa13.02□□□□□ -0.32
CHKB-203ENST00000464225 IQCA1LA6NCM1 817 aa13.02□□□□□ -0.33
CHKB-203ENST00000464225 ANP32CO43423 234 aa13.02□□□□□ -0.33
CHKB-203ENST00000464225 CCDC27Q2M243 656 aa13.02□□□□□ -0.33
CHKB-203ENST00000464225 TSPYL6Q8N831 410 aa13.02□□□□□ -0.33
CHKB-203ENST00000464225 JDP2Q8WYK2 163 aa13.02□□□□□ -0.33
CHKB-203ENST00000464225 TSR2Q969E8 191 aaKnown RBP13.02□□□□□ -0.33
CHKB-203ENST00000464225 FAM89AQ96GI7 184 aa13.02□□□□□ -0.33
CHKB-203ENST00000464225 TAF1DQ9H5J8 278 aaPredicted RBP13.02□□□□□ -0.33
CHKB-203ENST00000464225 PHAXQ9H814 394 aaKnown RBP13.02□□□□□ -0.33
CHKB-203ENST00000464225 GOLGA2Q08379 1002 aa13.01□□□□□ -0.33
CHKB-203ENST00000464225 CHADLQ6NUI6 762 aa13.01□□□□□ -0.33
CHKB-203ENST00000464225 WWC1Q8IX03 1113 aa13.01□□□□□ -0.33
CHKB-203ENST00000464225 KLRG1Q96E93 195 aa13.01□□□□□ -0.33
CHKB-203ENST00000464225 TAF1P21675 1872 aa13□□□□□ -0.33
CHKB-203ENST00000464225 BBOX1O75936 387 aa13□□□□□ -0.33
CHKB-203ENST00000464225 TRIM28Q13263 835 aaKnown RBP13□□□□□ -0.33
CHKB-203ENST00000464225 GRAPQ13588 217 aa13□□□□□ -0.33
CHKB-203ENST00000464225 DDX46Q7L014 1031 aaKnown RBP13□□□□□ -0.33
CHKB-203ENST00000464225 RIC3Q7Z5B4 369 aa13□□□□□ -0.33
CHKB-203ENST00000464225 GPC2Q8N158 579 aa13□□□□□ -0.33
CHKB-203ENST00000464225 LARGE2Q8N3Y3 721 aa13□□□□□ -0.33
CHKB-203ENST00000464225 GRAPLQ8TC17 118 aaPredicted RBP13□□□□□ -0.33
CHKB-203ENST00000464225 COL4A1P02462 1669 aa12.99□□□□□ -0.33
CHKB-203ENST00000464225 PPIP5K2O43314 1243 aa12.99□□□□□ -0.33
CHKB-203ENST00000464225 EIF6P56537 245 aaKnown RBP12.99□□□□□ -0.33
CHKB-203ENST00000464225 AOC3Q16853 763 aa12.99□□□□□ -0.33
CHKB-203ENST00000464225 RTL5Q5HYW3 569 aaPredicted RBP12.99□□□□□ -0.33
CHKB-203ENST00000464225 CCDC30Q5VVM6 783 aa12.99□□□□□ -0.33
CHKB-203ENST00000464225 LDHDQ86WU2 507 aa12.99□□□□□ -0.33
CHKB-203ENST00000464225 SP8Q8IXZ3 490 aa12.99□□□□□ -0.33
CHKB-203ENST00000464225 NIM1KQ8IY84 436 aa12.99□□□□□ -0.33
CHKB-203ENST00000464225 RTFDC1Q9BY42 306 aaPredicted RBP12.99□□□□□ -0.33
CHKB-203ENST00000464225 TMX4Q9H1E5 349 aaPredicted RBP12.99□□□□□ -0.33
CHKB-203ENST00000464225 HACL1Q9UJ83 578 aa12.99□□□□□ -0.33
CHKB-203ENST00000464225 LRRC37AA6NMS7 1700 aa12.99□□□□□ -0.33
CHKB-203ENST00000464225 IRS4O14654 1257 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms