RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 JDP2Q8WYK2 163 aa22.91■■□□□ 1.26
HMGN1-210ENST00000464078 PRDM10Q9NQV6 1147 aa22.91■■□□□ 1.26
HMGN1-210ENST00000464078 LTBP1Q14766 1721 aa22.91■■□□□ 1.26
HMGN1-210ENST00000464078 VEGFBP49765 207 aa22.9■■□□□ 1.26
HMGN1-210ENST00000464078 RPGRQ92834 1020 aaKnown RBP22.9■■□□□ 1.26
HMGN1-210ENST00000464078 PLEKHF1Q96S99 279 aa22.9■■□□□ 1.26
HMGN1-210ENST00000464078 RASSF10A6NK89 507 aa22.89■■□□□ 1.25
HMGN1-210ENST00000464078 TTLL7Q6ZT98 887 aa22.89■■□□□ 1.25
HMGN1-210ENST00000464078 CLEC11AQ9Y240 323 aa22.89■■□□□ 1.25
HMGN1-210ENST00000464078 THSD7BQ9C0I4 1608 aa22.89■■□□□ 1.25
HMGN1-210ENST00000464078 NFE2L2Q16236 605 aa22.88■■□□□ 1.25
HMGN1-210ENST00000464078 CNTROBQ8N137 903 aa22.88■■□□□ 1.25
HMGN1-210ENST00000464078 CRAMP1Q96RY5 1269 aa22.88■■□□□ 1.25
HMGN1-210ENST00000464078 CTCFP49711 727 aaPredicted RBP22.87■■□□□ 1.25
HMGN1-210ENST00000464078 MAP1SQ66K74 1059 aaPredicted RBP22.87■■□□□ 1.25
HMGN1-210ENST00000464078 ZNF34Q8IZ26 560 aa22.87■■□□□ 1.25
HMGN1-210ENST00000464078 NGEFQ8N5V2 710 aa22.87■■□□□ 1.25
HMGN1-210ENST00000464078 AIDAQ96BJ3 306 aa22.87■■□□□ 1.25
HMGN1-210ENST00000464078 RRP7AQ9Y3A4 280 aaKnown RBP22.87■■□□□ 1.25
HMGN1-210ENST00000464078 NTSR2O95665 410 aa22.86■■□□□ 1.25
HMGN1-210ENST00000464078 GPTP24298 496 aa22.86■■□□□ 1.25
HMGN1-210ENST00000464078 EIF6P56537 245 aaKnown RBP22.86■■□□□ 1.25
HMGN1-210ENST00000464078 GIGYF2Q6Y7W6 1299 aaKnown RBP22.86■■□□□ 1.25
HMGN1-210ENST00000464078 ZBTB3Q9H5J0 574 aa22.86■■□□□ 1.25
HMGN1-210ENST00000464078 WBP1LQ9NX94 342 aa22.86■■□□□ 1.25
HMGN1-210ENST00000464078 MYL6BP14649 208 aa22.85■■□□□ 1.25
HMGN1-210ENST00000464078 SCNN1DP51172 638 aa22.84■■□□□ 1.25
HMGN1-210ENST00000464078 SUSD4Q5VX71 490 aa22.84■■□□□ 1.25
HMGN1-210ENST00000464078 RBM17Q96I25 401 aaKnown RBP22.84■■□□□ 1.25
HMGN1-210ENST00000464078 THUMPD2Q9BTF0 503 aaKnown RBP22.84■■□□□ 1.25
HMGN1-210ENST00000464078 ANKRD36CQ5JPF3 1778 aa22.84■■□□□ 1.25
HMGN1-210ENST00000464078 PPEF1O14829 653 aaPredicted RBP22.83■■□□□ 1.25
HMGN1-210ENST00000464078 LMOD1P29536 600 aaPredicted RBP22.83■■□□□ 1.25
HMGN1-210ENST00000464078 PARP10Q53GL7 1025 aa22.83■■□□□ 1.25
HMGN1-210ENST00000464078 LRP10Q7Z4F1 713 aa22.83■■□□□ 1.25
HMGN1-210ENST00000464078 LARGE2Q8N3Y3 721 aa22.83■■□□□ 1.25
HMGN1-210ENST00000464078 DEFB115Q30KQ5 88 aa22.82■■□□□ 1.24
HMGN1-210ENST00000464078 PNNQ9H307 717 aaKnown RBP22.82■■□□□ 1.24
HMGN1-210ENST00000464078 DDX21Q9NR30 783 aaKnown RBP eCLIP22.82■■□□□ 1.24
HMGN1-210ENST00000464078 GJA3Q9Y6H8 435 aa22.82■■□□□ 1.24
HMGN1-210ENST00000464078 MAPK8IP3Q9UPT6 1336 aa22.82■■□□□ 1.24
HMGN1-210ENST00000464078 TRPM7Q96QT4 1865 aa22.81■■□□□ 1.24
HMGN1-210ENST00000464078 C3orf67Q6ZVT6 689 aa22.81■■□□□ 1.24
HMGN1-210ENST00000464078 PPP1R42Q7Z4L9 355 aa22.81■■□□□ 1.24
HMGN1-210ENST00000464078 LAMB2P55268 1798 aa22.81■■□□□ 1.24
HMGN1-210ENST00000464078 USP50Q70EL3 339 aaPredicted RBP22.8■■□□□ 1.24
HMGN1-210ENST00000464078 VPS33BQ9H267 617 aa22.8■■□□□ 1.24
HMGN1-210ENST00000464078 WDR33Q9C0J8 1336 aaKnown RBP22.8■■□□□ 1.24
HMGN1-210ENST00000464078 EPS15P42566 896 aa22.79■■□□□ 1.24
HMGN1-210ENST00000464078 PDIA6Q15084 440 aa22.79■■□□□ 1.24
HMGN1-210ENST00000464078 SLC10A5Q5PT55 438 aa22.79■■□□□ 1.24
HMGN1-210ENST00000464078 SLC51AQ86UW1 340 aa22.79■■□□□ 1.24
HMGN1-210ENST00000464078 NIM1KQ8IY84 436 aa22.79■■□□□ 1.24
HMGN1-210ENST00000464078 ATP6V0A2Q9Y487 856 aa22.79■■□□□ 1.24
HMGN1-210ENST00000464078 MAP2K1Q02750 393 aaPredicted RBP22.78■■□□□ 1.24
HMGN1-210ENST00000464078 NLRP3Q96P20 1036 aa22.78■■□□□ 1.24
HMGN1-210ENST00000464078 BABAM1Q9NWV8 329 aa22.78■■□□□ 1.24
HMGN1-210ENST00000464078 TSPYL4Q9UJ04 414 aa22.78■■□□□ 1.24
HMGN1-210ENST00000464078 ABT1Q9ULW3 272 aaKnown RBP22.78■■□□□ 1.24
HMGN1-210ENST00000464078 LBX1P52954 281 aa22.77■■□□□ 1.24
HMGN1-210ENST00000464078 RTFDC1Q9BY42 306 aaPredicted RBP22.77■■□□□ 1.24
HMGN1-210ENST00000464078 PPIP5K2O43314 1243 aa22.76■■□□□ 1.23
HMGN1-210ENST00000464078 HSPA8P11142 646 aaKnown RBP22.76■■□□□ 1.23
HMGN1-210ENST00000464078 UTP14AQ9BVJ6 771 aaKnown RBP22.76■■□□□ 1.23
HMGN1-210ENST00000464078 ABCC4O15439 1325 aa22.76■■□□□ 1.23
HMGN1-210ENST00000464078 TMX4Q9H1E5 349 aaPredicted RBP22.75■■□□□ 1.23
HMGN1-210ENST00000464078 GPRC5DQ9NZD1 345 aa22.75■■□□□ 1.23
HMGN1-210ENST00000464078 CDHR2Q9BYE9 1310 aa22.75■■□□□ 1.23
HMGN1-210ENST00000464078 LRRC37AA6NMS7 1700 aa22.74■■□□□ 1.23
HMGN1-210ENST00000464078 AOC3Q16853 763 aa22.74■■□□□ 1.23
HMGN1-210ENST00000464078 SUPT20HQ8NEM7 779 aa22.74■■□□□ 1.23
HMGN1-210ENST00000464078 ADARB2Q9NS39 739 aaKnown RBP22.74■■□□□ 1.23
HMGN1-210ENST00000464078 ZNRF3Q9ULT6 936 aa22.74■■□□□ 1.23
HMGN1-210ENST00000464078 TCERG1O14776 1098 aaKnown RBP22.73■■□□□ 1.23
HMGN1-210ENST00000464078 ECE1P42892 770 aa22.73■■□□□ 1.23
HMGN1-210ENST00000464078 PROSER3Q2NL68 480 aa22.73■■□□□ 1.23
HMGN1-210ENST00000464078 BBOX1O75936 387 aa22.72■■□□□ 1.23
HMGN1-210ENST00000464078 HSP90AB3PQ58FF7 597 aa22.72■■□□□ 1.23
HMGN1-210ENST00000464078 CAPNS2Q96L46 248 aa22.72■■□□□ 1.23
HMGN1-210ENST00000464078 DUOX1Q9NRD9 1551 aa22.72■■□□□ 1.23
HMGN1-210ENST00000464078 FMR1Q06787 632 aaKnown RBP eCLIP22.71■■□□□ 1.232e-6■□□□□ 10.3
HMGN1-210ENST00000464078 CXCL9Q07325 125 aa22.71■■□□□ 1.23
HMGN1-210ENST00000464078 CST9Q5W186 159 aa22.71■■□□□ 1.23
HMGN1-210ENST00000464078 SP8Q8IXZ3 490 aa22.71■■□□□ 1.23
HMGN1-210ENST00000464078 TLL2Q9Y6L7 1015 aa22.71■■□□□ 1.23
HMGN1-210ENST00000464078 TRAF5O00463 557 aa22.7■■□□□ 1.22
HMGN1-210ENST00000464078 EIF2S2P20042 333 aaKnown RBP22.7■■□□□ 1.22
HMGN1-210ENST00000464078 RIPK4P57078 832 aa22.7■■□□□ 1.22
HMGN1-210ENST00000464078 LMOD3Q0VAK6 560 aa22.7■■□□□ 1.22
HMGN1-210ENST00000464078 KIAA2012Q0VF49 1180 aa22.7■■□□□ 1.22
HMGN1-210ENST00000464078 NLRP10Q86W26 655 aa22.7■■□□□ 1.22
HMGN1-210ENST00000464078 ANXA1P04083 346 aa22.69■■□□□ 1.22
HMGN1-210ENST00000464078 DPP8Q6V1X1 898 aaPredicted RBP22.69■■□□□ 1.22
HMGN1-210ENST00000464078 GMPSP49915 693 aaPredicted RBP22.68■■□□□ 1.22
HMGN1-210ENST00000464078 PGAP2Q9UHJ9 254 aa22.68■■□□□ 1.22
HMGN1-210ENST00000464078 DDX60Q8IY21 1712 aaKnown RBP22.68■■□□□ 1.22
HMGN1-210ENST00000464078 SH3TC1Q8TE82 1336 aa22.67■■□□□ 1.22
HMGN1-210ENST00000464078 TMPOP42166 694 aaKnown RBP22.67■■□□□ 1.22
HMGN1-210ENST00000464078 CYP4F22Q6NT55 531 aa22.67■■□□□ 1.22
HMGN1-210ENST00000464078 COPS6Q7L5N1 327 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms