RNA–Protein interactions for RNA: ENST00000463994.4

CDKL5-203, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 2,632 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-203ENST00000463994 DDX11Q96FC9 970 aa8.31□□□□□ -1.08
CDKL5-203ENST00000463994 TMX4Q9H1E5 349 aaPredicted RBP8.31□□□□□ -1.08
CDKL5-203ENST00000463994 TRAK1Q9UPV9 953 aa8.31□□□□□ -1.08
CDKL5-203ENST00000463994 NPATQ14207 1427 aa8.31□□□□□ -1.08
CDKL5-203ENST00000463994 AP5Z1O43299 807 aa8.31□□□□□ -1.08
CDKL5-203ENST00000463994 MX1P20591 662 aa8.31□□□□□ -1.08
CDKL5-203ENST00000463994 PSMD2Q13200 908 aa8.31□□□□□ -1.08
CDKL5-203ENST00000463994 RETREG2Q8NC44 543 aa8.31□□□□□ -1.08
CDKL5-203ENST00000463994 N4BP2L2Q92802 583 aaPredicted RBP8.31□□□□□ -1.08
CDKL5-203ENST00000463994 THOC1Q96FV9 657 aaKnown RBP8.31□□□□□ -1.08
CDKL5-203ENST00000463994 ABCA6Q8N139 1617 aa8.3□□□□□ -1.08
CDKL5-203ENST00000463994 ATXN8OSP0DMR3 200 aa8.3□□□□□ -1.08
CDKL5-203ENST00000463994 MAGEA8P43361 318 aa8.3□□□□□ -1.08
CDKL5-203ENST00000463994 RPS6KA3P51812 740 aa8.3□□□□□ -1.08
CDKL5-203ENST00000463994 LRMPQ12912 555 aa8.3□□□□□ -1.08
CDKL5-203ENST00000463994 JPH2Q9BR39 696 aaPredicted RBP8.3□□□□□ -1.08
CDKL5-203ENST00000463994 L2HGDHQ9H9P8 463 aa8.3□□□□□ -1.08
CDKL5-203ENST00000463994 CLIP2Q9UDT6 1046 aa8.3□□□□□ -1.08
CDKL5-203ENST00000463994 MCM8Q9UJA3 840 aa8.3□□□□□ -1.08
CDKL5-203ENST00000463994 SOS1Q07889 1333 aaPredicted RBP8.3□□□□□ -1.08
CDKL5-203ENST00000463994 INO80Q9ULG1 1556 aaPredicted RBP8.3□□□□□ -1.08
CDKL5-203ENST00000463994 RDXP35241 583 aaKnown RBP8.3□□□□□ -1.08
CDKL5-203ENST00000463994 BMP2KLQ5H9B9 411 aa8.3□□□□□ -1.08
CDKL5-203ENST00000463994 LRRC31Q6UY01 552 aa8.3□□□□□ -1.08
CDKL5-203ENST00000463994 DRC7Q8IY82 874 aa8.3□□□□□ -1.08
CDKL5-203ENST00000463994 RPUSD2Q8IZ73 545 aaKnown RBP8.3□□□□□ -1.08
CDKL5-203ENST00000463994 PTPRTO14522 1441 aa8.29□□□□□ -1.08
CDKL5-203ENST00000463994 RAPGEF3O95398 923 aa8.29□□□□□ -1.08
CDKL5-203ENST00000463994 GPTP24298 496 aa8.29□□□□□ -1.08
CDKL5-203ENST00000463994 SCRN1Q12765 414 aa8.29□□□□□ -1.08
CDKL5-203ENST00000463994 FOXR1Q6PIV2 292 aa8.29□□□□□ -1.08
CDKL5-203ENST00000463994 ANKRD18AQ8IVF6 992 aa8.29□□□□□ -1.08
CDKL5-203ENST00000463994 KCNB2Q92953 911 aa8.29□□□□□ -1.08
CDKL5-203ENST00000463994 BAG1Q99933 345 aaPredicted RBP8.29□□□□□ -1.08
CDKL5-203ENST00000463994 PLXNC1O60486 1568 aa8.29□□□□□ -1.08
CDKL5-203ENST00000463994 NEMFO60524 1076 aa8.29□□□□□ -1.08
CDKL5-203ENST00000463994 SNUPNO95149 360 aaKnown RBP8.29□□□□□ -1.08
CDKL5-203ENST00000463994 TBC1D8O95759 1140 aa8.29□□□□□ -1.08
CDKL5-203ENST00000463994 POLD1P28340 1107 aa8.29□□□□□ -1.08
CDKL5-203ENST00000463994 CCNHP51946 323 aaPredicted RBP8.29□□□□□ -1.08
CDKL5-203ENST00000463994 DDR1Q08345 913 aa8.29□□□□□ -1.08
CDKL5-203ENST00000463994 SLC5A9Q2M3M2 681 aa8.29□□□□□ -1.08
CDKL5-203ENST00000463994 CPLX2Q6PUV4 134 aaKnown RBP8.29□□□□□ -1.08
CDKL5-203ENST00000463994 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.29□□□□□ -1.08
CDKL5-203ENST00000463994 WDR63Q8IWG1 891 aa8.29□□□□□ -1.08
CDKL5-203ENST00000463994 PRPF38AQ8NAV1 312 aaKnown RBP8.29□□□□□ -1.08
CDKL5-203ENST00000463994 KCNV2Q8TDN2 545 aa8.29□□□□□ -1.08
CDKL5-203ENST00000463994 FBXO41Q8TF61 875 aa8.29□□□□□ -1.08
CDKL5-203ENST00000463994 UBXN4Q92575 508 aa8.29□□□□□ -1.08
CDKL5-203ENST00000463994 ARHGEF1Q92888 912 aaKnown RBP8.29□□□□□ -1.08
CDKL5-203ENST00000463994 FBXW7Q969H0 707 aa8.29□□□□□ -1.08
CDKL5-203ENST00000463994 CHCHD3Q9NX63 227 aaKnown RBP8.29□□□□□ -1.08
CDKL5-203ENST00000463994 ZNF142P52746 1687 aaPredicted RBP8.29□□□□□ -1.08
CDKL5-203ENST00000463994 SAMD9LQ8IVG5 1584 aa8.28□□□□□ -1.08
CDKL5-203ENST00000463994 SIGLEC1Q9BZZ2 1709 aa8.28□□□□□ -1.08
CDKL5-203ENST00000463994 ST18O60284 1047 aa8.28□□□□□ -1.08
CDKL5-203ENST00000463994 TSPY4P0CV99 314 aa8.28□□□□□ -1.08
CDKL5-203ENST00000463994 TSPY10P0CW01 314 aa8.28□□□□□ -1.08
CDKL5-203ENST00000463994 CD151P48509 253 aa8.28□□□□□ -1.08
CDKL5-203ENST00000463994 MRPL12P52815 198 aaKnown RBP8.28□□□□□ -1.08
CDKL5-203ENST00000463994 ZRSR2Q15696 482 aaKnown RBP8.28□□□□□ -1.08
CDKL5-203ENST00000463994 PLEKHO1Q53GL0 409 aaPredicted RBP8.28□□□□□ -1.08
CDKL5-203ENST00000463994 HSP90AB4PQ58FF6 505 aa8.28□□□□□ -1.08
CDKL5-203ENST00000463994 KCNV1Q6PIU1 500 aa8.28□□□□□ -1.08
CDKL5-203ENST00000463994 ZGPATQ8N5A5 531 aaKnown RBP8.28□□□□□ -1.08
CDKL5-203ENST00000463994 DRAXINQ8NBI3 349 aaPredicted RBP8.28□□□□□ -1.08
CDKL5-203ENST00000463994 KAT2BQ92831 832 aa8.28□□□□□ -1.08
CDKL5-203ENST00000463994 CHAMP1Q96JM3 812 aa8.28□□□□□ -1.08
CDKL5-203ENST00000463994 ORC3Q9UBD5 711 aaPredicted RBP8.28□□□□□ -1.08
CDKL5-203ENST00000463994 ERBINQ96RT1 1412 aa8.28□□□□□ -1.08
CDKL5-203ENST00000463994 A0A1B0GUA9 196 aa8.28□□□□□ -1.08
CDKL5-203ENST00000463994 BRD1O95696 1058 aa8.28□□□□□ -1.08
CDKL5-203ENST00000463994 FAM163BP0C2L3 166 aa8.28□□□□□ -1.08
CDKL5-203ENST00000463994 TBC1D25Q3MII6 688 aa8.28□□□□□ -1.08
CDKL5-203ENST00000463994 MSL3Q8N5Y2 521 aaKnown RBP8.28□□□□□ -1.08
CDKL5-203ENST00000463994 ZNF777Q9ULD5 760 aaPredicted RBP8.28□□□□□ -1.08
CDKL5-203ENST00000463994 CCDC141Q6ZP82 1450 aa8.28□□□□□ -1.08
CDKL5-203ENST00000463994 UNC13BO14795 1591 aa8.27□□□□□ -1.09
CDKL5-203ENST00000463994 KIDINS220Q9ULH0 1771 aa8.27□□□□□ -1.09
CDKL5-203ENST00000463994 ANKRD65E5RJM6 399 aa8.27□□□□□ -1.09
CDKL5-203ENST00000463994 RTN2O75298 545 aa8.27□□□□□ -1.09
CDKL5-203ENST00000463994 PPFIA4O75335 1185 aa8.27□□□□□ -1.09
CDKL5-203ENST00000463994 SASH3O75995 380 aa8.27□□□□□ -1.09
CDKL5-203ENST00000463994 PRPHP41219 470 aa8.27□□□□□ -1.09
CDKL5-203ENST00000463994 CCDC125Q86Z20 511 aa8.27□□□□□ -1.09
CDKL5-203ENST00000463994 DMRT2Q9Y5R5 561 aa8.27□□□□□ -1.09
CDKL5-203ENST00000463994 AATKQ6ZMQ8 1374 aa8.27□□□□□ -1.09
CDKL5-203ENST00000463994 UNCXA6NJT0 531 aa8.27□□□□□ -1.09
CDKL5-203ENST00000463994 AP1G2O75843 785 aa8.27□□□□□ -1.09
CDKL5-203ENST00000463994 RLBP1P12271 317 aa8.27□□□□□ -1.09
CDKL5-203ENST00000463994 NFXL1Q6ZNB6 911 aa8.27□□□□□ -1.09
CDKL5-203ENST00000463994 MICAL1Q8TDZ2 1067 aa8.27□□□□□ -1.09
CDKL5-203ENST00000463994 TESK2Q96S53 571 aa8.27□□□□□ -1.09
CDKL5-203ENST00000463994 CRACR2AQ9BSW2 395 aa8.27□□□□□ -1.09
CDKL5-203ENST00000463994 FUCA2Q9BTY2 467 aa8.27□□□□□ -1.09
CDKL5-203ENST00000463994 CHUKO15111 745 aa8.26□□□□□ -1.09
CDKL5-203ENST00000463994 GADD45BO75293 160 aaPredicted RBP8.26□□□□□ -1.09
CDKL5-203ENST00000463994 SEC31AO94979 1220 aaKnown RBP8.26□□□□□ -1.09
CDKL5-203ENST00000463994 TUBB4AP04350 444 aa8.26□□□□□ -1.09
CDKL5-203ENST00000463994 PECAM1P16284 738 aaPredicted RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms