RNA–Protein interactions for RNA: ENST00000463925.1

COL5A1-204, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-204ENST00000463925 DDNO94850 711 aaPredicted RBP22.85■■□□□ 1.25
COL5A1-204ENST00000463925 HOXB7P09629 217 aa22.85■■□□□ 1.25
COL5A1-204ENST00000463925 KRT24Q2M2I5 525 aa22.85■■□□□ 1.25
COL5A1-204ENST00000463925 HSP90AB3PQ58FF7 597 aa22.85■■□□□ 1.25
COL5A1-204ENST00000463925 CC2D2BQ6DHV5 1058 aa22.85■■□□□ 1.25
COL5A1-204ENST00000463925 PSMD1Q99460 953 aa22.85■■□□□ 1.25
COL5A1-204ENST00000463925 ZNF277Q9NRM2 450 aaPredicted RBP22.85■■□□□ 1.25
COL5A1-204ENST00000463925 ZEB1P37275 1124 aaPredicted RBP22.84■■□□□ 1.25
COL5A1-204ENST00000463925 COPS6Q7L5N1 327 aa22.84■■□□□ 1.25
COL5A1-204ENST00000463925 XAGE3Q8WTP9 111 aa22.84■■□□□ 1.25
COL5A1-204ENST00000463925 NECTIN2Q92692 538 aa22.84■■□□□ 1.25
COL5A1-204ENST00000463925 L3MBTL3Q96JM7 780 aaPredicted RBP22.84■■□□□ 1.25
COL5A1-204ENST00000463925 CRAMP1Q96RY5 1269 aa22.84■■□□□ 1.25
COL5A1-204ENST00000463925 LAS1LQ9Y4W2 734 aaKnown RBP22.84■■□□□ 1.25
COL5A1-204ENST00000463925 IARSP41252 1262 aaKnown RBP22.83■■□□□ 1.25
COL5A1-204ENST00000463925 HTRA3P83110 453 aa22.83■■□□□ 1.25
COL5A1-204ENST00000463925 KLRG1Q96E93 195 aa22.83■■□□□ 1.25
COL5A1-204ENST00000463925 RBM17Q96I25 401 aaKnown RBP22.83■■□□□ 1.25
COL5A1-204ENST00000463925 CFAP44Q96MT7 982 aa22.83■■□□□ 1.25
COL5A1-204ENST00000463925 UTP14AQ9BVJ6 771 aaKnown RBP22.83■■□□□ 1.25
COL5A1-204ENST00000463925 GRIPAP1Q4V328 841 aa22.82■■□□□ 1.24
COL5A1-204ENST00000463925 SLC10A5Q5PT55 438 aa22.82■■□□□ 1.24
COL5A1-204ENST00000463925 SYNE4Q8N205 404 aa22.82■■□□□ 1.24
COL5A1-204ENST00000463925 SCN4AP35499 1836 aa22.82■■□□□ 1.24
COL5A1-204ENST00000463925 IQCA1LA6NCM1 817 aa22.81■■□□□ 1.24
COL5A1-204ENST00000463925 AIMP1Q12904 312 aaKnown RBP22.81■■□□□ 1.24
COL5A1-204ENST00000463925 C3orf67Q6ZVT6 689 aa22.81■■□□□ 1.24
COL5A1-204ENST00000463925 NLRP3Q96P20 1036 aa22.81■■□□□ 1.24
COL5A1-204ENST00000463925 CHPF2Q9P2E5 772 aa22.81■■□□□ 1.24
COL5A1-204ENST00000463925 ZNF541Q9H0D2 1346 aa22.81■■□□□ 1.24
COL5A1-204ENST00000463925 HDGFL1Q5TGJ6 251 aa22.8■■□□□ 1.24
COL5A1-204ENST00000463925 NLRP10Q86W26 655 aa22.8■■□□□ 1.24
COL5A1-204ENST00000463925 FZD9O00144 591 aa22.79■■□□□ 1.24
COL5A1-204ENST00000463925 PPEF1O14829 653 aaPredicted RBP22.79■■□□□ 1.24
COL5A1-204ENST00000463925 TCIRG1Q13488 830 aa22.79■■□□□ 1.24
COL5A1-204ENST00000463925 ZNF853P0CG23 659 aa22.78■■□□□ 1.24
COL5A1-204ENST00000463925 JMYQ8N9B5 988 aa22.78■■□□□ 1.24
COL5A1-204ENST00000463925 MBIPQ9NS73 344 aa22.78■■□□□ 1.24
COL5A1-204ENST00000463925 APAF1O14727 1248 aa22.77■■□□□ 1.24
COL5A1-204ENST00000463925 CHADLQ6NUI6 762 aa22.77■■□□□ 1.24
COL5A1-204ENST00000463925 DBF4Q9UBU7 674 aaPredicted RBP22.77■■□□□ 1.24
COL5A1-204ENST00000463925 DUSP27Q5VZP5 1158 aa22.76■■□□□ 1.23
COL5A1-204ENST00000463925 PLBD2Q8NHP8 589 aa22.76■■□□□ 1.23
COL5A1-204ENST00000463925 JDP2Q8WYK2 163 aa22.76■■□□□ 1.23
COL5A1-204ENST00000463925 TAF1DQ9H5J8 278 aaPredicted RBP22.76■■□□□ 1.23
COL5A1-204ENST00000463925 COL4A5P29400 1685 aa22.76■■□□□ 1.23
COL5A1-204ENST00000463925 SH3TC1Q8TE82 1336 aa22.76■■□□□ 1.23
COL5A1-204ENST00000463925 LAMB2P55268 1798 aa22.76■■□□□ 1.23
COL5A1-204ENST00000463925 POTEIP0CG38 1075 aa22.75■■□□□ 1.23
COL5A1-204ENST00000463925 POTEJP0CG39 1038 aa22.75■■□□□ 1.23
COL5A1-204ENST00000463925 CALD1Q05682 793 aaKnown RBP22.75■■□□□ 1.23
COL5A1-204ENST00000463925 LDHDQ86WU2 507 aa22.75■■□□□ 1.23
COL5A1-204ENST00000463925 IFT57Q9NWB7 429 aa22.75■■□□□ 1.23
COL5A1-204ENST00000463925 ABCC4O15439 1325 aa22.75■■□□□ 1.23
COL5A1-204ENST00000463925 GPC2Q8N158 579 aa22.74■■□□□ 1.23
COL5A1-204ENST00000463925 HYPKQ9NX55 129 aa22.74■■□□□ 1.23
COL5A1-204ENST00000463925 TRMT112Q9UI30 125 aaKnown RBP22.74■■□□□ 1.23
COL5A1-204ENST00000463925 ATP6V0A2Q9Y487 856 aa22.74■■□□□ 1.23
COL5A1-204ENST00000463925 GNAI1P63096 354 aa22.73■■□□□ 1.23
COL5A1-204ENST00000463925 ANKRD13DQ6ZTN6 518 aa22.73■■□□□ 1.23
COL5A1-204ENST00000463925 SLC51AQ86UW1 340 aa22.73■■□□□ 1.23
COL5A1-204ENST00000463925 HACL1Q9UJ83 578 aa22.73■■□□□ 1.23
COL5A1-204ENST00000463925 ADAMTSL1Q8N6G6 1762 aa22.72■■□□□ 1.23
COL5A1-204ENST00000463925 HCLS1P14317 486 aaPredicted RBP22.72■■□□□ 1.23
COL5A1-204ENST00000463925 ISCA1Q9BUE6 129 aa22.72■■□□□ 1.23
COL5A1-204ENST00000463925 TMX4Q9H1E5 349 aaPredicted RBP22.72■■□□□ 1.23
COL5A1-204ENST00000463925 TCERG1O14776 1098 aaKnown RBP22.71■■□□□ 1.23
COL5A1-204ENST00000463925 EIF6P56537 245 aaKnown RBP22.71■■□□□ 1.23
COL5A1-204ENST00000463925 LARGE2Q8N3Y3 721 aa22.71■■□□□ 1.23
COL5A1-204ENST00000463925 VPS33BQ9H267 617 aa22.71■■□□□ 1.23
COL5A1-204ENST00000463925 BBOX1O75936 387 aa22.7■■□□□ 1.22
COL5A1-204ENST00000463925 EPHX2P34913 555 aa22.7■■□□□ 1.22
COL5A1-204ENST00000463925 IFFO2Q5TF58 517 aa22.7■■□□□ 1.22
COL5A1-204ENST00000463925 DDX60Q8IY21 1712 aaKnown RBP22.69■■□□□ 1.22
COL5A1-204ENST00000463925 PASKQ96RG2 1323 aa22.69■■□□□ 1.22
COL5A1-204ENST00000463925 DDX46Q7L014 1031 aaKnown RBP22.69■■□□□ 1.22
COL5A1-204ENST00000463925 PNMA8AQ86V59 439 aaPredicted RBP22.69■■□□□ 1.22
COL5A1-204ENST00000463925 RTFDC1Q9BY42 306 aaPredicted RBP22.69■■□□□ 1.22
COL5A1-204ENST00000463925 CREBZFQ9NS37 354 aa22.69■■□□□ 1.22
COL5A1-204ENST00000463925 TRIM28Q13263 835 aaKnown RBP22.68■■□□□ 1.22
COL5A1-204ENST00000463925 GRAPQ13588 217 aa22.68■■□□□ 1.22
COL5A1-204ENST00000463925 SP8Q8IXZ3 490 aa22.68■■□□□ 1.22
COL5A1-204ENST00000463925 SUPT20HQ8NEM7 779 aa22.68■■□□□ 1.22
COL5A1-204ENST00000463925 GRAPLQ8TC17 118 aaPredicted RBP22.68■■□□□ 1.22
COL5A1-204ENST00000463925 PPIP5K2O43314 1243 aa22.67■■□□□ 1.22
COL5A1-204ENST00000463925 EAPPQ56P03 285 aaPredicted RBP22.67■■□□□ 1.22
COL5A1-204ENST00000463925 NIM1KQ8IY84 436 aa22.67■■□□□ 1.22
COL5A1-204ENST00000463925 ATP5J2-PTCD1G3V325 749 aa22.66■■□□□ 1.22
COL5A1-204ENST00000463925 AOC3Q16853 763 aa22.66■■□□□ 1.22
COL5A1-204ENST00000463925 TMC4Q7Z404 712 aa22.66■■□□□ 1.22
COL5A1-204ENST00000463925 LRRC37AA6NMS7 1700 aa22.65■■□□□ 1.22
COL5A1-204ENST00000463925 LTBP1Q14766 1721 aa22.65■■□□□ 1.22
COL5A1-204ENST00000463925 GOLGA2Q08379 1002 aa22.65■■□□□ 1.22
COL5A1-204ENST00000463925 CCDC184Q52MB2 194 aa22.65■■□□□ 1.22
COL5A1-204ENST00000463925 GJA3Q9Y6H8 435 aa22.65■■□□□ 1.22
COL5A1-204ENST00000463925 ITGBL1O95965 494 aaPredicted RBP22.64■■□□□ 1.21
COL5A1-204ENST00000463925 LMOD1P29536 600 aaPredicted RBP22.64■■□□□ 1.21
COL5A1-204ENST00000463925 SF3B3Q15393 1217 aaKnown RBP22.64■■□□□ 1.21
COL5A1-204ENST00000463925 DPP8Q6V1X1 898 aaPredicted RBP22.64■■□□□ 1.21
COL5A1-204ENST00000463925 MPNDQ8N594 471 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms