RNA–Protein interactions for RNA: ENST00000463687.1

VPS8-216, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 568 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-216ENST00000463687 BCL11AQ9H165 835 aa9.34□□□□□ -0.91
VPS8-216ENST00000463687 CABP1Q9NZU7 370 aa9.34□□□□□ -0.91
VPS8-216ENST00000463687 CEP126Q9P2H0 1117 aa9.34□□□□□ -0.91
VPS8-216ENST00000463687 TULP4Q9NRJ4 1543 aa9.34□□□□□ -0.91
VPS8-216ENST00000463687 ATAD2Q6PL18 1390 aa9.34□□□□□ -0.91
VPS8-216ENST00000463687 XIRP1Q702N8 1843 aaKnown RBP9.33□□□□□ -0.92
VPS8-216ENST00000463687 ZEB1P37275 1124 aaPredicted RBP9.33□□□□□ -0.92
VPS8-216ENST00000463687 XPCQ01831 940 aaPredicted RBP9.33□□□□□ -0.92
VPS8-216ENST00000463687 PTK2Q05397 1052 aa9.33□□□□□ -0.92
VPS8-216ENST00000463687 EML3Q32P44 896 aa9.33□□□□□ -0.92
VPS8-216ENST00000463687 TRIM50Q86XT4 487 aa9.33□□□□□ -0.92
VPS8-216ENST00000463687 JCADQ9P266 1359 aa9.33□□□□□ -0.92
VPS8-216ENST00000463687 NALCNQ8IZF0 1738 aa9.33□□□□□ -0.92
VPS8-216ENST00000463687 ATP7BP35670 1465 aa9.33□□□□□ -0.92
VPS8-216ENST00000463687 ACEP12821 1306 aa9.32□□□□□ -0.92
VPS8-216ENST00000463687 NR1I2O75469 434 aa9.32□□□□□ -0.92
VPS8-216ENST00000463687 HSP90B1P14625 803 aaKnown RBP9.32□□□□□ -0.92
VPS8-216ENST00000463687 ATP1A2P50993 1020 aa9.32□□□□□ -0.92
VPS8-216ENST00000463687 MAP7D1Q3KQU3 841 aa9.32□□□□□ -0.92
VPS8-216ENST00000463687 PLPP7Q8NBV4 271 aa9.32□□□□□ -0.92
VPS8-216ENST00000463687 USB1Q9BQ65 265 aaKnown RBP9.32□□□□□ -0.92
VPS8-216ENST00000463687 RBM19Q9Y4C8 960 aaKnown RBP9.32□□□□□ -0.92
VPS8-216ENST00000463687 GPSM3Q9Y4H4 160 aa9.32□□□□□ -0.92
VPS8-216ENST00000463687 PPIP5K1Q6PFW1 1433 aa9.31□□□□□ -0.92
VPS8-216ENST00000463687 TLL1O43897 1013 aa9.31□□□□□ -0.92
VPS8-216ENST00000463687 CTHP32929 405 aa9.31□□□□□ -0.92
VPS8-216ENST00000463687 RNF19BQ6ZMZ0 732 aa9.31□□□□□ -0.92
VPS8-216ENST00000463687 ARMC2Q8NEN0 867 aa9.31□□□□□ -0.92
VPS8-216ENST00000463687 TMC1Q8TDI8 760 aa9.31□□□□□ -0.92
VPS8-216ENST00000463687 IL21Q9HBE4 155 aa9.31□□□□□ -0.92
VPS8-216ENST00000463687 PCDHB9Q9Y5E1 797 aa9.31□□□□□ -0.92
VPS8-216ENST00000463687 POLR3AO14802 1390 aaPredicted RBP9.31□□□□□ -0.92
VPS8-216ENST00000463687 ROBO1Q9Y6N7 1651 aa9.31□□□□□ -0.92
VPS8-216ENST00000463687 ARHGEF28Q8N1W1 1705 aaKnown RBP9.31□□□□□ -0.92
VPS8-216ENST00000463687 AHDC1Q5TGY3 1603 aaPredicted RBP9.31□□□□□ -0.92
VPS8-216ENST00000463687 SPATA31A6Q5VVP1 1343 aa9.31□□□□□ -0.92
VPS8-216ENST00000463687 SPATA31A3Q5VYP0 1347 aa9.31□□□□□ -0.92
VPS8-216ENST00000463687 SBNO1A3KN83 1393 aa9.3□□□□□ -0.92
VPS8-216ENST00000463687 ANKRD33BA6NCL7 494 aa9.3□□□□□ -0.92
VPS8-216ENST00000463687 TCF3P15923 654 aa9.3□□□□□ -0.92
VPS8-216ENST00000463687 DPYDQ12882 1025 aa9.3□□□□□ -0.92
VPS8-216ENST00000463687 OGFOD1Q8N543 542 aa9.3□□□□□ -0.92
VPS8-216ENST00000463687 C1orf216Q8TAB5 229 aa9.3□□□□□ -0.92
VPS8-216ENST00000463687 NKX2-3Q8TAU0 364 aa9.3□□□□□ -0.92
VPS8-216ENST00000463687 DISP3Q9P2K9 1392 aa9.29□□□□□ -0.92
VPS8-216ENST00000463687 NINLQ9Y2I6 1382 aa9.29□□□□□ -0.92
VPS8-216ENST00000463687 ZPR1O75312 459 aa9.29□□□□□ -0.92
VPS8-216ENST00000463687 F12P00748 615 aaPredicted RBP9.29□□□□□ -0.92
VPS8-216ENST00000463687 LAPTM4AQ15012 233 aa9.29□□□□□ -0.92
VPS8-216ENST00000463687 HDGFL2Q7Z4V5 671 aaPredicted RBP9.29□□□□□ -0.92
VPS8-216ENST00000463687 ZNF594Q96JF6 807 aaPredicted RBP9.29□□□□□ -0.92
VPS8-216ENST00000463687 SLC12A5Q9H2X9 1139 aa9.29□□□□□ -0.92
VPS8-216ENST00000463687 DNAAF2Q9NVR5 837 aaKnown RBP9.29□□□□□ -0.92
VPS8-216ENST00000463687 TERF2IPQ9NYB0 399 aa9.29□□□□□ -0.92
VPS8-216ENST00000463687 NOD1Q9Y239 953 aa9.29□□□□□ -0.92
VPS8-216ENST00000463687 BRD4O60885 1362 aaPredicted RBP9.28□□□□□ -0.92
VPS8-216ENST00000463687 PNPLA6Q8IY17 1366 aa9.28□□□□□ -0.92
VPS8-216ENST00000463687 GFRA3O60609 400 aa9.28□□□□□ -0.92
VPS8-216ENST00000463687 ABL1P00519 1130 aa9.28□□□□□ -0.92
VPS8-216ENST00000463687 PTPRNQ16849 979 aa9.28□□□□□ -0.92
VPS8-216ENST00000463687 GPKOWQ92917 476 aaPredicted RBP eCLIP9.28□□□□□ -0.92
VPS8-216ENST00000463687 MAP10Q9P2G4 905 aa9.28□□□□□ -0.92
VPS8-216ENST00000463687 PXDNQ92626 1479 aa9.28□□□□□ -0.92
VPS8-216ENST00000463687 ARHGEF10O15013 1369 aa9.27□□□□□ -0.93
VPS8-216ENST00000463687 PDXDC2PQ6P474 469 aa9.27□□□□□ -0.93
VPS8-216ENST00000463687 BRICD5Q6PL45 260 aa9.27□□□□□ -0.93
VPS8-216ENST00000463687 LARGE2Q8N3Y3 721 aa9.27□□□□□ -0.93
VPS8-216ENST00000463687 THAP11Q96EK4 314 aa9.27□□□□□ -0.93
VPS8-216ENST00000463687 EGFL7Q9UHF1 273 aa9.27□□□□□ -0.93
VPS8-216ENST00000463687 SALL2Q9Y467 1007 aaPredicted RBP9.27□□□□□ -0.93
VPS8-216ENST00000463687 FMN2Q9NZ56 1722 aa9.27□□□□□ -0.93
VPS8-216ENST00000463687 TNS3Q68CZ2 1445 aa9.26□□□□□ -0.93
VPS8-216ENST00000463687 FMNL1O95466 1100 aaPredicted RBP9.26□□□□□ -0.93
VPS8-216ENST00000463687 JUNDP17535 347 aa9.26□□□□□ -0.93
VPS8-216ENST00000463687 KCNH2Q12809 1159 aa9.26□□□□□ -0.93
VPS8-216ENST00000463687 NOM1Q5C9Z4 860 aaKnown RBP9.26□□□□□ -0.93
VPS8-216ENST00000463687 NBPF14Q5TI25 921 aa9.26□□□□□ -0.93
VPS8-216ENST00000463687 TRAF7Q6Q0C0 670 aa9.26□□□□□ -0.93
VPS8-216ENST00000463687 PHTF2Q8N3S3 785 aa9.26□□□□□ -0.93
VPS8-216ENST00000463687 ABTB2Q8N961 1025 aa9.26□□□□□ -0.93
VPS8-216ENST00000463687 POLR3GLQ9BT43 218 aa9.26□□□□□ -0.93
VPS8-216ENST00000463687 USP6P35125 1406 aa9.25□□□□□ -0.93
VPS8-216ENST00000463687 CPSF1Q10570 1443 aaKnown RBP9.25□□□□□ -0.93
VPS8-216ENST00000463687 COL16A1Q07092 1604 aaPredicted RBP9.25□□□□□ -0.93
VPS8-216ENST00000463687 USP32Q8NFA0 1604 aa9.25□□□□□ -0.93
VPS8-216ENST00000463687 MEX3CQ5U5Q3 659 aaKnown RBP9.25□□□□□ -0.93
VPS8-216ENST00000463687 NPAS4Q8IUM7 802 aa9.25□□□□□ -0.93
VPS8-216ENST00000463687 SPSB2Q99619 263 aa9.25□□□□□ -0.93
VPS8-216ENST00000463687 TTC21BQ7Z4L5 1316 aa9.25□□□□□ -0.93
VPS8-216ENST00000463687 KTN1Q86UP2 1357 aaKnown RBP9.24□□□□□ -0.93
VPS8-216ENST00000463687 QRICH2Q9H0J4 1663 aa9.24□□□□□ -0.93
VPS8-216ENST00000463687 C11orf95C9JLR9 678 aaPredicted RBP9.24□□□□□ -0.93
VPS8-216ENST00000463687 LCE2BO14633 110 aa9.24□□□□□ -0.93
VPS8-216ENST00000463687 PRMT3O60678 531 aa9.24□□□□□ -0.93
VPS8-216ENST00000463687 NLRP13Q86W25 1043 aa9.24□□□□□ -0.93
VPS8-216ENST00000463687 GLYCTKQ8IVS8 523 aa9.24□□□□□ -0.93
VPS8-216ENST00000463687 TTC21AQ8NDW8 1320 aa9.24□□□□□ -0.93
VPS8-216ENST00000463687 A0A1W2PP64 1363 aa9.24□□□□□ -0.93
VPS8-216ENST00000463687 ANKRD36BQ8N2N9 1353 aa9.24□□□□□ -0.93
VPS8-216ENST00000463687 SSH2Q76I76 1423 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms