RNA–Protein interactions for RNA: ENST00000463478.1

HERC4-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 3

Gene HERC4, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-208ENST00000463478 C8orf34Q49A92 452 aa7.45□□□□□ -1.22
HERC4-208ENST00000463478 NLRP8Q86W28 1048 aa7.45□□□□□ -1.22
HERC4-208ENST00000463478 GJD3Q8N144 294 aa7.45□□□□□ -1.22
HERC4-208ENST00000463478 DMRTB1Q96MA1 342 aa7.45□□□□□ -1.22
HERC4-208ENST00000463478 FAM129BQ96TA1 746 aa7.45□□□□□ -1.22
HERC4-208ENST00000463478 GPR182O15218 404 aa7.44□□□□□ -1.22
HERC4-208ENST00000463478 INPP5BP32019 993 aa7.44□□□□□ -1.22
HERC4-208ENST00000463478 TYRO3Q06418 890 aa7.44□□□□□ -1.22
HERC4-208ENST00000463478 CMTR1Q8N1G2 835 aaKnown RBP7.44□□□□□ -1.22
HERC4-208ENST00000463478 CCDC155Q8N6L0 562 aa7.44□□□□□ -1.22
HERC4-208ENST00000463478 GIPC2Q8TF65 315 aa7.44□□□□□ -1.22
HERC4-208ENST00000463478 A6NHS1 94 aa7.43□□□□□ -1.22
HERC4-208ENST00000463478 TREHO43280 583 aa7.43□□□□□ -1.22
HERC4-208ENST00000463478 WFS1O76024 890 aa7.43□□□□□ -1.22
HERC4-208ENST00000463478 EPB42P16452 691 aa7.43□□□□□ -1.22
HERC4-208ENST00000463478 NUCKS1Q9H1E3 243 aaKnown RBP7.43□□□□□ -1.22
HERC4-208ENST00000463478 GGNBP2Q9H3C7 697 aa7.43□□□□□ -1.22
HERC4-208ENST00000463478 BRD7Q9NPI1 651 aa7.43□□□□□ -1.22
HERC4-208ENST00000463478 RTCBQ9Y3I0 505 aaKnown RBP7.43□□□□□ -1.22
HERC4-208ENST00000463478 RBM47A0AV96 593 aaKnown RBP7.42□□□□□ -1.22
HERC4-208ENST00000463478 H7C1W4 665 aa7.42□□□□□ -1.22
HERC4-208ENST00000463478 TERTO14746 1132 aaKnown RBP7.42□□□□□ -1.22
HERC4-208ENST00000463478 RPLP1P05386 114 aaKnown RBP7.42□□□□□ -1.22
HERC4-208ENST00000463478 P4HBP07237 508 aaKnown RBP7.42□□□□□ -1.22
HERC4-208ENST00000463478 MAPK8P45983 427 aa7.42□□□□□ -1.22
HERC4-208ENST00000463478 PLCB3Q01970 1234 aa7.42□□□□□ -1.22
HERC4-208ENST00000463478 EHHADHQ08426 723 aa7.42□□□□□ -1.22
HERC4-208ENST00000463478 LBRQ14739 615 aaKnown RBP7.42□□□□□ -1.22
HERC4-208ENST00000463478 EAPPQ56P03 285 aaPredicted RBP7.42□□□□□ -1.22
HERC4-208ENST00000463478 SAMD5Q5TGI4 173 aa7.42□□□□□ -1.22
HERC4-208ENST00000463478 FIGNL1Q6PIW4 674 aa7.42□□□□□ -1.22
HERC4-208ENST00000463478 ZCCHC2Q9C0B9 1178 aaKnown RBP7.42□□□□□ -1.22
HERC4-208ENST00000463478 NIF3L1Q9GZT8 377 aa7.42□□□□□ -1.22
HERC4-208ENST00000463478 DCDC2BA2VCK2 349 aa7.41□□□□□ -1.22
HERC4-208ENST00000463478 UBAP1LF5GYI3 381 aa7.41□□□□□ -1.22
HERC4-208ENST00000463478 KHNYNO15037 678 aaKnown RBP7.41□□□□□ -1.22
HERC4-208ENST00000463478 ATXN7O15265 892 aaPredicted RBP7.41□□□□□ -1.22
HERC4-208ENST00000463478 IGHA2P01877 340 aa7.41□□□□□ -1.22
HERC4-208ENST00000463478 THBS1P07996 1170 aa7.41□□□□□ -1.22
HERC4-208ENST00000463478 RANGAP1P46060 587 aaPredicted RBP7.41□□□□□ -1.22
HERC4-208ENST00000463478 FMR1Q06787 632 aaKnown RBP eCLIP7.41□□□□□ -1.22
HERC4-208ENST00000463478 TRIP4Q15650 581 aaPredicted RBP7.41□□□□□ -1.22
HERC4-208ENST00000463478 CUEDC1Q9NWM3 386 aaPredicted RBP7.41□□□□□ -1.22
HERC4-208ENST00000463478 FNDC3AQ9Y2H6 1198 aaKnown RBP7.41□□□□□ -1.22
HERC4-208ENST00000463478 ZNF16P17020 682 aaPredicted RBP7.4□□□□□ -1.22
HERC4-208ENST00000463478 DSC3Q14574 896 aa7.4□□□□□ -1.22
HERC4-208ENST00000463478 COL19A1Q14993 1142 aa7.4□□□□□ -1.22
HERC4-208ENST00000463478 DBN1Q16643 649 aa7.4□□□□□ -1.22
HERC4-208ENST00000463478 ZNF326Q5BKZ1 582 aaKnown RBP7.4□□□□□ -1.22
HERC4-208ENST00000463478 FBXO33Q7Z6M2 555 aa7.4□□□□□ -1.22
HERC4-208ENST00000463478 ALKBH8Q96BT7 664 aaKnown RBP7.4□□□□□ -1.22
HERC4-208ENST00000463478 NXF1Q9UBU9 619 aaKnown RBP7.4□□□□□ -1.22
HERC4-208ENST00000463478 PCDHGC4Q9Y5F7 938 aa7.4□□□□□ -1.22
HERC4-208ENST00000463478 KCNMB2Q9Y691 235 aa7.4□□□□□ -1.22
HERC4-208ENST00000463478 FAM157BP0CG42 384 aa7.39□□□□□ -1.23
HERC4-208ENST00000463478 ITGA6P23229 1130 aa7.39□□□□□ -1.23
HERC4-208ENST00000463478 GRNP28799 593 aaKnown RBP7.39□□□□□ -1.23
HERC4-208ENST00000463478 TAGLNQ01995 201 aaKnown RBP7.39□□□□□ -1.23
HERC4-208ENST00000463478 LCE2CQ5TA81 110 aa7.39□□□□□ -1.23
HERC4-208ENST00000463478 ZNF438Q7Z4V0 828 aa7.39□□□□□ -1.23
HERC4-208ENST00000463478 TRIM22Q8IYM9 498 aa7.39□□□□□ -1.23
HERC4-208ENST00000463478 PNMA6FA0A0J9YX94 578 aa7.38□□□□□ -1.23
HERC4-208ENST00000463478 XYLBO75191 536 aa7.38□□□□□ -1.23
HERC4-208ENST00000463478 SFSWAPQ12872 951 aaKnown RBP7.38□□□□□ -1.23
HERC4-208ENST00000463478 ORC1Q13415 861 aa7.38□□□□□ -1.23
HERC4-208ENST00000463478 NPAS3Q8IXF0 933 aa7.38□□□□□ -1.23
HERC4-208ENST00000463478 GTPBP3Q969Y2 492 aaKnown RBP7.38□□□□□ -1.23
HERC4-208ENST00000463478 ZNF837Q96EG3 531 aaPredicted RBP7.38□□□□□ -1.23
HERC4-208ENST00000463478 KCNH4Q9UQ05 1017 aa7.38□□□□□ -1.23
HERC4-208ENST00000463478 CDC14CA4D256 554 aa7.37□□□□□ -1.23
HERC4-208ENST00000463478 UNCXA6NJT0 531 aa7.37□□□□□ -1.23
HERC4-208ENST00000463478 WIPF1O43516 503 aa7.37□□□□□ -1.23
HERC4-208ENST00000463478 LDHBP07195 334 aaKnown RBP7.37□□□□□ -1.23
HERC4-208ENST00000463478 MAPTP10636 758 aaKnown RBP7.37□□□□□ -1.23
HERC4-208ENST00000463478 UBAP2LQ14157 1087 aaKnown RBP7.37□□□□□ -1.23
HERC4-208ENST00000463478 ABHD17AQ96GS6 310 aa7.37□□□□□ -1.23
HERC4-208ENST00000463478 E9PSI1 815 aa7.36□□□□□ -1.23
HERC4-208ENST00000463478 EFSO43281 561 aa7.36□□□□□ -1.23
HERC4-208ENST00000463478 BNIP3LO60238 219 aa7.36□□□□□ -1.23
HERC4-208ENST00000463478 NEFLP07196 543 aa7.36□□□□□ -1.23
HERC4-208ENST00000463478 KCNQ4P56696 695 aa7.36□□□□□ -1.23
HERC4-208ENST00000463478 ATP2B2Q01814 1243 aa7.36□□□□□ -1.23
HERC4-208ENST00000463478 TNP2Q05952 138 aa7.36□□□□□ -1.23
HERC4-208ENST00000463478 PDE12Q6L8Q7 609 aaKnown RBP7.36□□□□□ -1.23
HERC4-208ENST00000463478 KRT25Q7Z3Z0 450 aa7.36□□□□□ -1.23
HERC4-208ENST00000463478 GMCL1Q96IK5 515 aa7.36□□□□□ -1.23
HERC4-208ENST00000463478 ELP3Q9H9T3 547 aa7.36□□□□□ -1.23
HERC4-208ENST00000463478 STRN4Q9NRL3 753 aa7.36□□□□□ -1.23
HERC4-208ENST00000463478 TMEM63CQ9P1W3 806 aa7.36□□□□□ -1.23
HERC4-208ENST00000463478 FOXD3Q9UJU5 478 aaPredicted RBP7.36□□□□□ -1.23
HERC4-208ENST00000463478 WWC3Q9ULE0 1092 aa7.36□□□□□ -1.23
HERC4-208ENST00000463478 H3BM21 787 aa7.35□□□□□ -1.23
HERC4-208ENST00000463478 PPFIA3O75145 1194 aa7.35□□□□□ -1.23
HERC4-208ENST00000463478 TNFRSF21O75509 655 aa7.35□□□□□ -1.23
HERC4-208ENST00000463478 CD33P20138 364 aa7.35□□□□□ -1.23
HERC4-208ENST00000463478 ENOX2Q16206 610 aaKnown RBP7.35□□□□□ -1.23
HERC4-208ENST00000463478 XKR5Q6UX68 686 aa7.35□□□□□ -1.23
HERC4-208ENST00000463478 SNX29Q8TEQ0 813 aa7.35□□□□□ -1.23
HERC4-208ENST00000463478 SLC16A10Q8TF71 515 aa7.35□□□□□ -1.23
HERC4-208ENST00000463478 MRRFQ96E11 262 aaKnown RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms