RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 NTSR2O95665 410 aa16.91■□□□□ 0.3
HDAC1-203ENST00000463172 GOLGA2Q08379 1002 aa16.91■□□□□ 0.3
HDAC1-203ENST00000463172 TCIRG1Q13488 830 aa16.91■□□□□ 0.3
HDAC1-203ENST00000463172 CCDC30Q5VVM6 783 aa16.91■□□□□ 0.3
HDAC1-203ENST00000463172 ANKRD13DQ6ZTN6 518 aa16.91■□□□□ 0.3
HDAC1-203ENST00000463172 WWC1Q8IX03 1113 aa16.91■□□□□ 0.3
HDAC1-203ENST00000463172 C16orf71Q8IYS4 520 aaPredicted RBP16.91■□□□□ 0.3
HDAC1-203ENST00000463172 RTKN2Q8IZC4 609 aa16.91■□□□□ 0.3
HDAC1-203ENST00000463172 RBM17Q96I25 401 aaKnown RBP16.91■□□□□ 0.3
HDAC1-203ENST00000463172 DICER1Q9UPY3 1922 aaKnown RBP16.91■□□□□ 0.3
HDAC1-203ENST00000463172 IL16Q14005 1332 aa16.91■□□□□ 0.3
HDAC1-203ENST00000463172 NFKBIEO00221 500 aa16.9■□□□□ 0.3
HDAC1-203ENST00000463172 CRY2Q49AN0 593 aa16.9■□□□□ 0.3
HDAC1-203ENST00000463172 ABCC12Q96J65 1359 aa16.89■□□□□ 0.3
HDAC1-203ENST00000463172 ELL2O00472 640 aaPredicted RBP16.89■□□□□ 0.29
HDAC1-203ENST00000463172 DDX58O95786 925 aaKnown RBP16.89■□□□□ 0.29
HDAC1-203ENST00000463172 GRIPAP1Q4V328 841 aa16.89■□□□□ 0.29
HDAC1-203ENST00000463172 CC2D2BQ6DHV5 1058 aa16.89■□□□□ 0.29
HDAC1-203ENST00000463172 DPY19L2Q6NUT2 758 aa16.89■□□□□ 0.29
HDAC1-203ENST00000463172 STK31Q9BXU1 1019 aa16.89■□□□□ 0.29
HDAC1-203ENST00000463172 TIAM2Q8IVF5 1701 aa16.89■□□□□ 0.29
HDAC1-203ENST00000463172 TNRC6CQ9HCJ0 1690 aaKnown RBP16.88■□□□□ 0.29
HDAC1-203ENST00000463172 SENP3-EIF4A1A0A087X0R7 540 aa16.88■□□□□ 0.29
HDAC1-203ENST00000463172 RIC3Q7Z5B4 369 aa16.88■□□□□ 0.29
HDAC1-203ENST00000463172 NLRP10Q86W26 655 aa16.88■□□□□ 0.29
HDAC1-203ENST00000463172 FAM9BQ8IZU0 186 aa16.88■□□□□ 0.29
HDAC1-203ENST00000463172 TRMT112Q9UI30 125 aaKnown RBP16.88■□□□□ 0.29
HDAC1-203ENST00000463172 SH3TC1Q8TE82 1336 aa16.88■□□□□ 0.29
HDAC1-203ENST00000463172 HSP90B1P14625 803 aaKnown RBP16.87■□□□□ 0.29
HDAC1-203ENST00000463172 HOXA10P31260 410 aaPredicted RBP16.87■□□□□ 0.29
HDAC1-203ENST00000463172 SLC10A5Q5PT55 438 aa16.87■□□□□ 0.29
HDAC1-203ENST00000463172 WDR63Q8IWG1 891 aa16.87■□□□□ 0.29
HDAC1-203ENST00000463172 CRAMP1Q96RY5 1269 aa16.87■□□□□ 0.29
HDAC1-203ENST00000463172 KIF3CO14782 793 aa16.86■□□□□ 0.29
HDAC1-203ENST00000463172 TOMM70O94826 608 aa16.86■□□□□ 0.29
HDAC1-203ENST00000463172 FKBP4Q02790 459 aaKnown RBP eCLIP16.86■□□□□ 0.29
HDAC1-203ENST00000463172 C8orf58Q8NAV2 365 aa16.86■□□□□ 0.29
HDAC1-203ENST00000463172 C7orf43Q8WVR3 580 aa16.86■□□□□ 0.29
HDAC1-203ENST00000463172 GLTPD2A6NH11 291 aa16.85■□□□□ 0.29
HDAC1-203ENST00000463172 TSR2Q969E8 191 aaKnown RBP16.85■□□□□ 0.29
HDAC1-203ENST00000463172 NMRK2Q9NPI5 230 aa16.85■□□□□ 0.29
HDAC1-203ENST00000463172 CACNA1FO60840 1977 aa16.85■□□□□ 0.29
HDAC1-203ENST00000463172 TWISTNBQ3B726 338 aaPredicted RBP16.84■□□□□ 0.29
HDAC1-203ENST00000463172 SALL2Q9Y467 1007 aaPredicted RBP16.84■□□□□ 0.29
HDAC1-203ENST00000463172 PPEF1O14829 653 aaPredicted RBP16.83■□□□□ 0.28
HDAC1-203ENST00000463172 TRIM28Q13263 835 aaKnown RBP16.83■□□□□ 0.28
HDAC1-203ENST00000463172 DDX46Q7L014 1031 aaKnown RBP16.83■□□□□ 0.28
HDAC1-203ENST00000463172 ISCA1Q9BUE6 129 aa16.83■□□□□ 0.28
HDAC1-203ENST00000463172 MYH16Q9H6N6 1097 aa16.83■□□□□ 0.28
HDAC1-203ENST00000463172 RRAGCQ9HB90 399 aa16.83■□□□□ 0.28
HDAC1-203ENST00000463172 VEGFAP15692 232 aaPredicted RBP16.82■□□□□ 0.28
HDAC1-203ENST00000463172 RBM46Q8TBY0 533 aaKnown RBP16.82■□□□□ 0.28
HDAC1-203ENST00000463172 PSMD1Q99460 953 aa16.82■□□□□ 0.28
HDAC1-203ENST00000463172 PHAXQ9H814 394 aaKnown RBP16.82■□□□□ 0.28
HDAC1-203ENST00000463172 ATP5J2-PTCD1G3V325 749 aa16.81■□□□□ 0.28
HDAC1-203ENST00000463172 BBOX1O75936 387 aa16.81■□□□□ 0.28
HDAC1-203ENST00000463172 HCLS1P14317 486 aaPredicted RBP16.81■□□□□ 0.28
HDAC1-203ENST00000463172 PRELPP51888 382 aa16.81■□□□□ 0.28
HDAC1-203ENST00000463172 NEXNQ0ZGT2 675 aa16.81■□□□□ 0.28
HDAC1-203ENST00000463172 TMC4Q7Z404 712 aa16.81■□□□□ 0.28
HDAC1-203ENST00000463172 JDP2Q8WYK2 163 aa16.81■□□□□ 0.28
HDAC1-203ENST00000463172 LAMB2P55268 1798 aa16.81■□□□□ 0.28
HDAC1-203ENST00000463172 FANCIQ9NVI1 1328 aa16.8■□□□□ 0.28
HDAC1-203ENST00000463172 SYNE4Q8N205 404 aa16.8■□□□□ 0.28
HDAC1-203ENST00000463172 TSPYL6Q8N831 410 aa16.8■□□□□ 0.28
HDAC1-203ENST00000463172 CCDC191Q8NCU4 936 aa16.8■□□□□ 0.28
HDAC1-203ENST00000463172 MYD88Q99836 296 aa16.8■□□□□ 0.28
HDAC1-203ENST00000463172 ZNF277Q9NRM2 450 aaPredicted RBP16.8■□□□□ 0.28
HDAC1-203ENST00000463172 ABCC4O15439 1325 aa16.79■□□□□ 0.28
HDAC1-203ENST00000463172 HSPA6P17066 643 aa16.79■□□□□ 0.28
HDAC1-203ENST00000463172 IARSP41252 1262 aaKnown RBP16.79■□□□□ 0.28
HDAC1-203ENST00000463172 FSTL1Q12841 308 aa16.79■□□□□ 0.28
HDAC1-203ENST00000463172 SUPT20HQ8NEM7 779 aa16.79■□□□□ 0.28
HDAC1-203ENST00000463172 FAM89AQ96GI7 184 aa16.79■□□□□ 0.28
HDAC1-203ENST00000463172 TCERG1O14776 1098 aaKnown RBP16.78■□□□□ 0.28
HDAC1-203ENST00000463172 SLC4A2P04920 1241 aa16.78■□□□□ 0.28
HDAC1-203ENST00000463172 GRAPQ13588 217 aa16.78■□□□□ 0.28
HDAC1-203ENST00000463172 KSR2Q6VAB6 950 aa16.78■□□□□ 0.28
HDAC1-203ENST00000463172 C3orf67Q6ZVT6 689 aa16.78■□□□□ 0.28
HDAC1-203ENST00000463172 ZBTB38Q8NAP3 1195 aaPredicted RBP16.78■□□□□ 0.28
HDAC1-203ENST00000463172 GRAPLQ8TC17 118 aaPredicted RBP16.78■□□□□ 0.28
HDAC1-203ENST00000463172 METTL22Q9BUU2 404 aaPredicted RBP16.78■□□□□ 0.28
HDAC1-203ENST00000463172 CWC25Q9NXE8 425 aaPredicted RBP16.78■□□□□ 0.28
HDAC1-203ENST00000463172 ATP6V0A2Q9Y487 856 aa16.78■□□□□ 0.28
HDAC1-203ENST00000463172 WDR90Q96KV7 1748 aa16.78■□□□□ 0.28
HDAC1-203ENST00000463172 DDX60Q8IY21 1712 aaKnown RBP16.77■□□□□ 0.28
HDAC1-203ENST00000463172 IQCA1LA6NCM1 817 aa16.77■□□□□ 0.28
HDAC1-203ENST00000463172 IRS4O14654 1257 aaPredicted RBP16.77■□□□□ 0.28
HDAC1-203ENST00000463172 OLFM4Q6UX06 510 aa16.77■□□□□ 0.28
HDAC1-203ENST00000463172 SMC1BQ8NDV3 1235 aa16.77■□□□□ 0.28
HDAC1-203ENST00000463172 VPS33BQ9H267 617 aa16.77■□□□□ 0.28
HDAC1-203ENST00000463172 MAP3K2Q9Y2U5 619 aa16.77■□□□□ 0.28
HDAC1-203ENST00000463172 SF3B3Q15393 1217 aaKnown RBP16.76■□□□□ 0.27
HDAC1-203ENST00000463172 SP8Q8IXZ3 490 aa16.76■□□□□ 0.27
HDAC1-203ENST00000463172 LARGE2Q8N3Y3 721 aa16.76■□□□□ 0.27
HDAC1-203ENST00000463172 PI4KAP2A4QPH2 592 aa16.75■□□□□ 0.27
HDAC1-203ENST00000463172 PCCAP05165 728 aaPredicted RBP16.75■□□□□ 0.27
HDAC1-203ENST00000463172 APLP1P51693 650 aa16.75■□□□□ 0.27
HDAC1-203ENST00000463172 EIF6P56537 245 aaKnown RBP16.75■□□□□ 0.27
HDAC1-203ENST00000463172 EXOSC9Q06265 439 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms