RNA–Protein interactions for RNA: ENST00000463066.1

HLA-DPA1-245, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 580 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-245ENST00000463066 JARID2Q92833 1246 aaPredicted RBP21.32■■□□□ 1
HLA-DPA1-245ENST00000463066 NYXQ9GZU5 481 aa21.32■■□□□ 1
HLA-DPA1-245ENST00000463066 IBTKQ9P2D0 1353 aaPredicted RBP21.32■■□□□ 1
HLA-DPA1-245ENST00000463066 IGKV5-2P06315 115 aa21.31■■□□□ 1
HLA-DPA1-245ENST00000463066 RTL5Q5HYW3 569 aaPredicted RBP21.31■■□□□ 1
HLA-DPA1-245ENST00000463066 PPP1R42Q7Z4L9 355 aa21.31■■□□□ 1
HLA-DPA1-245ENST00000463066 TRMT112Q9UI30 125 aaKnown RBP21.31■■□□□ 1
HLA-DPA1-245ENST00000463066 BCS1LQ9Y276 419 aa21.31■■□□□ 1
HLA-DPA1-245ENST00000463066 TNRC6CQ9HCJ0 1690 aaKnown RBP21.31■■□□□ 1
HLA-DPA1-245ENST00000463066 ANKRD36CQ5JPF3 1778 aa21.31■■□□□ 1
HLA-DPA1-245ENST00000463066 H0YIN7 160 aa21.3■■□□□ 1
HLA-DPA1-245ENST00000463066 PDE6BP35913 854 aa21.3■■□□□ 1
HLA-DPA1-245ENST00000463066 COL11A2P13942 1736 aaPredicted RBP21.29■■□□□ 1
HLA-DPA1-245ENST00000463066 HCLS1P14317 486 aaPredicted RBP21.29■■□□□ 1
HLA-DPA1-245ENST00000463066 CWF19L2Q2TBE0 894 aaKnown RBP21.29■■□□□ 1
HLA-DPA1-245ENST00000463066 ZNF622Q969S3 477 aaKnown RBP eCLIP21.29■■□□□ 1
HLA-DPA1-245ENST00000463066 FAM89AQ96GI7 184 aa21.29■■□□□ 1
HLA-DPA1-245ENST00000463066 PIM2Q9P1W9 311 aa21.29■■□□□ 1
HLA-DPA1-245ENST00000463066 SRGNP10124 158 aa21.28■■□□□ 1
HLA-DPA1-245ENST00000463066 TRIM28Q13263 835 aaKnown RBP21.28■■□□□ 1
HLA-DPA1-245ENST00000463066 DNAAF4Q8WXU2 420 aa21.28■■□□□ 1
HLA-DPA1-245ENST00000463066 SMC4Q9NTJ3 1288 aa21.28■■□□□ 1
HLA-DPA1-245ENST00000463066 KLRG2A4D1S0 409 aaPredicted RBP21.27■■□□□ 1
HLA-DPA1-245ENST00000463066 SH3TC1Q8TE82 1336 aa21.27■□□□□ 0.99
HLA-DPA1-245ENST00000463066 DCAF8L1A6NGE4 600 aa21.26■□□□□ 0.99
HLA-DPA1-245ENST00000463066 RARSP54136 660 aaKnown RBP21.26■□□□□ 0.99
HLA-DPA1-245ENST00000463066 DALRD3Q5D0E6 543 aaKnown RBP21.26■□□□□ 0.99
HLA-DPA1-245ENST00000463066 SLC10A5Q5PT55 438 aa21.26■□□□□ 0.99
HLA-DPA1-245ENST00000463066 NEURL1BA8MQ27 555 aa21.25■□□□□ 0.99
HLA-DPA1-245ENST00000463066 ALDH1L2Q3SY69 923 aa21.25■□□□□ 0.99
HLA-DPA1-245ENST00000463066 CCDC191Q8NCU4 936 aa21.25■□□□□ 0.99
HLA-DPA1-245ENST00000463066 YTHDC1Q96MU7 727 aaKnown RBP21.25■□□□□ 0.99
HLA-DPA1-245ENST00000463066 CWC25Q9NXE8 425 aaPredicted RBP21.25■□□□□ 0.99
HLA-DPA1-245ENST00000463066 ZNF219Q9P2Y4 722 aaPredicted RBP21.25■□□□□ 0.99
HLA-DPA1-245ENST00000463066 CT47B1P0C2W7 299 aaPredicted RBP21.24■□□□□ 0.99
HLA-DPA1-245ENST00000463066 NEXNQ0ZGT2 675 aa21.24■□□□□ 0.99
HLA-DPA1-245ENST00000463066 SLC51AQ86UW1 340 aa21.24■□□□□ 0.99
HLA-DPA1-245ENST00000463066 MASTLQ96GX5 879 aa21.24■□□□□ 0.99
HLA-DPA1-245ENST00000463066 RIC1Q4ADV7 1423 aa21.23■□□□□ 0.99
HLA-DPA1-245ENST00000463066 CRY2Q49AN0 593 aa21.23■□□□□ 0.99
HLA-DPA1-245ENST00000463066 STYK1Q6J9G0 422 aa21.23■□□□□ 0.99
HLA-DPA1-245ENST00000463066 TTLL6Q8N841 843 aa21.23■□□□□ 0.99
HLA-DPA1-245ENST00000463066 BRCA1P38398 1863 aaKnown RBP21.23■□□□□ 0.99
HLA-DPA1-245ENST00000463066 RNF123Q5XPI4 1314 aa21.23■□□□□ 0.99
HLA-DPA1-245ENST00000463066 NPR1P16066 1061 aa21.22■□□□□ 0.99
HLA-DPA1-245ENST00000463066 BEND3Q5T5X7 828 aa21.22■□□□□ 0.99
HLA-DPA1-245ENST00000463066 SLC4A10Q6U841 1118 aa21.22■□□□□ 0.99
HLA-DPA1-245ENST00000463066 ZBTB38Q8NAP3 1195 aaPredicted RBP21.22■□□□□ 0.99
HLA-DPA1-245ENST00000463066 PDZRN3Q9UPQ7 1066 aa21.22■□□□□ 0.99
HLA-DPA1-245ENST00000463066 DLEC1Q9Y238 1755 aa21.21■□□□□ 0.99
HLA-DPA1-245ENST00000463066 IRS4O14654 1257 aaPredicted RBP21.21■□□□□ 0.99
HLA-DPA1-245ENST00000463066 BCAR3O75815 825 aa21.21■□□□□ 0.99
HLA-DPA1-245ENST00000463066 PCCAP05165 728 aaPredicted RBP21.21■□□□□ 0.99
HLA-DPA1-245ENST00000463066 LINS1Q8NG48 757 aa21.21■□□□□ 0.99
HLA-DPA1-245ENST00000463066 NLRP3Q96P20 1036 aa21.21■□□□□ 0.99
HLA-DPA1-245ENST00000463066 NOB1Q9ULX3 412 aaKnown RBP21.21■□□□□ 0.99
HLA-DPA1-245ENST00000463066 GRIN3BO60391 1043 aa21.2■□□□□ 0.98
HLA-DPA1-245ENST00000463066 GCKRQ14397 625 aa21.2■□□□□ 0.98
HLA-DPA1-245ENST00000463066 PRPF40BQ6NWY9 871 aaKnown RBP21.2■□□□□ 0.98
HLA-DPA1-245ENST00000463066 OLFM4Q6UX06 510 aa21.2■□□□□ 0.98
HLA-DPA1-245ENST00000463066 C21orf2O43822 256 aa21.19■□□□□ 0.98
HLA-DPA1-245ENST00000463066 ARHGAP27Q6ZUM4 889 aa21.19■□□□□ 0.98
HLA-DPA1-245ENST00000463066 RPGRQ92834 1020 aaKnown RBP21.19■□□□□ 0.98
HLA-DPA1-245ENST00000463066 CNKSR1Q969H4 720 aa21.19■□□□□ 0.98
HLA-DPA1-245ENST00000463066 TNNQ9UQP3 1299 aa21.19■□□□□ 0.98
HLA-DPA1-245ENST00000463066 CACNA1FO60840 1977 aa21.19■□□□□ 0.98
HLA-DPA1-245ENST00000463066 H7C1W4 665 aa21.18■□□□□ 0.98
HLA-DPA1-245ENST00000463066 HOXA10P31260 410 aaPredicted RBP21.18■□□□□ 0.98
HLA-DPA1-245ENST00000463066 UBE3BQ7Z3V4 1068 aa21.18■□□□□ 0.98
HLA-DPA1-245ENST00000463066 PTPRCP08575 1304 aa21.18■□□□□ 0.98
HLA-DPA1-245ENST00000463066 CASP7P55210 303 aa21.17■□□□□ 0.98
HLA-DPA1-245ENST00000463066 CCDC85AQ96PX6 553 aaPredicted RBP21.17■□□□□ 0.98
HLA-DPA1-245ENST00000463066 SLX4Q8IY92 1834 aa21.16■□□□□ 0.98
HLA-DPA1-245ENST00000463066 DDX60Q8IY21 1712 aaKnown RBP21.16■□□□□ 0.98
HLA-DPA1-245ENST00000463066 BRPF1P55201 1214 aaPredicted RBP21.16■□□□□ 0.98
HLA-DPA1-245ENST00000463066 ABCC4O15439 1325 aa21.15■□□□□ 0.98
HLA-DPA1-245ENST00000463066 CDHR2Q9BYE9 1310 aa21.15■□□□□ 0.98
HLA-DPA1-245ENST00000463066 RASSF7Q02833 373 aa21.15■□□□□ 0.98
HLA-DPA1-245ENST00000463066 C7orf43Q8WVR3 580 aa21.15■□□□□ 0.98
HLA-DPA1-245ENST00000463066 RBM17Q96I25 401 aaKnown RBP21.15■□□□□ 0.98
HLA-DPA1-245ENST00000463066 SRCIN1Q9C0H9 1055 aa21.15■□□□□ 0.98
HLA-DPA1-245ENST00000463066 COL4A1P02462 1669 aa21.15■□□□□ 0.98
HLA-DPA1-245ENST00000463066 SF3B3Q15393 1217 aaKnown RBP21.14■□□□□ 0.97
HLA-DPA1-245ENST00000463066 CRAMP1Q96RY5 1269 aa21.14■□□□□ 0.97
HLA-DPA1-245ENST00000463066 LAMB2P55268 1798 aa21.14■□□□□ 0.97
HLA-DPA1-245ENST00000463066 NFKBIEO00221 500 aa21.13■□□□□ 0.97
HLA-DPA1-245ENST00000463066 PDE8AO60658 829 aa21.13■□□□□ 0.97
HLA-DPA1-245ENST00000463066 ALDH1L1O75891 902 aa21.13■□□□□ 0.97
HLA-DPA1-245ENST00000463066 FRAT1Q92837 279 aaPredicted RBP21.13■□□□□ 0.97
HLA-DPA1-245ENST00000463066 ALDH1B1P30837 517 aa21.12■□□□□ 0.97
HLA-DPA1-245ENST00000463066 PRELPP51888 382 aa21.12■□□□□ 0.97
HLA-DPA1-245ENST00000463066 SEC31BQ9NQW1 1179 aa21.12■□□□□ 0.97
HLA-DPA1-245ENST00000463066 ARFGEF1Q9Y6D6 1849 aa21.12■□□□□ 0.97
HLA-DPA1-245ENST00000463066 DDX46Q7L014 1031 aaKnown RBP21.11■□□□□ 0.97
HLA-DPA1-245ENST00000463066 CELF1Q92879 486 aaKnown RBP21.11■□□□□ 0.97
HLA-DPA1-245ENST00000463066 API5Q9BZZ5 524 aaKnown RBP21.11■□□□□ 0.97
HLA-DPA1-245ENST00000463066 CACNA1SQ13698 1873 aa21.11■□□□□ 0.97
HLA-DPA1-245ENST00000463066 KIF16BQ96L93 1317 aa21.1■□□□□ 0.97
HLA-DPA1-245ENST00000463066 GRM8O00222 908 aa21.1■□□□□ 0.97
HLA-DPA1-245ENST00000463066 PPEF1O14829 653 aaPredicted RBP21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms