RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 LRRC9Q6ZRR7 1453 aa11.06□□□□□ -0.64
UBE4B-204ENST00000462658 THBS1P07996 1170 aa11.05□□□□□ -0.64
UBE4B-204ENST00000462658 DBN1Q16643 649 aa11.05□□□□□ -0.64
UBE4B-204ENST00000462658 C1orf53Q5VUE5 145 aa11.05□□□□□ -0.64
UBE4B-204ENST00000462658 HECW1Q76N89 1606 aa11.05□□□□□ -0.64
UBE4B-204ENST00000462658 PLB1Q6P1J6 1458 aa11.05□□□□□ -0.64
UBE4B-204ENST00000462658 UACAQ9BZF9 1416 aa11.04□□□□□ -0.64
UBE4B-204ENST00000462658 A0A1W2PNR3 127 aa11.04□□□□□ -0.64
UBE4B-204ENST00000462658 B4GALNT3Q6L9W6 998 aa11.04□□□□□ -0.64
UBE4B-204ENST00000462658 PGBD3Q8N328 593 aa11.04□□□□□ -0.64
UBE4B-204ENST00000462658 LRFN2Q9ULH4 789 aa11.04□□□□□ -0.64
UBE4B-204ENST00000462658 ZCCHC11Q5TAX3 1644 aaKnown RBP11.04□□□□□ -0.64
UBE4B-204ENST00000462658 ABCC10Q5T3U5 1492 aa11.04□□□□□ -0.64
UBE4B-204ENST00000462658 CCDC18Q5T9S5 1454 aa11.04□□□□□ -0.64
UBE4B-204ENST00000462658 RAPGEF6Q8TEU7 1601 aa11.03□□□□□ -0.64
UBE4B-204ENST00000462658 CDC14CA4D256 554 aa11.03□□□□□ -0.64
UBE4B-204ENST00000462658 PTCD1O75127 700 aaKnown RBP11.03□□□□□ -0.64
UBE4B-204ENST00000462658 COX20Q5RI15 118 aa11.03□□□□□ -0.64
UBE4B-204ENST00000462658 HSH2DQ96JZ2 352 aa11.03□□□□□ -0.64
UBE4B-204ENST00000462658 KLK14Q9P0G3 267 aa11.03□□□□□ -0.64
UBE4B-204ENST00000462658 PPRC1Q5VV67 1664 aaKnown RBP11.03□□□□□ -0.64
UBE4B-204ENST00000462658 CFAP43Q8NDM7 1665 aa11.03□□□□□ -0.64
UBE4B-204ENST00000462658 EPRSP07814 1512 aaKnown RBP11.03□□□□□ -0.64
UBE4B-204ENST00000462658 KDM5BQ9UGL1 1544 aa11.03□□□□□ -0.64
UBE4B-204ENST00000462658 MTUS2Q5JR59 1369 aa11.03□□□□□ -0.64
UBE4B-204ENST00000462658 BRD1O95696 1058 aa11.02□□□□□ -0.65
UBE4B-204ENST00000462658 RTN1Q16799 776 aa11.02□□□□□ -0.65
UBE4B-204ENST00000462658 VWA5B2Q8N398 1253 aa11.02□□□□□ -0.65
UBE4B-204ENST00000462658 COL26A1Q96A83 441 aa11.02□□□□□ -0.65
UBE4B-204ENST00000462658 CRISPLD1Q9H336 500 aa11.02□□□□□ -0.65
UBE4B-204ENST00000462658 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.02□□□□□ -0.65
UBE4B-204ENST00000462658 NUP153P49790 1475 aaKnown RBP11.01□□□□□ -0.65
UBE4B-204ENST00000462658 DGKZQ13574 1117 aa11.01□□□□□ -0.65
UBE4B-204ENST00000462658 C16orf46Q6P387 395 aa11.01□□□□□ -0.65
UBE4B-204ENST00000462658 LRRC69Q6ZNQ3 347 aa11.01□□□□□ -0.65
UBE4B-204ENST00000462658 TRIM22Q8IYM9 498 aa11.01□□□□□ -0.65
UBE4B-204ENST00000462658 ZNF280CQ8ND82 737 aa11.01□□□□□ -0.65
UBE4B-204ENST00000462658 ZNF837Q96EG3 531 aaPredicted RBP11.01□□□□□ -0.65
UBE4B-204ENST00000462658 NUCKS1Q9H1E3 243 aaKnown RBP11.01□□□□□ -0.65
UBE4B-204ENST00000462658 TERTO14746 1132 aaKnown RBP11□□□□□ -0.65
UBE4B-204ENST00000462658 MYO19Q96H55 970 aa11□□□□□ -0.65
UBE4B-204ENST00000462658 CDK11AQ9UQ88 783 aaPredicted RBP11□□□□□ -0.65
UBE4B-204ENST00000462658 LRRIQ1Q96JM4 1722 aa11□□□□□ -0.65
UBE4B-204ENST00000462658 ASXL2Q76L83 1435 aa11□□□□□ -0.65
UBE4B-204ENST00000462658 CDK13Q14004 1512 aaKnown RBP10.99□□□□□ -0.65
UBE4B-204ENST00000462658 H3BM21 787 aa10.99□□□□□ -0.65
UBE4B-204ENST00000462658 H7C1W4 665 aa10.99□□□□□ -0.65
UBE4B-204ENST00000462658 ARID4AP29374 1257 aaPredicted RBP10.99□□□□□ -0.65
UBE4B-204ENST00000462658 SERPINB4P48594 390 aa10.99□□□□□ -0.65
UBE4B-204ENST00000462658 EFHC2Q5JST6 749 aa10.99□□□□□ -0.65
UBE4B-204ENST00000462658 AEBP1Q8IUX7 1158 aa10.99□□□□□ -0.65
UBE4B-204ENST00000462658 GTF3C2Q8WUA4 911 aaPredicted RBP10.99□□□□□ -0.65
UBE4B-204ENST00000462658 GTPBP3Q969Y2 492 aaKnown RBP10.99□□□□□ -0.65
UBE4B-204ENST00000462658 SUSD3Q96L08 255 aa10.99□□□□□ -0.65
UBE4B-204ENST00000462658 BCS1LQ9Y276 419 aa10.99□□□□□ -0.65
UBE4B-204ENST00000462658 GJA3Q9Y6H8 435 aa10.99□□□□□ -0.65
UBE4B-204ENST00000462658 TSPOAP1O95153 1857 aa10.98□□□□□ -0.65
UBE4B-204ENST00000462658 ABL1P00519 1130 aa10.98□□□□□ -0.65
UBE4B-204ENST00000462658 MTMR3Q13615 1198 aa10.98□□□□□ -0.65
UBE4B-204ENST00000462658 TXNDC2Q86VQ3 553 aa10.98□□□□□ -0.65
UBE4B-204ENST00000462658 NEUROD4Q9HD90 331 aa10.98□□□□□ -0.65
UBE4B-204ENST00000462658 ANO2Q9NQ90 1003 aa10.98□□□□□ -0.65
UBE4B-204ENST00000462658 DNMT3AQ9Y6K1 912 aaPredicted RBP10.98□□□□□ -0.65
UBE4B-204ENST00000462658 GPR25O00155 361 aa10.97□□□□□ -0.65
UBE4B-204ENST00000462658 UBAP2LQ14157 1087 aaKnown RBP10.97□□□□□ -0.65
UBE4B-204ENST00000462658 C11orf91Q3C1V1 193 aa10.97□□□□□ -0.65
UBE4B-204ENST00000462658 FAM26DQ5JW98 314 aa10.97□□□□□ -0.65
UBE4B-204ENST00000462658 ZNF775Q96BV0 537 aaPredicted RBP10.97□□□□□ -0.65
UBE4B-204ENST00000462658 ZCCHC2Q9C0B9 1178 aaKnown RBP10.97□□□□□ -0.65
UBE4B-204ENST00000462658 GLI2P10070 1586 aa10.96□□□□□ -0.65
UBE4B-204ENST00000462658 EHBP1L1Q8N3D4 1523 aa10.96□□□□□ -0.65
UBE4B-204ENST00000462658 ATP10BO94823 1461 aa10.96□□□□□ -0.65
UBE4B-204ENST00000462658 PHLDB1Q86UU1 1377 aa10.96□□□□□ -0.65
UBE4B-204ENST00000462658 TNFRSF10BO14763 440 aa10.96□□□□□ -0.65
UBE4B-204ENST00000462658 ZNF211Q13398 564 aaPredicted RBP10.96□□□□□ -0.65
UBE4B-204ENST00000462658 SV2AQ7L0J3 742 aa10.96□□□□□ -0.65
UBE4B-204ENST00000462658 NLRP8Q86W28 1048 aa10.96□□□□□ -0.65
UBE4B-204ENST00000462658 GPR161Q8N6U8 529 aaKnown RBP10.96□□□□□ -0.65
UBE4B-204ENST00000462658 GPC6Q9Y625 555 aaPredicted RBP10.96□□□□□ -0.65
UBE4B-204ENST00000462658 MAGI3Q5TCQ9 1506 aa10.95□□□□□ -0.66
UBE4B-204ENST00000462658 ERBB4Q15303 1308 aa10.95□□□□□ -0.66
UBE4B-204ENST00000462658 PLEKHD1A6NEE1 506 aa10.95□□□□□ -0.66
UBE4B-204ENST00000462658 LBRQ14739 615 aaKnown RBP10.95□□□□□ -0.66
UBE4B-204ENST00000462658 NPAS3Q8IXF0 933 aa10.95□□□□□ -0.66
UBE4B-204ENST00000462658 NANOS1Q8WY41 292 aaKnown RBP10.95□□□□□ -0.66
UBE4B-204ENST00000462658 MTMR7Q9Y216 660 aa10.95□□□□□ -0.66
UBE4B-204ENST00000462658 MAP3K4Q9Y6R4 1608 aa10.95□□□□□ -0.66
UBE4B-204ENST00000462658 RRBP1Q9P2E9 1410 aaKnown RBP10.94□□□□□ -0.66
UBE4B-204ENST00000462658 NFX1Q12986 1120 aaKnown RBP10.94□□□□□ -0.66
UBE4B-204ENST00000462658 HELQQ8TDG4 1101 aa10.94□□□□□ -0.66
UBE4B-204ENST00000462658 IFT43Q96FT9 208 aa10.94□□□□□ -0.66
UBE4B-204ENST00000462658 GMCL1Q96IK5 515 aa10.94□□□□□ -0.66
UBE4B-204ENST00000462658 NCOA2Q15596 1464 aa10.93□□□□□ -0.66
UBE4B-204ENST00000462658 CCNB3Q8WWL7 1395 aa10.93□□□□□ -0.66
UBE4B-204ENST00000462658 DCDC2BA2VCK2 349 aa10.93□□□□□ -0.66
UBE4B-204ENST00000462658 ATXN7O15265 892 aaPredicted RBP10.93□□□□□ -0.66
UBE4B-204ENST00000462658 ANKIB1Q9P2G1 1089 aa10.93□□□□□ -0.66
UBE4B-204ENST00000462658 IVNS1ABPQ9Y6Y0 642 aa10.93□□□□□ -0.66
UBE4B-204ENST00000462658 TGFBR3LH3BV60 316 aa10.92□□□□□ -0.66
UBE4B-204ENST00000462658 BNIP3LO60238 219 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms