RNA–Protein interactions for RNA: ENST00000462577.5

PDCD4-204, Transcript of programmed cell death 4, humanhuman

TSL 5

Gene PDCD4, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-204ENST00000462577 COL24A1Q17RW2 1714 aa7.03□□□□□ -1.28
PDCD4-204ENST00000462577 KDRP35968 1356 aa7.03□□□□□ -1.28
PDCD4-204ENST00000462577 KDM3BQ7LBC6 1761 aa7.03□□□□□ -1.28
PDCD4-204ENST00000462577 IGSF1Q8N6C5 1336 aa7.02□□□□□ -1.28
PDCD4-204ENST00000462577 RNF223E7ERA6 249 aa7.02□□□□□ -1.29
PDCD4-204ENST00000462577 CSB-PGBD3P0DP91 1061 aa7.02□□□□□ -1.29
PDCD4-204ENST00000462577 THAP11Q96EK4 314 aa7.02□□□□□ -1.29
PDCD4-204ENST00000462577 SLC6A16Q9GZN6 736 aa7.02□□□□□ -1.29
PDCD4-204ENST00000462577 LAMB4A4D0S4 1761 aa7.01□□□□□ -1.29
PDCD4-204ENST00000462577 FMNL1O95466 1100 aaPredicted RBP7.01□□□□□ -1.29
PDCD4-204ENST00000462577 IL2RBP14784 551 aa7.01□□□□□ -1.29
PDCD4-204ENST00000462577 CC2D1BQ5T0F9 858 aaKnown RBP7.01□□□□□ -1.29
PDCD4-204ENST00000462577 KRT27Q7Z3Y8 459 aa7.01□□□□□ -1.29
PDCD4-204ENST00000462577 PARP9Q8IXQ6 854 aa7.01□□□□□ -1.29
PDCD4-204ENST00000462577 PRKD2Q9BZL6 878 aa7.01□□□□□ -1.29
PDCD4-204ENST00000462577 TJP1Q07157 1748 aa7.01□□□□□ -1.29
PDCD4-204ENST00000462577 UBR3Q6ZT12 1888 aa7□□□□□ -1.29
PDCD4-204ENST00000462577 CASZ1Q86V15 1759 aa7□□□□□ -1.29
PDCD4-204ENST00000462577 MRC1P22897 1456 aa7□□□□□ -1.29
PDCD4-204ENST00000462577 HOXA2O43364 376 aa7□□□□□ -1.29
PDCD4-204ENST00000462577 GUCA2AQ02747 115 aa7□□□□□ -1.29
PDCD4-204ENST00000462577 PDE4DQ08499 809 aa7□□□□□ -1.29
PDCD4-204ENST00000462577 EIF4A2Q14240 407 aaKnown RBP7□□□□□ -1.29
PDCD4-204ENST00000462577 DDB1Q16531 1140 aa7□□□□□ -1.29
PDCD4-204ENST00000462577 NBPF6Q5VWK0 638 aa7□□□□□ -1.29
PDCD4-204ENST00000462577 BRICD5Q6PL45 260 aa7□□□□□ -1.29
PDCD4-204ENST00000462577 RNF19BQ6ZMZ0 732 aa7□□□□□ -1.29
PDCD4-204ENST00000462577 NUTM1Q86Y26 1132 aa7□□□□□ -1.29
PDCD4-204ENST00000462577 CCDC125Q86Z20 511 aa7□□□□□ -1.29
PDCD4-204ENST00000462577 NBPF4Q96M43 638 aa7□□□□□ -1.29
PDCD4-204ENST00000462577 NLRP2Q9NX02 1062 aa7□□□□□ -1.29
PDCD4-204ENST00000462577 USP35Q9P2H5 1018 aa7□□□□□ -1.29
PDCD4-204ENST00000462577 PPP2R1AP30153 589 aa6.99□□□□□ -1.29
PDCD4-204ENST00000462577 IL13P35225 146 aa6.99□□□□□ -1.29
PDCD4-204ENST00000462577 TNNT2P45379 298 aaPredicted RBP6.99□□□□□ -1.29
PDCD4-204ENST00000462577 MTHFSP49914 203 aa6.99□□□□□ -1.29
PDCD4-204ENST00000462577 USP46P62068 366 aa6.99□□□□□ -1.29
PDCD4-204ENST00000462577 RALBP1Q15311 655 aa6.99□□□□□ -1.29
PDCD4-204ENST00000462577 FAM196AQ6ZSG2 479 aa6.99□□□□□ -1.29
PDCD4-204ENST00000462577 FAM160A2Q8N612 972 aaPredicted RBP6.99□□□□□ -1.29
PDCD4-204ENST00000462577 LTV1Q96GA3 475 aaPredicted RBP6.99□□□□□ -1.29
PDCD4-204ENST00000462577 SALL2Q9Y467 1007 aaPredicted RBP6.99□□□□□ -1.29
PDCD4-204ENST00000462577 PPM1GO15355 546 aaPredicted RBP6.98□□□□□ -1.29
PDCD4-204ENST00000462577 MS4A1P11836 297 aa6.98□□□□□ -1.29
PDCD4-204ENST00000462577 DDX10Q13206 875 aaKnown RBP6.98□□□□□ -1.29
PDCD4-204ENST00000462577 PDE3BQ13370 1112 aa6.98□□□□□ -1.29
PDCD4-204ENST00000462577 SPIRE2Q8WWL2 714 aa6.98□□□□□ -1.29
PDCD4-204ENST00000462577 BEGAINQ9BUH8 593 aa6.98□□□□□ -1.29
PDCD4-204ENST00000462577 CACNA1FO60840 1977 aa6.98□□□□□ -1.29
PDCD4-204ENST00000462577 PCDH11XQ9BZA7 1347 aa6.98□□□□□ -1.29
PDCD4-204ENST00000462577 PCDH11YQ9BZA8 1340 aa6.98□□□□□ -1.29
PDCD4-204ENST00000462577 EXOC5O00471 708 aa6.97□□□□□ -1.29
PDCD4-204ENST00000462577 DIAPH1O60610 1272 aaKnown RBP6.97□□□□□ -1.29
PDCD4-204ENST00000462577 C4AP0C0L4 1744 aa6.97□□□□□ -1.29
PDCD4-204ENST00000462577 C4BP0C0L5 1744 aa6.97□□□□□ -1.29
PDCD4-204ENST00000462577 MYT1Q01538 1121 aa6.97□□□□□ -1.29
PDCD4-204ENST00000462577 Q3C1V9 767 aa6.97□□□□□ -1.29
PDCD4-204ENST00000462577 MARCH10Q8NA82 808 aaPredicted RBP6.97□□□□□ -1.29
PDCD4-204ENST00000462577 ANKLE1Q8NAG6 615 aa6.97□□□□□ -1.29
PDCD4-204ENST00000462577 RAPGEF4Q8WZA2 1011 aa6.97□□□□□ -1.29
PDCD4-204ENST00000462577 EMID1Q96A84 441 aaPredicted RBP6.97□□□□□ -1.29
PDCD4-204ENST00000462577 CFAP53Q96M91 514 aa6.97□□□□□ -1.29
PDCD4-204ENST00000462577 IRX2Q9BZI1 471 aaPredicted RBP6.97□□□□□ -1.29
PDCD4-204ENST00000462577 PRDM9Q9NQV7 894 aa6.97□□□□□ -1.29
PDCD4-204ENST00000462577 V9GY48 417 aaPredicted RBP6.97□□□□□ -1.29
PDCD4-204ENST00000462577 LRP5O75197 1615 aa6.97□□□□□ -1.29
PDCD4-204ENST00000462577 MYBBP1AQ9BQG0 1328 aaKnown RBP6.97□□□□□ -1.29
PDCD4-204ENST00000462577 TATP17735 454 aaPredicted RBP6.96□□□□□ -1.3
PDCD4-204ENST00000462577 NDUFV2P19404 249 aa6.96□□□□□ -1.3
PDCD4-204ENST00000462577 USHBP1Q8N6Y0 703 aa6.96□□□□□ -1.3
PDCD4-204ENST00000462577 ZCRB1Q8TBF4 217 aaKnown RBP6.96□□□□□ -1.3
PDCD4-204ENST00000462577 SYMPKQ92797 1274 aaKnown RBP6.96□□□□□ -1.3
PDCD4-204ENST00000462577 PRKRIP1Q9H875 184 aaPredicted RBP6.96□□□□□ -1.3
PDCD4-204ENST00000462577 MYH14Q7Z406 1995 aaKnown RBP6.96□□□□□ -1.3
PDCD4-204ENST00000462577 SLC19A1P41440 591 aa6.95□□□□□ -1.3
PDCD4-204ENST00000462577 PLA2G2CQ5R387 149 aa6.95□□□□□ -1.3
PDCD4-204ENST00000462577 PCDHGC3Q9UN70 934 aa6.95□□□□□ -1.3
PDCD4-204ENST00000462577 SPG7Q9UQ90 795 aa6.95□□□□□ -1.3
PDCD4-204ENST00000462577 KDM6AO15550 1401 aaPredicted RBP6.94□□□□□ -1.3
PDCD4-204ENST00000462577 MOXD2PA6NHM9 499 aa6.94□□□□□ -1.3
PDCD4-204ENST00000462577 FDX1P10109 184 aa6.94□□□□□ -1.3
PDCD4-204ENST00000462577 MSS51Q4VC12 460 aa6.94□□□□□ -1.3
PDCD4-204ENST00000462577 AMOTQ4VCS5 1084 aa6.94□□□□□ -1.3
PDCD4-204ENST00000462577 LIAT1Q6ZQX7 453 aa6.94□□□□□ -1.3
PDCD4-204ENST00000462577 USB1Q9BQ65 265 aaKnown RBP6.94□□□□□ -1.3
PDCD4-204ENST00000462577 BCORQ6W2J9 1755 aa6.94□□□□□ -1.3
PDCD4-204ENST00000462577 CYP27B1O15528 508 aa6.93□□□□□ -1.3
PDCD4-204ENST00000462577 PHKG2P15735 406 aa6.93□□□□□ -1.3
PDCD4-204ENST00000462577 FAM182BQ5T319 152 aa6.93□□□□□ -1.3
PDCD4-204ENST00000462577 SULT6B1Q6IMI4 303 aa6.93□□□□□ -1.3
PDCD4-204ENST00000462577 AEBP1Q8IUX7 1158 aa6.93□□□□□ -1.3
PDCD4-204ENST00000462577 IFNL2Q8IZJ0 200 aa6.93□□□□□ -1.3
PDCD4-204ENST00000462577 TBC1D2Q9BYX2 928 aa6.93□□□□□ -1.3
PDCD4-204ENST00000462577 NUDCQ9Y266 331 aa6.93□□□□□ -1.3
PDCD4-204ENST00000462577 FCF1Q9Y324 198 aaKnown RBP6.93□□□□□ -1.3
PDCD4-204ENST00000462577 ANKRD36CQ5JPF3 1778 aa6.92□□□□□ -1.3
PDCD4-204ENST00000462577 KCPQ6ZWJ8 1503 aa6.92□□□□□ -1.3
PDCD4-204ENST00000462577 PLSCR1O15162 318 aa6.92□□□□□ -1.3
PDCD4-204ENST00000462577 TRIM37O94972 964 aa6.92□□□□□ -1.3
PDCD4-204ENST00000462577 HSP90AB1P08238 724 aaKnown RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms