RNA–Protein interactions for RNA: ENST00000462257.1

SH3D19-205, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 882 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-205ENST00000462257 RFC4P35249 363 aa9.8□□□□□ -0.84
SH3D19-205ENST00000462257 PRELPP51888 382 aa9.8□□□□□ -0.84
SH3D19-205ENST00000462257 COL13A1Q5TAT6 717 aaPredicted RBP9.8□□□□□ -0.84
SH3D19-205ENST00000462257 C9orf131Q5VYM1 1079 aa9.8□□□□□ -0.84
SH3D19-205ENST00000462257 TNS4Q8IZW8 715 aa9.8□□□□□ -0.84
SH3D19-205ENST00000462257 CCER1Q8TC90 406 aaPredicted RBP9.8□□□□□ -0.84
SH3D19-205ENST00000462257 ASAP1Q9ULH1 1129 aa9.8□□□□□ -0.84
SH3D19-205ENST00000462257 C10orf71Q711Q0 1435 aa9.8□□□□□ -0.84
SH3D19-205ENST00000462257 BRCA1P38398 1863 aaKnown RBP9.79□□□□□ -0.84
SH3D19-205ENST00000462257 TONSLQ96HA7 1378 aa9.79□□□□□ -0.84
SH3D19-205ENST00000462257 DPEP1P16444 411 aa9.79□□□□□ -0.84
SH3D19-205ENST00000462257 ITPK1Q13572 414 aa9.79□□□□□ -0.84
SH3D19-205ENST00000462257 ZNF787Q6DD87 383 aa9.79□□□□□ -0.84
SH3D19-205ENST00000462257 SMIM5Q71RC9 77 aa9.79□□□□□ -0.84
SH3D19-205ENST00000462257 SMC1BQ8NDV3 1235 aa9.79□□□□□ -0.84
SH3D19-205ENST00000462257 CDCA7LQ96GN5 454 aa9.79□□□□□ -0.84
SH3D19-205ENST00000462257 LRCH3Q96II8 777 aa9.79□□□□□ -0.84
SH3D19-205ENST00000462257 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.79□□□□□ -0.84
SH3D19-205ENST00000462257 FAM198AQ9UFP1 575 aa9.79□□□□□ -0.84
SH3D19-205ENST00000462257 TIMELESSQ9UNS1 1208 aa9.79□□□□□ -0.84
SH3D19-205ENST00000462257 KIF20BQ96Q89 1820 aa9.79□□□□□ -0.84
SH3D19-205ENST00000462257 ZC3H4Q9UPT8 1303 aaKnown RBP9.79□□□□□ -0.84
SH3D19-205ENST00000462257 C4AP0C0L4 1744 aa9.79□□□□□ -0.84
SH3D19-205ENST00000462257 TNRC6CQ9HCJ0 1690 aaKnown RBP9.78□□□□□ -0.84
SH3D19-205ENST00000462257 ERVV-2B6SEH9 535 aa9.78□□□□□ -0.84
SH3D19-205ENST00000462257 RPS6KA4O75676 772 aa9.78□□□□□ -0.84
SH3D19-205ENST00000462257 HSP90AB1P08238 724 aaKnown RBP9.78□□□□□ -0.84
SH3D19-205ENST00000462257 PRSS12P56730 875 aa9.78□□□□□ -0.84
SH3D19-205ENST00000462257 DALRD3Q5D0E6 543 aaKnown RBP9.78□□□□□ -0.84
SH3D19-205ENST00000462257 PACS2Q86VP3 889 aa9.78□□□□□ -0.84
SH3D19-205ENST00000462257 ARHGEF1Q92888 912 aaKnown RBP9.78□□□□□ -0.84
SH3D19-205ENST00000462257 PRKD2Q9BZL6 878 aa9.78□□□□□ -0.84
SH3D19-205ENST00000462257 ATG3Q9NT62 314 aa9.78□□□□□ -0.84
SH3D19-205ENST00000462257 HPS5Q9UPZ3 1129 aa9.78□□□□□ -0.84
SH3D19-205ENST00000462257 NCAPD2Q15021 1401 aa9.78□□□□□ -0.84
SH3D19-205ENST00000462257 GYS1P13807 737 aa9.77□□□□□ -0.85
SH3D19-205ENST00000462257 PHKG2P15735 406 aa9.77□□□□□ -0.85
SH3D19-205ENST00000462257 KCNA3P22001 575 aa9.77□□□□□ -0.85
SH3D19-205ENST00000462257 DCAF5Q96JK2 942 aa9.77□□□□□ -0.85
SH3D19-205ENST00000462257 RRAGCQ9HB90 399 aa9.77□□□□□ -0.85
SH3D19-205ENST00000462257 WASHC2AQ641Q2 1341 aa9.77□□□□□ -0.85
SH3D19-205ENST00000462257 CNTNAP4Q9C0A0 1308 aa9.77□□□□□ -0.85
SH3D19-205ENST00000462257 PPM1GO15355 546 aaPredicted RBP9.76□□□□□ -0.85
SH3D19-205ENST00000462257 KCNV2Q8TDN2 545 aa9.76□□□□□ -0.85
SH3D19-205ENST00000462257 CDHR5Q9HBB8 845 aa9.76□□□□□ -0.85
SH3D19-205ENST00000462257 RNF181Q9P0P0 153 aa9.76□□□□□ -0.85
SH3D19-205ENST00000462257 SBF1O95248 1867 aa9.75□□□□□ -0.85
SH3D19-205ENST00000462257 C3orf80F5H4A9 247 aa9.75□□□□□ -0.85
SH3D19-205ENST00000462257 VEGFAP15692 232 aaPredicted RBP9.75□□□□□ -0.85
SH3D19-205ENST00000462257 EYA1Q99502 592 aa9.75□□□□□ -0.85
SH3D19-205ENST00000462257 EMILIN1Q9Y6C2 1016 aa9.75□□□□□ -0.85
SH3D19-205ENST00000462257 KCPQ6ZWJ8 1503 aa9.75□□□□□ -0.85
SH3D19-205ENST00000462257 COL5A3P25940 1745 aaPredicted RBP9.74□□□□□ -0.85
SH3D19-205ENST00000462257 KDRP35968 1356 aa9.74□□□□□ -0.85
SH3D19-205ENST00000462257 ANKRD26Q9UPS8 1709 aa9.73□□□□□ -0.85
SH3D19-205ENST00000462257 GLTPD2A6NH11 291 aa9.73□□□□□ -0.85
SH3D19-205ENST00000462257 HTRA3P83110 453 aa9.73□□□□□ -0.85
SH3D19-205ENST00000462257 NPDC1Q9NQX5 325 aaPredicted RBP9.73□□□□□ -0.85
SH3D19-205ENST00000462257 LMNB1P20700 586 aa9.72□□□□□ -0.85
SH3D19-205ENST00000462257 CABP4P57796 275 aa9.72□□□□□ -0.85
SH3D19-205ENST00000462257 AMOTQ4VCS5 1084 aa9.72□□□□□ -0.85
SH3D19-205ENST00000462257 PLEKHO1Q53GL0 409 aaPredicted RBP9.72□□□□□ -0.85
SH3D19-205ENST00000462257 SLC4A9Q96Q91 983 aa9.72□□□□□ -0.85
SH3D19-205ENST00000462257 RBM27Q9P2N5 1060 aaKnown RBP9.72□□□□□ -0.85
SH3D19-205ENST00000462257 SMAPO00193 183 aa9.71□□□□□ -0.86
SH3D19-205ENST00000462257 ZPR1O75312 459 aa9.71□□□□□ -0.86
SH3D19-205ENST00000462257 HSPA1AP0DMV8 641 aaKnown RBP9.71□□□□□ -0.86
SH3D19-205ENST00000462257 HSPA1BP0DMV9 641 aaKnown RBP9.71□□□□□ -0.86
SH3D19-205ENST00000462257 MLLT3P42568 568 aaPredicted RBP9.71□□□□□ -0.86
SH3D19-205ENST00000462257 PPP4CP60510 307 aa9.71□□□□□ -0.86
SH3D19-205ENST00000462257 TTC13Q8NBP0 860 aa9.71□□□□□ -0.86
SH3D19-205ENST00000462257 V9GY48 417 aaPredicted RBP9.71□□□□□ -0.86
SH3D19-205ENST00000462257 USP42Q9H9J4 1324 aaKnown RBP9.71□□□□□ -0.86
SH3D19-205ENST00000462257 MYH14Q7Z406 1995 aaKnown RBP9.7□□□□□ -0.86
SH3D19-205ENST00000462257 TM4SF1P30408 202 aa9.7□□□□□ -0.86
SH3D19-205ENST00000462257 CRKLP46109 303 aaKnown RBP9.7□□□□□ -0.86
SH3D19-205ENST00000462257 TATDN2Q93075 761 aa9.7□□□□□ -0.86
SH3D19-205ENST00000462257 CARD14Q9BXL6 1004 aa9.7□□□□□ -0.86
SH3D19-205ENST00000462257 POLKQ9UBT6 870 aa9.7□□□□□ -0.86
SH3D19-205ENST00000462257 KDM6AO15550 1401 aaPredicted RBP9.69□□□□□ -0.86
SH3D19-205ENST00000462257 PTCD1O75127 700 aaKnown RBP9.69□□□□□ -0.86
SH3D19-205ENST00000462257 MTHFSP49914 203 aa9.69□□□□□ -0.86
SH3D19-205ENST00000462257 C1orf141Q5JVX7 400 aa9.69□□□□□ -0.86
SH3D19-205ENST00000462257 NBPF26B4DH59 902 aa9.68□□□□□ -0.86
SH3D19-205ENST00000462257 POLRMTO00411 1230 aaKnown RBP9.68□□□□□ -0.86
SH3D19-205ENST00000462257 CHRNA5P30532 468 aa9.68□□□□□ -0.86
SH3D19-205ENST00000462257 DDR1Q08345 913 aa9.68□□□□□ -0.86
SH3D19-205ENST00000462257 EIF4A2Q14240 407 aaKnown RBP9.68□□□□□ -0.86
SH3D19-205ENST00000462257 ZNF530Q6P9A1 599 aaPredicted RBP9.68□□□□□ -0.86
SH3D19-205ENST00000462257 TTLL6Q8N841 843 aa9.68□□□□□ -0.86
SH3D19-205ENST00000462257 ZNF775Q96BV0 537 aaPredicted RBP9.68□□□□□ -0.86
SH3D19-205ENST00000462257 PNMA3Q9UL41 463 aa9.68□□□□□ -0.86
SH3D19-205ENST00000462257 PDZRN3Q9UPQ7 1066 aa9.68□□□□□ -0.86
SH3D19-205ENST00000462257 CCDC88AQ3V6T2 1871 aa9.68□□□□□ -0.86
SH3D19-205ENST00000462257 H0YIN7 160 aa9.67□□□□□ -0.86
SH3D19-205ENST00000462257 SAMD7Q7Z3H4 446 aa9.67□□□□□ -0.86
SH3D19-205ENST00000462257 NFATC2IPQ8NCF5 419 aa9.67□□□□□ -0.86
SH3D19-205ENST00000462257 SRP68Q9UHB9 627 aaKnown RBP9.67□□□□□ -0.86
SH3D19-205ENST00000462257 DLEC1Q9Y238 1755 aa9.66□□□□□ -0.86
SH3D19-205ENST00000462257 PLCB2Q00722 1185 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 369.3 ms