RNA–Protein interactions for RNA: ENST00000462018.1

GABRE-204, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 3

Gene GABRE, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-204ENST00000462018 CHRDL2Q6WN34 429 aa11.17□□□□□ -0.62
GABRE-204ENST00000462018 ZNF296Q8WUU4 475 aaPredicted RBP11.17□□□□□ -0.62
GABRE-204ENST00000462018 HDAC9Q9UKV0 1011 aa11.17□□□□□ -0.62
GABRE-204ENST00000462018 PDZRN3Q9UPQ7 1066 aa11.17□□□□□ -0.62
GABRE-204ENST00000462018 RGMBQ6NW40 437 aa11.16□□□□□ -0.62
GABRE-204ENST00000462018 CSRNP1Q96S65 589 aa11.16□□□□□ -0.62
GABRE-204ENST00000462018 SNED1Q8TER0 1413 aa11.16□□□□□ -0.62
GABRE-204ENST00000462018 VCANP13611 3396 aa11.16□□□□□ -0.62
GABRE-204ENST00000462018 LAMB4A4D0S4 1761 aa11.16□□□□□ -0.62
GABRE-204ENST00000462018 TONSLQ96HA7 1378 aa11.16□□□□□ -0.62
GABRE-204ENST00000462018 LAMA3Q16787 3333 aa11.15□□□□□ -0.62
GABRE-204ENST00000462018 ERVV-2B6SEH9 535 aa11.15□□□□□ -0.62
GABRE-204ENST00000462018 TBC1D9BQ66K14 1250 aa11.15□□□□□ -0.62
GABRE-204ENST00000462018 DNAJC10Q8IXB1 793 aa11.15□□□□□ -0.62
GABRE-204ENST00000462018 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.15□□□□□ -0.62
GABRE-204ENST00000462018 RBM27Q9P2N5 1060 aaKnown RBP11.15□□□□□ -0.62
GABRE-204ENST00000462018 FARP1Q9Y4F1 1045 aaPredicted RBP11.15□□□□□ -0.62
GABRE-204ENST00000462018 EN2P19622 333 aaPredicted RBP11.14□□□□□ -0.63
GABRE-204ENST00000462018 EIF6P56537 245 aaKnown RBP11.14□□□□□ -0.63
GABRE-204ENST00000462018 MASTLQ96GX5 879 aa11.14□□□□□ -0.63
GABRE-204ENST00000462018 TERF2IPQ9NYB0 399 aa11.14□□□□□ -0.63
GABRE-204ENST00000462018 ZBTB1Q9Y2K1 713 aa11.14□□□□□ -0.63
GABRE-204ENST00000462018 SPTBN5Q9NRC6 3674 aaKnown RBP11.13□□□□□ -0.63
GABRE-204ENST00000462018 SLC10A3P09131 477 aa11.12□□□□□ -0.63
GABRE-204ENST00000462018 FXR2P51116 673 aaKnown RBP eCLIP11.12□□□□□ -0.63
GABRE-204ENST00000462018 CABP4P57796 275 aa11.12□□□□□ -0.63
GABRE-204ENST00000462018 BBXQ8WY36 941 aaPredicted RBP11.12□□□□□ -0.63
GABRE-204ENST00000462018 RNF25Q96BH1 459 aaPredicted RBP11.12□□□□□ -0.63
GABRE-204ENST00000462018 TSPYL2Q9H2G4 693 aaPredicted RBP11.12□□□□□ -0.63
GABRE-204ENST00000462018 ADARB2Q9NS39 739 aaKnown RBP11.12□□□□□ -0.63
GABRE-204ENST00000462018 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.12□□□□□ -0.63
GABRE-204ENST00000462018 SOX1O00570 391 aaPredicted RBP11.11□□□□□ -0.63
GABRE-204ENST00000462018 TBC1D8O95759 1140 aa11.11□□□□□ -0.63
GABRE-204ENST00000462018 CYP19A1P11511 503 aaPredicted RBP11.11□□□□□ -0.63
GABRE-204ENST00000462018 ZNF157P51786 506 aaPredicted RBP11.11□□□□□ -0.63
GABRE-204ENST00000462018 JDP2Q8WYK2 163 aa11.11□□□□□ -0.63
GABRE-204ENST00000462018 GPRC5DQ9NZD1 345 aa11.11□□□□□ -0.63
GABRE-204ENST00000462018 RAB3GAP2Q9H2M9 1393 aa11.11□□□□□ -0.63
GABRE-204ENST00000462018 KIF20BQ96Q89 1820 aa11.1□□□□□ -0.63
GABRE-204ENST00000462018 PYGBP11216 843 aa11.1□□□□□ -0.63
GABRE-204ENST00000462018 RTKN2Q8IZC4 609 aa11.1□□□□□ -0.63
GABRE-204ENST00000462018 CNBD1Q8NA66 436 aa11.1□□□□□ -0.63
GABRE-204ENST00000462018 TRPM4Q8TD43 1214 aa11.1□□□□□ -0.63
GABRE-204ENST00000462018 CCDC102AQ96A19 550 aa11.1□□□□□ -0.63
GABRE-204ENST00000462018 EYA1Q99502 592 aa11.1□□□□□ -0.63
GABRE-204ENST00000462018 GGNBP2Q9H3C7 697 aa11.1□□□□□ -0.63
GABRE-204ENST00000462018 PRDM6Q9NQX0 595 aa11.1□□□□□ -0.63
GABRE-204ENST00000462018 PGAP2Q9UHJ9 254 aa11.1□□□□□ -0.63
GABRE-204ENST00000462018 KIF24Q5T7B8 1368 aa11.09□□□□□ -0.63
GABRE-204ENST00000462018 HIRAP54198 1017 aaPredicted RBP11.09□□□□□ -0.63
GABRE-204ENST00000462018 SLC51AQ86UW1 340 aa11.09□□□□□ -0.63
GABRE-204ENST00000462018 LRCH3Q96II8 777 aa11.09□□□□□ -0.63
GABRE-204ENST00000462018 GBA2Q9HCG7 927 aaPredicted RBP11.09□□□□□ -0.63
GABRE-204ENST00000462018 EMILIN1Q9Y6C2 1016 aa11.09□□□□□ -0.63
GABRE-204ENST00000462018 RIOK3O14730 519 aaKnown RBP11.08□□□□□ -0.64
GABRE-204ENST00000462018 CDC37L1Q7L3B6 337 aa11.08□□□□□ -0.64
GABRE-204ENST00000462018 USP48Q86UV5 1035 aa11.08□□□□□ -0.64
GABRE-204ENST00000462018 PIP4P2Q8N4L2 257 aa11.08□□□□□ -0.64
GABRE-204ENST00000462018 RAPGEFL1Q9UHV5 662 aa11.08□□□□□ -0.64
GABRE-204ENST00000462018 GPR25O00155 361 aa11.07□□□□□ -0.64
GABRE-204ENST00000462018 ST5P78524 1137 aa11.07□□□□□ -0.64
GABRE-204ENST00000462018 RASAL3Q86YV0 1011 aa11.07□□□□□ -0.64
GABRE-204ENST00000462018 PRO3102Q9H379 93 aa11.07□□□□□ -0.64
GABRE-204ENST00000462018 ROCK2O75116 1388 aaKnown RBP11.06□□□□□ -0.64
GABRE-204ENST00000462018 SHTN1A0MZ66 631 aa11.06□□□□□ -0.64
GABRE-204ENST00000462018 NPHP1O15259 732 aa11.06□□□□□ -0.64
GABRE-204ENST00000462018 CHRM1P11229 460 aaPredicted RBP11.06□□□□□ -0.64
GABRE-204ENST00000462018 COL9A1P20849 921 aa11.06□□□□□ -0.64
GABRE-204ENST00000462018 CANXP27824 592 aaKnown RBP11.06□□□□□ -0.64
GABRE-204ENST00000462018 INTS3Q68E01 1043 aaKnown RBP11.06□□□□□ -0.64
GABRE-204ENST00000462018 NFATC2IPQ8NCF5 419 aa11.06□□□□□ -0.64
GABRE-204ENST00000462018 PSMD1Q99460 953 aa11.06□□□□□ -0.64
GABRE-204ENST00000462018 POLR2AP24928 1970 aaKnown RBP11.06□□□□□ -0.64
GABRE-204ENST00000462018 MRC1P22897 1456 aa11.06□□□□□ -0.64
GABRE-204ENST00000462018 FYB1O15117 783 aa11.05□□□□□ -0.64
GABRE-204ENST00000462018 HSP90AB1P08238 724 aaKnown RBP11.05□□□□□ -0.64
GABRE-204ENST00000462018 NPR1P16066 1061 aa11.05□□□□□ -0.64
GABRE-204ENST00000462018 GMPSP49915 693 aaPredicted RBP11.05□□□□□ -0.64
GABRE-204ENST00000462018 LARGE2Q8N3Y3 721 aa11.05□□□□□ -0.64
GABRE-204ENST00000462018 ADM5C9JUS6 153 aa11.04□□□□□ -0.64
GABRE-204ENST00000462018 ZNF530Q6P9A1 599 aaPredicted RBP11.04□□□□□ -0.64
GABRE-204ENST00000462018 C2orf69Q8N8R5 385 aa11.04□□□□□ -0.64
GABRE-204ENST00000462018 ZC3H15Q8WU90 426 aaKnown RBP11.04□□□□□ -0.64
GABRE-204ENST00000462018 R3HDMLQ9H3Y0 253 aa11.04□□□□□ -0.64
GABRE-204ENST00000462018 NPC1L1Q9UHC9 1359 aa11.03□□□□□ -0.64
GABRE-204ENST00000462018 EIF5P55010 431 aaKnown RBP11.03□□□□□ -0.64
GABRE-204ENST00000462018 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.03□□□□□ -0.64
GABRE-204ENST00000462018 TRIM17Q9Y577 477 aa11.03□□□□□ -0.64
GABRE-204ENST00000462018 ERBB4Q15303 1308 aa11.03□□□□□ -0.64
GABRE-204ENST00000462018 FKTNO75072 461 aa11.02□□□□□ -0.65
GABRE-204ENST00000462018 NOM1Q5C9Z4 860 aaKnown RBP11.02□□□□□ -0.65
GABRE-204ENST00000462018 NIM1KQ8IY84 436 aa11.02□□□□□ -0.65
GABRE-204ENST00000462018 TAOK2Q9UL54 1235 aa11.02□□□□□ -0.65
GABRE-204ENST00000462018 TBC1D2BQ9UPU7 963 aa11.02□□□□□ -0.65
GABRE-204ENST00000462018 UBR2Q8IWV8 1755 aa11.02□□□□□ -0.65
GABRE-204ENST00000462018 ST20-MTHFSA0A0A6YYL1 179 aa11.01□□□□□ -0.65
GABRE-204ENST00000462018 PPM1GO15355 546 aaPredicted RBP11.01□□□□□ -0.65
GABRE-204ENST00000462018 PLA2G5P39877 138 aa11.01□□□□□ -0.65
GABRE-204ENST00000462018 MTHFSP49914 203 aa11.01□□□□□ -0.65
GABRE-204ENST00000462018 Q7L0L9 218 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms