RNA–Protein interactions for RNA: ENST00000461974.1

FN1-215, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-215ENST00000461974 ATCAYQ86WG3 371 aa6.88□□□□□ -1.31
FN1-215ENST00000461974 EDEM1Q92611 657 aa6.88□□□□□ -1.31
FN1-215ENST00000461974 GAS2L1Q99501 681 aaPredicted RBP6.88□□□□□ -1.31
FN1-215ENST00000461974 EFCC1Q9HA90 598 aa6.88□□□□□ -1.31
FN1-215ENST00000461974 GPAMQ9HCL2 828 aa6.88□□□□□ -1.31
FN1-215ENST00000461974 POLIQ9UNA4 740 aa6.88□□□□□ -1.31
FN1-215ENST00000461974 GJA3Q9Y6H8 435 aa6.88□□□□□ -1.31
FN1-215ENST00000461974 THBS1P07996 1170 aa6.87□□□□□ -1.31
FN1-215ENST00000461974 ITGA6P23229 1130 aa6.87□□□□□ -1.31
FN1-215ENST00000461974 AAMPQ13685 434 aa6.87□□□□□ -1.31
FN1-215ENST00000461974 PDE12Q6L8Q7 609 aaKnown RBP6.87□□□□□ -1.31
FN1-215ENST00000461974 Q6ZNB5 142 aa6.87□□□□□ -1.31
FN1-215ENST00000461974 FBXO33Q7Z6M2 555 aa6.87□□□□□ -1.31
FN1-215ENST00000461974 NUCKS1Q9H1E3 243 aaKnown RBP6.87□□□□□ -1.31
FN1-215ENST00000461974 NDFIP2Q9NV92 336 aa6.87□□□□□ -1.31
FN1-215ENST00000461974 FNDC3AQ9Y2H6 1198 aaKnown RBP6.87□□□□□ -1.31
FN1-215ENST00000461974 PCDHGC4Q9Y5F7 938 aa6.87□□□□□ -1.31
FN1-215ENST00000461974 SOBPA7XYQ1 873 aa6.86□□□□□ -1.31
FN1-215ENST00000461974 GPR182O15218 404 aa6.86□□□□□ -1.31
FN1-215ENST00000461974 DNM1Q05193 864 aaKnown RBP6.86□□□□□ -1.31
FN1-215ENST00000461974 NPAS3Q8IXF0 933 aa6.86□□□□□ -1.31
FN1-215ENST00000461974 NANOS1Q8WY41 292 aaKnown RBP6.86□□□□□ -1.31
FN1-215ENST00000461974 NUDT16Q96DE0 195 aaKnown RBP6.86□□□□□ -1.31
FN1-215ENST00000461974 ZCCHC2Q9C0B9 1178 aaKnown RBP6.86□□□□□ -1.31
FN1-215ENST00000461974 BRD7Q9NPI1 651 aa6.86□□□□□ -1.31
FN1-215ENST00000461974 KCNMB2Q9Y691 235 aa6.86□□□□□ -1.31
FN1-215ENST00000461974 ATXN7O15265 892 aaPredicted RBP6.85□□□□□ -1.31
FN1-215ENST00000461974 NEFLP07196 543 aa6.85□□□□□ -1.31
FN1-215ENST00000461974 FAM182BQ5T319 152 aa6.85□□□□□ -1.31
FN1-215ENST00000461974 GPR152Q8TDT2 470 aa6.85□□□□□ -1.31
FN1-215ENST00000461974 ZNF837Q96EG3 531 aaPredicted RBP6.85□□□□□ -1.31
FN1-215ENST00000461974 CEP63Q96MT8 703 aa6.85□□□□□ -1.31
FN1-215ENST00000461974 RTCBQ9Y3I0 505 aaKnown RBP6.85□□□□□ -1.31
FN1-215ENST00000461974 C11orf95C9JLR9 678 aaPredicted RBP6.84□□□□□ -1.31
FN1-215ENST00000461974 SNRPBP14678 240 aaKnown RBP6.84□□□□□ -1.31
FN1-215ENST00000461974 GRNP28799 593 aaKnown RBP6.84□□□□□ -1.31
FN1-215ENST00000461974 DBN1Q16643 649 aa6.84□□□□□ -1.31
FN1-215ENST00000461974 CFHR5Q9BXR6 569 aa6.84□□□□□ -1.31
FN1-215ENST00000461974 DNAJC25Q9H1X3 360 aa6.84□□□□□ -1.31
FN1-215ENST00000461974 ATXN7L1Q9ULK2 861 aaPredicted RBP6.84□□□□□ -1.31
FN1-215ENST00000461974 TNP2Q05952 138 aa6.83□□□□□ -1.32
FN1-215ENST00000461974 TRIP4Q15650 581 aaPredicted RBP6.83□□□□□ -1.32
FN1-215ENST00000461974 RIPOR1Q6ZS17 1223 aa6.83□□□□□ -1.32
FN1-215ENST00000461974 FOXD4L4Q8WXT5 416 aaPredicted RBP6.83□□□□□ -1.32
FN1-215ENST00000461974 BCL2L13Q9BXK5 485 aa6.83□□□□□ -1.32
FN1-215ENST00000461974 CUEDC1Q9NWM3 386 aaPredicted RBP6.83□□□□□ -1.32
FN1-215ENST00000461974 PHF24Q9UPV7 400 aa6.83□□□□□ -1.32
FN1-215ENST00000461974 KCNH4Q9UQ05 1017 aa6.83□□□□□ -1.32
FN1-215ENST00000461974 BNIP3LO60238 219 aa6.82□□□□□ -1.32
FN1-215ENST00000461974 PPFIA3O75145 1194 aa6.82□□□□□ -1.32
FN1-215ENST00000461974 ENOX2Q16206 610 aaKnown RBP6.82□□□□□ -1.32
FN1-215ENST00000461974 EAPPQ56P03 285 aaPredicted RBP6.82□□□□□ -1.32
FN1-215ENST00000461974 TTC16Q8NEE8 873 aa6.82□□□□□ -1.32
FN1-215ENST00000461974 SNX29Q8TEQ0 813 aa6.82□□□□□ -1.32
FN1-215ENST00000461974 FBF1Q8TES7 1133 aa6.82□□□□□ -1.32
FN1-215ENST00000461974 GGNBP2Q9H3C7 697 aa6.82□□□□□ -1.32
FN1-215ENST00000461974 P4HBP07237 508 aaKnown RBP6.81□□□□□ -1.32
FN1-215ENST00000461974 MAPTP10636 758 aaKnown RBP6.81□□□□□ -1.32
FN1-215ENST00000461974 ZNF16P17020 682 aaPredicted RBP6.81□□□□□ -1.32
FN1-215ENST00000461974 PLCB3Q01970 1234 aa6.81□□□□□ -1.32
FN1-215ENST00000461974 ZNF326Q5BKZ1 582 aaKnown RBP6.81□□□□□ -1.32
FN1-215ENST00000461974 TMC1Q8TDI8 760 aa6.81□□□□□ -1.32
FN1-215ENST00000461974 MARK1Q9P0L2 795 aa6.81□□□□□ -1.32
FN1-215ENST00000461974 UBAP1LF5GYI3 381 aa6.8□□□□□ -1.32
FN1-215ENST00000461974 XYLBO75191 536 aa6.8□□□□□ -1.32
FN1-215ENST00000461974 VSIG8P0DPA2 414 aa6.8□□□□□ -1.32
FN1-215ENST00000461974 HOXD8P13378 290 aaPredicted RBP6.8□□□□□ -1.32
FN1-215ENST00000461974 VAMP1P23763 118 aa6.8□□□□□ -1.32
FN1-215ENST00000461974 ITGAEP38570 1179 aa6.8□□□□□ -1.32
FN1-215ENST00000461974 C8orf34Q49A92 452 aa6.8□□□□□ -1.32
FN1-215ENST00000461974 FOXR1Q6PIV2 292 aa6.8□□□□□ -1.32
FN1-215ENST00000461974 ZNF438Q7Z4V0 828 aa6.8□□□□□ -1.32
FN1-215ENST00000461974 NLRP13Q86W25 1043 aa6.8□□□□□ -1.32
FN1-215ENST00000461974 CMTR1Q8N1G2 835 aaKnown RBP6.8□□□□□ -1.32
FN1-215ENST00000461974 DCDC2BA2VCK2 349 aa6.79□□□□□ -1.32
FN1-215ENST00000461974 KHNYNO15037 678 aaKnown RBP6.79□□□□□ -1.32
FN1-215ENST00000461974 PRPF40AO75400 957 aaKnown RBP6.79□□□□□ -1.32
FN1-215ENST00000461974 TNFRSF21O75509 655 aa6.79□□□□□ -1.32
FN1-215ENST00000461974 CCINQ13939 588 aa6.79□□□□□ -1.32
FN1-215ENST00000461974 ALG1LQ6GMV1 187 aa6.79□□□□□ -1.32
FN1-215ENST00000461974 NPM2Q86SE8 214 aaKnown RBP6.79□□□□□ -1.32
FN1-215ENST00000461974 GIPC2Q8TF65 315 aa6.79□□□□□ -1.32
FN1-215ENST00000461974 PMEPA1Q969W9 287 aa6.79□□□□□ -1.32
FN1-215ENST00000461974 TRERF1Q96PN7 1200 aa6.79□□□□□ -1.32
FN1-215ENST00000461974 CSRNP1Q96S65 589 aa6.79□□□□□ -1.32
FN1-215ENST00000461974 GSX2Q9BZM3 304 aa6.79□□□□□ -1.32
FN1-215ENST00000461974 BCL11AQ9H165 835 aa6.79□□□□□ -1.32
FN1-215ENST00000461974 ELP3Q9H9T3 547 aa6.79□□□□□ -1.32
FN1-215ENST00000461974 AVENQ9NQS1 362 aaPredicted RBP6.79□□□□□ -1.32
FN1-215ENST00000461974 ABI2Q9NYB9 513 aaPredicted RBP6.79□□□□□ -1.32
FN1-215ENST00000461974 NXF1Q9UBU9 619 aaKnown RBP6.79□□□□□ -1.32
FN1-215ENST00000461974 CPNE3O75131 537 aaKnown RBP6.78□□□□□ -1.32
FN1-215ENST00000461974 MAP3K6O95382 1288 aa6.78□□□□□ -1.32
FN1-215ENST00000461974 FGFR3P22607 806 aa6.78□□□□□ -1.32
FN1-215ENST00000461974 SOX18P35713 384 aa6.78□□□□□ -1.32
FN1-215ENST00000461974 VEGFBP49765 207 aa6.78□□□□□ -1.32
FN1-215ENST00000461974 ATP2B2Q01814 1243 aa6.78□□□□□ -1.32
FN1-215ENST00000461974 SFSWAPQ12872 951 aaKnown RBP6.78□□□□□ -1.32
FN1-215ENST00000461974 ABHD17AQ96GS6 310 aa6.78□□□□□ -1.32
FN1-215ENST00000461974 NIF3L1Q9GZT8 377 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms