RNA–Protein interactions for RNA: ENST00000461558.2

CFHR3-204, Transcript of complement factor H related 3, humanhuman

TSL 2

Gene CFHR3, Length 785 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-204ENST00000461558 NID1P14543 1247 aa9.69□□□□□ -0.86
CFHR3-204ENST00000461558 FLIIQ13045 1269 aa9.69□□□□□ -0.86
CFHR3-204ENST00000461558 MKRN1Q9UHC7 482 aaKnown RBP9.69□□□□□ -0.86
CFHR3-204ENST00000461558 C9orf172C9J069 976 aa9.68□□□□□ -0.86
CFHR3-204ENST00000461558 PPP1R12BO60237 982 aaPredicted RBP9.68□□□□□ -0.86
CFHR3-204ENST00000461558 C20orf204Q6ZNR8 217 aa9.68□□□□□ -0.86
CFHR3-204ENST00000461558 ZNF594Q96JF6 807 aaPredicted RBP9.68□□□□□ -0.86
CFHR3-204ENST00000461558 C21orf2O43822 256 aa9.67□□□□□ -0.86
CFHR3-204ENST00000461558 H2AFB1P0C5Y9 115 aa9.67□□□□□ -0.86
CFHR3-204ENST00000461558 H2AFB2P0C5Z0 115 aa9.67□□□□□ -0.86
CFHR3-204ENST00000461558 KRTAP9-9Q9BYP9 154 aa9.67□□□□□ -0.86
CFHR3-204ENST00000461558 KRTAP9-4Q9BYQ2 154 aa9.67□□□□□ -0.86
CFHR3-204ENST00000461558 DKK1O94907 266 aa9.66□□□□□ -0.86
CFHR3-204ENST00000461558 LRP8Q14114 963 aa9.66□□□□□ -0.86
CFHR3-204ENST00000461558 TRAPPC3LQ5T215 181 aa9.66□□□□□ -0.86
CFHR3-204ENST00000461558 ALDH16A1Q8IZ83 802 aa9.66□□□□□ -0.86
CFHR3-204ENST00000461558 BHMTQ93088 406 aa9.66□□□□□ -0.86
CFHR3-204ENST00000461558 ADGRE1Q14246 886 aa9.65□□□□□ -0.86
CFHR3-204ENST00000461558 STAG2Q8N3U4 1231 aa9.65□□□□□ -0.86
CFHR3-204ENST00000461558 RBM19Q9Y4C8 960 aaKnown RBP9.65□□□□□ -0.86
CFHR3-204ENST00000461558 MBTPS1Q14703 1052 aa9.64□□□□□ -0.87
CFHR3-204ENST00000461558 BTLAQ7Z6A9 289 aa9.64□□□□□ -0.87
CFHR3-204ENST00000461558 C2orf49Q9BVC5 232 aaPredicted RBP9.64□□□□□ -0.87
CFHR3-204ENST00000461558 LILRB5O75023 590 aa9.63□□□□□ -0.87
CFHR3-204ENST00000461558 ELNP15502 786 aa9.63□□□□□ -0.87
CFHR3-204ENST00000461558 HIF1AQ16665 826 aa9.63□□□□□ -0.87
CFHR3-204ENST00000461558 ATAD2Q6PL18 1390 aa9.63□□□□□ -0.87
CFHR3-204ENST00000461558 PRKCSHP14314 528 aaPredicted RBP9.62□□□□□ -0.87
CFHR3-204ENST00000461558 TBC1D8BQ0IIM8 1120 aa9.62□□□□□ -0.87
CFHR3-204ENST00000461558 TXNRD3Q86VQ6 643 aa9.62□□□□□ -0.87
CFHR3-204ENST00000461558 SCG3Q8WXD2 468 aaKnown RBP9.62□□□□□ -0.87
CFHR3-204ENST00000461558 UBE2OQ9C0C9 1292 aaKnown RBP9.62□□□□□ -0.87
CFHR3-204ENST00000461558 SLC6A14Q9UN76 642 aa9.62□□□□□ -0.87
CFHR3-204ENST00000461558 A0A0A0MRY4 1105 aa9.61□□□□□ -0.87
CFHR3-204ENST00000461558 SELPP16109 830 aa9.61□□□□□ -0.87
CFHR3-204ENST00000461558 RASA1P20936 1047 aa9.61□□□□□ -0.87
CFHR3-204ENST00000461558 NRG1Q02297 640 aaPredicted RBP9.61□□□□□ -0.87
CFHR3-204ENST00000461558 GAS2L2Q8NHY3 880 aa9.61□□□□□ -0.87
CFHR3-204ENST00000461558 NGLY1Q96IV0 654 aa9.61□□□□□ -0.87
CFHR3-204ENST00000461558 SEC13P55735 322 aa9.6□□□□□ -0.87
CFHR3-204ENST00000461558 RAC1P63000 192 aa9.6□□□□□ -0.87
CFHR3-204ENST00000461558 CHMP7Q8WUX9 453 aaPredicted RBP9.6□□□□□ -0.87
CFHR3-204ENST00000461558 EFCC1Q9HA90 598 aa9.6□□□□□ -0.87
CFHR3-204ENST00000461558 IER5Q5VY09 327 aa9.59□□□□□ -0.87
CFHR3-204ENST00000461558 LENG1Q96BZ8 264 aaPredicted RBP9.59□□□□□ -0.87
CFHR3-204ENST00000461558 IGFLR1Q9H665 355 aa9.59□□□□□ -0.87
CFHR3-204ENST00000461558 JPH1Q9HDC5 661 aaPredicted RBP9.59□□□□□ -0.87
CFHR3-204ENST00000461558 MAFBQ9Y5Q3 323 aaPredicted RBP9.59□□□□□ -0.87
CFHR3-204ENST00000461558 HYAL3O43820 417 aaPredicted RBP9.58□□□□□ -0.88
CFHR3-204ENST00000461558 KRTAP19-1Q8IUB9 90 aa9.58□□□□□ -0.88
CFHR3-204ENST00000461558 GLMNQ92990 594 aa9.58□□□□□ -0.88
CFHR3-204ENST00000461558 TP53INP1Q96A56 240 aa9.58□□□□□ -0.88
CFHR3-204ENST00000461558 DNAJB12Q9NXW2 375 aaKnown RBP9.58□□□□□ -0.88
CFHR3-204ENST00000461558 TFIP11Q9UBB9 837 aaKnown RBP9.58□□□□□ -0.88
CFHR3-204ENST00000461558 RTN1Q16799 776 aa9.57□□□□□ -0.88
CFHR3-204ENST00000461558 NUDT8Q8WV74 236 aa9.57□□□□□ -0.88
CFHR3-204ENST00000461558 GSX2Q9BZM3 304 aa9.57□□□□□ -0.88
CFHR3-204ENST00000461558 NAGPAQ9UK23 515 aa9.57□□□□□ -0.88
CFHR3-204ENST00000461558 TGFBR3LH3BV60 316 aa9.56□□□□□ -0.88
CFHR3-204ENST00000461558 PSAPL1Q6NUJ1 521 aa9.56□□□□□ -0.88
CFHR3-204ENST00000461558 SHISA2Q6UWI4 295 aa9.56□□□□□ -0.88
CFHR3-204ENST00000461558 PNMA5Q96PV4 448 aa9.56□□□□□ -0.88
CFHR3-204ENST00000461558 USP21Q9UK80 565 aa9.56□□□□□ -0.88
CFHR3-204ENST00000461558 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.56□□□□□ -0.88
CFHR3-204ENST00000461558 NFKB1P19838 968 aa9.55□□□□□ -0.88
CFHR3-204ENST00000461558 AFF1P51825 1210 aaKnown RBP9.55□□□□□ -0.88
CFHR3-204ENST00000461558 CCINQ13939 588 aa9.55□□□□□ -0.88
CFHR3-204ENST00000461558 DMGDHQ9UI17 866 aaKnown RBP9.55□□□□□ -0.88
CFHR3-204ENST00000461558 BCS1LQ9Y276 419 aa9.55□□□□□ -0.88
CFHR3-204ENST00000461558 KRTAP4-8A0A0G2JLE6 195 aa9.54□□□□□ -0.88
CFHR3-204ENST00000461558 LARP1Q6PKG0 1096 aaKnown RBP9.54□□□□□ -0.88
CFHR3-204ENST00000461558 FNBP4Q8N3X1 1017 aaPredicted RBP9.54□□□□□ -0.88
CFHR3-204ENST00000461558 HINFPQ9BQA5 517 aa9.54□□□□□ -0.88
CFHR3-204ENST00000461558 BTBD11A6QL63 1104 aa9.53□□□□□ -0.88
CFHR3-204ENST00000461558 IGFBP4P22692 258 aa9.53□□□□□ -0.88
CFHR3-204ENST00000461558 CRTC2Q53ET0 693 aaPredicted RBP9.53□□□□□ -0.88
CFHR3-204ENST00000461558 PROSER2Q86WR7 435 aaPredicted RBP9.53□□□□□ -0.88
CFHR3-204ENST00000461558 CLUAP1Q96AJ1 413 aa9.53□□□□□ -0.88
CFHR3-204ENST00000461558 LGR5O75473 907 aa9.52□□□□□ -0.89
CFHR3-204ENST00000461558 RGS9O75916 674 aaPredicted RBP9.52□□□□□ -0.89
CFHR3-204ENST00000461558 EPB42P16452 691 aa9.52□□□□□ -0.89
CFHR3-204ENST00000461558 GRNP28799 593 aaKnown RBP9.52□□□□□ -0.89
CFHR3-204ENST00000461558 DPYDQ12882 1025 aa9.52□□□□□ -0.89
CFHR3-204ENST00000461558 PTK7Q13308 1070 aa9.52□□□□□ -0.89
CFHR3-204ENST00000461558 FMR1NBQ8N0W7 255 aaPredicted RBP9.52□□□□□ -0.89
CFHR3-204ENST00000461558 ILDR2Q71H61 639 aa9.51□□□□□ -0.89
CFHR3-204ENST00000461558 DMRTC2Q8IXT2 367 aaPredicted RBP9.51□□□□□ -0.89
CFHR3-204ENST00000461558 SSBP4Q9BWG4 385 aaPredicted RBP9.51□□□□□ -0.89
CFHR3-204ENST00000461558 KANK4Q5T7N3 995 aaPredicted RBP9.5□□□□□ -0.89
CFHR3-204ENST00000461558 FAM35AQ86V20 835 aa9.5□□□□□ -0.89
CFHR3-204ENST00000461558 MAP3K6O95382 1288 aa9.49□□□□□ -0.89
CFHR3-204ENST00000461558 INPP5BP32019 993 aa9.49□□□□□ -0.89
CFHR3-204ENST00000461558 IDH3AP50213 366 aa9.49□□□□□ -0.89
CFHR3-204ENST00000461558 ANKMY2Q8IV38 441 aa9.49□□□□□ -0.89
CFHR3-204ENST00000461558 PPP1R12CQ9BZL4 782 aa9.49□□□□□ -0.89
CFHR3-204ENST00000461558 GOLGA2P5Q9HBQ8 144 aa9.49□□□□□ -0.89
CFHR3-204ENST00000461558 KLK14Q9P0G3 267 aa9.49□□□□□ -0.89
CFHR3-204ENST00000461558 FAM196BA6NMK8 535 aa9.48□□□□□ -0.89
CFHR3-204ENST00000461558 USP17L15C9J2P7 530 aa9.48□□□□□ -0.89
CFHR3-204ENST00000461558 USP17L10C9JJH3 530 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms