RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 SETD1AO15047 1707 aaKnown RBP11.55□□□□□ -0.56
ECHDC1-212ENST00000461239 PIK3C2GO75747 1445 aa11.55□□□□□ -0.56
ECHDC1-212ENST00000461239 ERVH48-1M5A8F1 160 aa11.55□□□□□ -0.56
ECHDC1-212ENST00000461239 PSME1Q06323 249 aa11.55□□□□□ -0.56
ECHDC1-212ENST00000461239 CDK15Q96Q40 435 aa11.55□□□□□ -0.56
ECHDC1-212ENST00000461239 ALKQ9UM73 1620 aa11.55□□□□□ -0.56
ECHDC1-212ENST00000461239 LRRC7Q96NW7 1537 aa11.55□□□□□ -0.56
ECHDC1-212ENST00000461239 DIP2AQ14689 1571 aa11.54□□□□□ -0.56
ECHDC1-212ENST00000461239 NWD1Q149M9 1564 aa11.54□□□□□ -0.56
ECHDC1-212ENST00000461239 EHBP1Q8NDI1 1231 aa11.54□□□□□ -0.56
ECHDC1-212ENST00000461239 DCAF11Q8TEB1 546 aa11.54□□□□□ -0.56
ECHDC1-212ENST00000461239 MYOM2P54296 1465 aa11.54□□□□□ -0.56
ECHDC1-212ENST00000461239 CHD2O14647 1828 aaKnown RBP11.53□□□□□ -0.56
ECHDC1-212ENST00000461239 PRMT3O60678 531 aa11.53□□□□□ -0.56
ECHDC1-212ENST00000461239 SCNN1AP37088 669 aa11.53□□□□□ -0.56
ECHDC1-212ENST00000461239 NEUROD1Q13562 356 aa11.53□□□□□ -0.56
ECHDC1-212ENST00000461239 EMID1Q96A84 441 aaPredicted RBP11.53□□□□□ -0.56
ECHDC1-212ENST00000461239 CXXC1Q9P0U4 656 aaPredicted RBP11.53□□□□□ -0.56
ECHDC1-212ENST00000461239 RBM19Q9Y4C8 960 aaKnown RBP11.53□□□□□ -0.56
ECHDC1-212ENST00000461239 CPS1P31327 1500 aa11.53□□□□□ -0.56
ECHDC1-212ENST00000461239 PIK3R4Q99570 1358 aa11.53□□□□□ -0.56
ECHDC1-212ENST00000461239 ASXL1Q8IXJ9 1541 aa11.52□□□□□ -0.57
ECHDC1-212ENST00000461239 MYCP01106 439 aaPredicted RBP11.52□□□□□ -0.57
ECHDC1-212ENST00000461239 ERVK-9P63128 1117 aa11.52□□□□□ -0.57
ECHDC1-212ENST00000461239 RC3H1Q5TC82 1133 aaKnown RBP11.52□□□□□ -0.57
ECHDC1-212ENST00000461239 FOXD4L5Q5VV16 416 aaPredicted RBP11.52□□□□□ -0.57
ECHDC1-212ENST00000461239 FOXD4L4Q8WXT5 416 aaPredicted RBP11.52□□□□□ -0.57
ECHDC1-212ENST00000461239 L3MBTL2Q969R5 705 aa11.52□□□□□ -0.57
ECHDC1-212ENST00000461239 C14orf93Q9H972 538 aaKnown RBP11.52□□□□□ -0.57
ECHDC1-212ENST00000461239 AMOTL2Q9Y2J4 779 aa11.52□□□□□ -0.57
ECHDC1-212ENST00000461239 M0R2N6 131 aa11.51□□□□□ -0.57
ECHDC1-212ENST00000461239 GRM5P41594 1212 aa11.51□□□□□ -0.57
ECHDC1-212ENST00000461239 SERPINB4P48594 390 aa11.51□□□□□ -0.57
ECHDC1-212ENST00000461239 LIAT1Q6ZQX7 453 aa11.51□□□□□ -0.57
ECHDC1-212ENST00000461239 PRIMPOLQ96LW4 560 aa11.51□□□□□ -0.57
ECHDC1-212ENST00000461239 XIRP1Q702N8 1843 aaKnown RBP11.51□□□□□ -0.57
ECHDC1-212ENST00000461239 XRN1Q8IZH2 1706 aaKnown RBP11.5□□□□□ -0.57
ECHDC1-212ENST00000461239 FSHRP23945 695 aa11.5□□□□□ -0.57
ECHDC1-212ENST00000461239 TMEM132EQ6IEE7 984 aa11.5□□□□□ -0.57
ECHDC1-212ENST00000461239 TAS1R3Q7RTX0 852 aa11.5□□□□□ -0.57
ECHDC1-212ENST00000461239 MPNDQ8N594 471 aa11.5□□□□□ -0.57
ECHDC1-212ENST00000461239 TLL2Q9Y6L7 1015 aa11.5□□□□□ -0.57
ECHDC1-212ENST00000461239 TMEM94Q12767 1356 aa11.5□□□□□ -0.57
ECHDC1-212ENST00000461239 SIAH2O43255 324 aa11.49□□□□□ -0.57
ECHDC1-212ENST00000461239 CD2BP2O95400 341 aaKnown RBP11.49□□□□□ -0.57
ECHDC1-212ENST00000461239 ARID5BQ14865 1188 aa11.49□□□□□ -0.57
ECHDC1-212ENST00000461239 CC2D2BQ6DHV5 1058 aa11.49□□□□□ -0.57
ECHDC1-212ENST00000461239 TSEN2Q8NCE0 465 aaKnown RBP11.49□□□□□ -0.57
ECHDC1-212ENST00000461239 OSBPL3Q9H4L5 887 aa11.49□□□□□ -0.57
ECHDC1-212ENST00000461239 NKTRP30414 1462 aaKnown RBP11.49□□□□□ -0.57
ECHDC1-212ENST00000461239 IQSEC2Q5JU85 1478 aa11.49□□□□□ -0.57
ECHDC1-212ENST00000461239 SOWAHDA6NJG2 315 aa11.48□□□□□ -0.57
ECHDC1-212ENST00000461239 TMEM229AB2RXF0 380 aa11.48□□□□□ -0.57
ECHDC1-212ENST00000461239 LGR5O75473 907 aa11.48□□□□□ -0.57
ECHDC1-212ENST00000461239 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.48□□□□□ -0.57
ECHDC1-212ENST00000461239 TMPRSS4Q9NRS4 437 aa11.48□□□□□ -0.57
ECHDC1-212ENST00000461239 ZNF358Q9NW07 568 aa11.48□□□□□ -0.57
ECHDC1-212ENST00000461239 ROBO2Q9HCK4 1378 aa11.48□□□□□ -0.57
ECHDC1-212ENST00000461239 ADGRB1O14514 1584 aa11.47□□□□□ -0.57
ECHDC1-212ENST00000461239 PRAG1Q86YV5 1406 aa11.47□□□□□ -0.57
ECHDC1-212ENST00000461239 LRPPRCP42704 1394 aaKnown RBP11.46□□□□□ -0.57
ECHDC1-212ENST00000461239 WEE1P30291 646 aa11.46□□□□□ -0.57
ECHDC1-212ENST00000461239 SCNN1DP51172 638 aa11.46□□□□□ -0.57
ECHDC1-212ENST00000461239 NBPF8Q3BBV2 869 aa11.46□□□□□ -0.57
ECHDC1-212ENST00000461239 HINFPQ9BQA5 517 aa11.46□□□□□ -0.57
ECHDC1-212ENST00000461239 CYLDQ9NQC7 956 aa11.46□□□□□ -0.57
ECHDC1-212ENST00000461239 TECPR2O15040 1411 aa11.45□□□□□ -0.58
ECHDC1-212ENST00000461239 YTHDC2Q9H6S0 1430 aaKnown RBP11.45□□□□□ -0.58
ECHDC1-212ENST00000461239 ABCC11Q96J66 1382 aa11.45□□□□□ -0.58
ECHDC1-212ENST00000461239 DHX9Q08211 1270 aaKnown RBP11.45□□□□□ -0.58
ECHDC1-212ENST00000461239 NBPF1Q3BBV0 1214 aa11.45□□□□□ -0.58
ECHDC1-212ENST00000461239 ZNF784Q8NCA9 323 aaPredicted RBP11.45□□□□□ -0.58
ECHDC1-212ENST00000461239 FBXO41Q8TF61 875 aa11.45□□□□□ -0.58
ECHDC1-212ENST00000461239 PTCH1Q13635 1447 aa11.44□□□□□ -0.58
ECHDC1-212ENST00000461239 PLEKHH1Q9ULM0 1364 aa11.44□□□□□ -0.58
ECHDC1-212ENST00000461239 WASLO00401 505 aaPredicted RBP11.44□□□□□ -0.58
ECHDC1-212ENST00000461239 LILRA1O75019 489 aa11.44□□□□□ -0.58
ECHDC1-212ENST00000461239 RGS20O76081 388 aa11.44□□□□□ -0.58
ECHDC1-212ENST00000461239 STAU1O95793 577 aaKnown RBP11.44□□□□□ -0.58
ECHDC1-212ENST00000461239 ADH1CP00326 375 aa11.44□□□□□ -0.58
ECHDC1-212ENST00000461239 STK26Q9P289 416 aa11.44□□□□□ -0.58
ECHDC1-212ENST00000461239 NCOA3Q9Y6Q9 1424 aa11.43□□□□□ -0.58
ECHDC1-212ENST00000461239 CLSPNQ9HAW4 1339 aa11.43□□□□□ -0.58
ECHDC1-212ENST00000461239 WNT7AO00755 349 aa11.43□□□□□ -0.58
ECHDC1-212ENST00000461239 WAPLQ7Z5K2 1190 aa11.43□□□□□ -0.58
ECHDC1-212ENST00000461239 LAMC1P11047 1609 aa11.42□□□□□ -0.58
ECHDC1-212ENST00000461239 UBAP1LF5GYI3 381 aa11.42□□□□□ -0.58
ECHDC1-212ENST00000461239 FKBP5Q13451 457 aaPredicted RBP11.42□□□□□ -0.58
ECHDC1-212ENST00000461239 CCDC116Q8IYX3 515 aa11.42□□□□□ -0.58
ECHDC1-212ENST00000461239 ZNF428Q96B54 188 aa11.42□□□□□ -0.58
ECHDC1-212ENST00000461239 EGFL7Q9UHF1 273 aa11.42□□□□□ -0.58
ECHDC1-212ENST00000461239 NR3C2P08235 984 aa11.41□□□□□ -0.58
ECHDC1-212ENST00000461239 GDF10P55107 478 aa11.41□□□□□ -0.58
ECHDC1-212ENST00000461239 NR5A1Q13285 461 aa11.41□□□□□ -0.58
ECHDC1-212ENST00000461239 PPP1R26Q5T8A7 1209 aaPredicted RBP11.41□□□□□ -0.58
ECHDC1-212ENST00000461239 MRGPRX2Q96LB1 330 aa11.41□□□□□ -0.58
ECHDC1-212ENST00000461239 PURBQ96QR8 312 aaKnown RBP11.41□□□□□ -0.58
ECHDC1-212ENST00000461239 TONSLQ96HA7 1378 aa11.41□□□□□ -0.58
ECHDC1-212ENST00000461239 KNDC1Q76NI1 1749 aa11.4□□□□□ -0.58
ECHDC1-212ENST00000461239 EPHA4P54764 986 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms