RNA–Protein interactions for RNA: ENST00000460945.5

APTX-210, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 542 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-210ENST00000460945 KDM2BQ8NHM5 1336 aa21.46■■□□□ 1.03
APTX-210ENST00000460945 TCIRG1Q13488 830 aa21.45■■□□□ 1.02
APTX-210ENST00000460945 UTP14AQ9BVJ6 771 aaKnown RBP21.45■■□□□ 1.02
APTX-210ENST00000460945 RRAGCQ9HB90 399 aa21.45■■□□□ 1.02
APTX-210ENST00000460945 ZC3H4Q9UPT8 1303 aaKnown RBP21.45■■□□□ 1.02
APTX-210ENST00000460945 RIC1Q4ADV7 1423 aa21.45■■□□□ 1.02
APTX-210ENST00000460945 ALDH1B1P30837 517 aa21.44■■□□□ 1.02
APTX-210ENST00000460945 CCDC93Q567U6 631 aa21.44■■□□□ 1.02
APTX-210ENST00000460945 HSP90AB3PQ58FF7 597 aa21.44■■□□□ 1.02
APTX-210ENST00000460945 SOGA3Q5TF21 947 aa21.44■■□□□ 1.02
APTX-210ENST00000460945 NLRP10Q86W26 655 aa21.44■■□□□ 1.02
APTX-210ENST00000460945 SYNE4Q8N205 404 aa21.44■■□□□ 1.02
APTX-210ENST00000460945 LTBP3Q9NS15 1303 aa21.44■■□□□ 1.02
APTX-210ENST00000460945 TAF1P21675 1872 aa21.43■■□□□ 1.02
APTX-210ENST00000460945 ANKRD13DQ6ZTN6 518 aa21.43■■□□□ 1.02
APTX-210ENST00000460945 WWC1Q8IX03 1113 aa21.43■■□□□ 1.02
APTX-210ENST00000460945 PLBD2Q8NHP8 589 aa21.43■■□□□ 1.02
APTX-210ENST00000460945 TSR2Q969E8 191 aaKnown RBP21.43■■□□□ 1.02
APTX-210ENST00000460945 CEP350Q5VT06 3117 aa21.43■■□□□ 1.02
APTX-210ENST00000460945 GLTPD2A6NH11 291 aa21.42■■□□□ 1.02
APTX-210ENST00000460945 CCDC27Q2M243 656 aa21.42■■□□□ 1.02
APTX-210ENST00000460945 TSPYL6Q8N831 410 aa21.42■■□□□ 1.02
APTX-210ENST00000460945 RPGRQ92834 1020 aaKnown RBP21.42■■□□□ 1.02
APTX-210ENST00000460945 HYPKQ9NX55 129 aa21.42■■□□□ 1.02
APTX-210ENST00000460945 SALL2Q9Y467 1007 aaPredicted RBP21.42■■□□□ 1.02
APTX-210ENST00000460945 DDX60Q8IY21 1712 aaKnown RBP21.41■■□□□ 1.02
APTX-210ENST00000460945 TOMM70O94826 608 aa21.41■■□□□ 1.02
APTX-210ENST00000460945 HOXA10P31260 410 aaPredicted RBP21.41■■□□□ 1.02
APTX-210ENST00000460945 SLC10A5Q5PT55 438 aa21.41■■□□□ 1.02
APTX-210ENST00000460945 SLC51AQ86UW1 340 aa21.41■■□□□ 1.02
APTX-210ENST00000460945 PHAXQ9H814 394 aaKnown RBP21.41■■□□□ 1.02
APTX-210ENST00000460945 ATP5J2-PTCD1G3V325 749 aa21.4■■□□□ 1.02
APTX-210ENST00000460945 NLRP3Q96P20 1036 aa21.4■■□□□ 1.02
APTX-210ENST00000460945 HCLS1P14317 486 aaPredicted RBP21.39■■□□□ 1.01
APTX-210ENST00000460945 FKBP4Q02790 459 aaKnown RBP eCLIP21.39■■□□□ 1.01
APTX-210ENST00000460945 RBM17Q96I25 401 aaKnown RBP21.39■■□□□ 1.01
APTX-210ENST00000460945 ISCA1Q9BUE6 129 aa21.39■■□□□ 1.01
APTX-210ENST00000460945 ZNF277Q9NRM2 450 aaPredicted RBP21.39■■□□□ 1.01
APTX-210ENST00000460945 TRMT112Q9UI30 125 aaKnown RBP21.39■■□□□ 1.01
APTX-210ENST00000460945 WDR90Q96KV7 1748 aa21.38■■□□□ 1.01
APTX-210ENST00000460945 TCERG1O14776 1098 aaKnown RBP21.38■■□□□ 1.01
APTX-210ENST00000460945 RTKN2Q8IZC4 609 aa21.38■■□□□ 1.01
APTX-210ENST00000460945 CRAMP1Q96RY5 1269 aa21.38■■□□□ 1.01
APTX-210ENST00000460945 SNED1Q8TER0 1413 aa21.38■■□□□ 1.01
APTX-210ENST00000460945 HSPA6P17066 643 aa21.37■■□□□ 1.01
APTX-210ENST00000460945 C16orf71Q8IYS4 520 aaPredicted RBP21.37■■□□□ 1.01
APTX-210ENST00000460945 FAM9BQ8IZU0 186 aa21.37■■□□□ 1.01
APTX-210ENST00000460945 RNF123Q5XPI4 1314 aa21.36■■□□□ 1.01
APTX-210ENST00000460945 SH3TC1Q8TE82 1336 aa21.35■■□□□ 1.01
APTX-210ENST00000460945 POTECB2RU33 542 aa21.35■■□□□ 1.01
APTX-210ENST00000460945 PPEF1O14829 653 aaPredicted RBP21.35■■□□□ 1.01
APTX-210ENST00000460945 CCDC30Q5VVM6 783 aa21.35■■□□□ 1.01
APTX-210ENST00000460945 DPY19L2Q6NUT2 758 aa21.35■■□□□ 1.01
APTX-210ENST00000460945 RIC3Q7Z5B4 369 aa21.35■■□□□ 1.01
APTX-210ENST00000460945 RBM46Q8TBY0 533 aaKnown RBP21.35■■□□□ 1.01
APTX-210ENST00000460945 ABCC4O15439 1325 aa21.34■■□□□ 1.01
APTX-210ENST00000460945 DDNO94850 711 aaPredicted RBP21.34■■□□□ 1.01
APTX-210ENST00000460945 VEGFAP15692 232 aaPredicted RBP21.34■■□□□ 1.01
APTX-210ENST00000460945 GOLGA2Q08379 1002 aa21.34■■□□□ 1.01
APTX-210ENST00000460945 NCBP3Q53F19 620 aaKnown RBP21.34■■□□□ 1.01
APTX-210ENST00000460945 FAM89AQ96GI7 184 aa21.34■■□□□ 1.01
APTX-210ENST00000460945 IL16Q14005 1332 aa21.33■■□□□ 1.01
APTX-210ENST00000460945 IARSP41252 1262 aaKnown RBP21.33■■□□□ 1.01
APTX-210ENST00000460945 RTL5Q5HYW3 569 aaPredicted RBP21.33■■□□□ 1.01
APTX-210ENST00000460945 TWISTNBQ3B726 338 aaPredicted RBP21.32■■□□□ 1
APTX-210ENST00000460945 CC2D2BQ6DHV5 1058 aa21.32■■□□□ 1
APTX-210ENST00000460945 PSMD1Q99460 953 aa21.32■■□□□ 1
APTX-210ENST00000460945 MYD88Q99836 296 aa21.32■■□□□ 1
APTX-210ENST00000460945 CACNA1FO60840 1977 aa21.32■■□□□ 1
APTX-210ENST00000460945 COL4A5P29400 1685 aa21.31■■□□□ 1
APTX-210ENST00000460945 TRIM28Q13263 835 aaKnown RBP21.31■■□□□ 1
APTX-210ENST00000460945 ZNF541Q9H0D2 1346 aa21.3■■□□□ 1
APTX-210ENST00000460945 FANCIQ9NVI1 1328 aa21.3■■□□□ 1
APTX-210ENST00000460945 WDR63Q8IWG1 891 aa21.3■■□□□ 1
APTX-210ENST00000460945 ATP6V0A2Q9Y487 856 aa21.3■■□□□ 1
APTX-210ENST00000460945 COL4A1P02462 1669 aa21.3■■□□□ 1
APTX-210ENST00000460945 DDX46Q7L014 1031 aaKnown RBP21.29■■□□□ 1
APTX-210ENST00000460945 G2E3Q7L622 706 aa21.29■■□□□ 1
APTX-210ENST00000460945 SPINK5Q9NQ38 1064 aaPredicted RBP21.29■■□□□ 1
APTX-210ENST00000460945 SCN4AP35499 1836 aa21.29■■□□□ 1
APTX-210ENST00000460945 FSTL1Q12841 308 aa21.28■■□□□ 1
APTX-210ENST00000460945 JARID2Q92833 1246 aaPredicted RBP21.28■■□□□ 1
APTX-210ENST00000460945 CHMP4AQ9BY43 222 aa21.28■■□□□ 1
APTX-210ENST00000460945 MAP3K2Q9Y2U5 619 aa21.28■■□□□ 1
APTX-210ENST00000460945 IRS4O14654 1257 aaPredicted RBP21.27■■□□□ 1
APTX-210ENST00000460945 BBOX1O75936 387 aa21.27■■□□□ 1
APTX-210ENST00000460945 EXOSC9Q06265 439 aaKnown RBP21.27■■□□□ 1
APTX-210ENST00000460945 GRAPQ13588 217 aa21.27■■□□□ 1
APTX-210ENST00000460945 GRAPLQ8TC17 118 aaPredicted RBP21.27■■□□□ 1
APTX-210ENST00000460945 METTL22Q9BUU2 404 aaPredicted RBP21.27■■□□□ 1
APTX-210ENST00000460945 STK31Q9BXU1 1019 aa21.27■■□□□ 1
APTX-210ENST00000460945 FZD9O00144 591 aa21.26■□□□□ 0.99
APTX-210ENST00000460945 DDX58O95786 925 aaKnown RBP21.26■□□□□ 0.99
APTX-210ENST00000460945 SLC4A2P04920 1241 aa21.26■□□□□ 0.99
APTX-210ENST00000460945 SF3B3Q15393 1217 aaKnown RBP21.26■□□□□ 0.99
APTX-210ENST00000460945 GRIPAP1Q4V328 841 aa21.26■□□□□ 0.99
APTX-210ENST00000460945 SMC1BQ8NDV3 1235 aa21.26■□□□□ 0.99
APTX-210ENST00000460945 PI4KAP2A4QPH2 592 aa21.25■□□□□ 0.99
APTX-210ENST00000460945 LRRC37AA6NMS7 1700 aa21.25■□□□□ 0.99
APTX-210ENST00000460945 KSR2Q6VAB6 950 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms