RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 B4GALNT3Q6L9W6 998 aa4.9□□□□□ -1.63
HPS3-203ENST00000460822 ANKMY2Q8IV38 441 aa4.9□□□□□ -1.63
HPS3-203ENST00000460822 PHACTR1Q9C0D0 580 aa4.9□□□□□ -1.63
HPS3-203ENST00000460822 FAM196BA6NMK8 535 aa4.89□□□□□ -1.63
HPS3-203ENST00000460822 E9PSI1 815 aa4.89□□□□□ -1.63
HPS3-203ENST00000460822 PIK3R2O00459 728 aa4.89□□□□□ -1.63
HPS3-203ENST00000460822 C2CD2LO14523 706 aa4.89□□□□□ -1.63
HPS3-203ENST00000460822 VTI1AQ96AJ9 217 aa4.89□□□□□ -1.63
HPS3-203ENST00000460822 NOVA2Q9UNW9 492 aaKnown RBP4.89□□□□□ -1.63
HPS3-203ENST00000460822 GNEQ9Y223 722 aaKnown RBP4.89□□□□□ -1.63
HPS3-203ENST00000460822 NEURL1BA8MQ27 555 aa4.89□□□□□ -1.63
HPS3-203ENST00000460822 FURINP09958 794 aa4.89□□□□□ -1.63
HPS3-203ENST00000460822 ADH6P28332 368 aa4.89□□□□□ -1.63
HPS3-203ENST00000460822 PTK7Q13308 1070 aa4.89□□□□□ -1.63
HPS3-203ENST00000460822 NEUROD1Q13562 356 aa4.89□□□□□ -1.63
HPS3-203ENST00000460822 CRTC2Q53ET0 693 aaPredicted RBP4.89□□□□□ -1.63
HPS3-203ENST00000460822 SLCO4C1Q6ZQN7 724 aa4.89□□□□□ -1.63
HPS3-203ENST00000460822 NGLY1Q96IV0 654 aa4.89□□□□□ -1.63
HPS3-203ENST00000460822 CEP63Q96MT8 703 aa4.89□□□□□ -1.63
HPS3-203ENST00000460822 MKL2Q9ULH7 1088 aa4.89□□□□□ -1.63
HPS3-203ENST00000460822 AMOTL2Q9Y2J4 779 aa4.89□□□□□ -1.63
HPS3-203ENST00000460822 HIRAP54198 1017 aaPredicted RBP4.88□□□□□ -1.63
HPS3-203ENST00000460822 SH3PXD2AQ5TCZ1 1133 aa4.88□□□□□ -1.63
HPS3-203ENST00000460822 FAM200AQ8TCP9 573 aa4.88□□□□□ -1.63
HPS3-203ENST00000460822 AVENQ9NQS1 362 aaPredicted RBP4.88□□□□□ -1.63
HPS3-203ENST00000460822 ALAS2P22557 587 aa4.87□□□□□ -1.63
HPS3-203ENST00000460822 ALDH16A1Q8IZ83 802 aa4.87□□□□□ -1.63
HPS3-203ENST00000460822 STAG2Q8N3U4 1231 aa4.87□□□□□ -1.63
HPS3-203ENST00000460822 CCER1Q8TC90 406 aaPredicted RBP4.87□□□□□ -1.63
HPS3-203ENST00000460822 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.87□□□□□ -1.63
HPS3-203ENST00000460822 BTBD11A6QL63 1104 aa4.87□□□□□ -1.63
HPS3-203ENST00000460822 SHISA8B8ZZ34 492 aa4.87□□□□□ -1.63
HPS3-203ENST00000460822 DKK1O94907 266 aa4.87□□□□□ -1.63
HPS3-203ENST00000460822 IGFBP4P22692 258 aa4.87□□□□□ -1.63
HPS3-203ENST00000460822 PHLDB3Q6NSJ2 640 aa4.87□□□□□ -1.63
HPS3-203ENST00000460822 EFSO43281 561 aa4.86□□□□□ -1.63
HPS3-203ENST00000460822 LGR5O75473 907 aa4.86□□□□□ -1.63
HPS3-203ENST00000460822 EPXP11678 715 aa4.86□□□□□ -1.63
HPS3-203ENST00000460822 PCBP4P57723 403 aaKnown RBP4.86□□□□□ -1.63
HPS3-203ENST00000460822 TXNDC2Q86VQ3 553 aa4.86□□□□□ -1.63
HPS3-203ENST00000460822 HSH2DQ96JZ2 352 aa4.86□□□□□ -1.63
HPS3-203ENST00000460822 BTBD6Q96KE9 485 aa4.86□□□□□ -1.63
HPS3-203ENST00000460822 SUSD3Q96L08 255 aa4.86□□□□□ -1.63
HPS3-203ENST00000460822 KRTAP4-12Q9BQ66 201 aa4.86□□□□□ -1.63
HPS3-203ENST00000460822 C2orf49Q9BVC5 232 aaPredicted RBP4.86□□□□□ -1.63
HPS3-203ENST00000460822 BRD7Q9NPI1 651 aa4.86□□□□□ -1.63
HPS3-203ENST00000460822 C21orf2O43822 256 aa4.85□□□□□ -1.63
HPS3-203ENST00000460822 ZNF468Q5VIY5 522 aaPredicted RBP4.85□□□□□ -1.63
HPS3-203ENST00000460822 C1orf229Q6ZS94 237 aaPredicted RBP4.85□□□□□ -1.63
HPS3-203ENST00000460822 STRN4Q9NRL3 753 aa4.85□□□□□ -1.63
HPS3-203ENST00000460822 KCNH4Q9UQ05 1017 aa4.85□□□□□ -1.63
HPS3-203ENST00000460822 SSFA2P28290 1259 aa4.85□□□□□ -1.63
HPS3-203ENST00000460822 SFSWAPQ12872 951 aaKnown RBP4.85□□□□□ -1.63
HPS3-203ENST00000460822 LCE3BQ5TA77 95 aa4.85□□□□□ -1.63
HPS3-203ENST00000460822 SYT9Q86SS6 491 aa4.85□□□□□ -1.63
HPS3-203ENST00000460822 SLAIN2Q9P270 581 aa4.85□□□□□ -1.63
HPS3-203ENST00000460822 SNRPNP63162 240 aaKnown RBP4.84□□□□□ -1.63
HPS3-203ENST00000460822 FAM69CQ0P6D2 419 aa4.84□□□□□ -1.63
HPS3-203ENST00000460822 RTN1Q16799 776 aa4.84□□□□□ -1.63
HPS3-203ENST00000460822 POTEAQ6S8J7 498 aa4.84□□□□□ -1.63
HPS3-203ENST00000460822 CHSY3Q70JA7 882 aa4.84□□□□□ -1.63
HPS3-203ENST00000460822 KRTAP9-8Q9BYQ0 159 aa4.84□□□□□ -1.63
HPS3-203ENST00000460822 FOXO3O43524 673 aa4.84□□□□□ -1.64
HPS3-203ENST00000460822 IGSF3O75054 1194 aa4.84□□□□□ -1.64
HPS3-203ENST00000460822 EPB42P16452 691 aa4.84□□□□□ -1.64
HPS3-203ENST00000460822 COL8A1P27658 744 aa4.84□□□□□ -1.64
HPS3-203ENST00000460822 SPEM2Q0P670 501 aa4.84□□□□□ -1.64
HPS3-203ENST00000460822 ZNF280CQ8ND82 737 aa4.84□□□□□ -1.64
HPS3-203ENST00000460822 C7orf43Q8WVR3 580 aa4.84□□□□□ -1.64
HPS3-203ENST00000460822 NOP53Q9NZM5 478 aaKnown RBP4.84□□□□□ -1.64
HPS3-203ENST00000460822 ELOA3CA0A087WX78 387 aaPredicted RBP4.83□□□□□ -1.64
HPS3-203ENST00000460822 ELOA3DA6NLF2 546 aaPredicted RBP4.83□□□□□ -1.64
HPS3-203ENST00000460822 GNB5O14775 395 aa4.83□□□□□ -1.64
HPS3-203ENST00000460822 ARID4AP29374 1257 aaPredicted RBP4.83□□□□□ -1.64
HPS3-203ENST00000460822 SERPINB4P48594 390 aa4.83□□□□□ -1.64
HPS3-203ENST00000460822 GRIN2CQ14957 1233 aa4.83□□□□□ -1.64
HPS3-203ENST00000460822 ELOA3BQ3SY89 546 aa4.83□□□□□ -1.64
HPS3-203ENST00000460822 BTLAQ7Z6A9 289 aa4.83□□□□□ -1.64
HPS3-203ENST00000460822 FCHSD1Q86WN1 690 aa4.83□□□□□ -1.64
HPS3-203ENST00000460822 ELOA3Q8NG57 546 aa4.83□□□□□ -1.64
HPS3-203ENST00000460822 CLP1Q92989 425 aaKnown RBP4.83□□□□□ -1.64
HPS3-203ENST00000460822 PNMA5Q96PV4 448 aa4.83□□□□□ -1.64
HPS3-203ENST00000460822 SIN3BO75182 1162 aa4.82□□□□□ -1.64
HPS3-203ENST00000460822 TYRO3Q06418 890 aa4.82□□□□□ -1.64
HPS3-203ENST00000460822 SLC30A3Q99726 388 aa4.82□□□□□ -1.64
HPS3-203ENST00000460822 KLF15Q9UIH9 416 aa4.82□□□□□ -1.64
HPS3-203ENST00000460822 UNCXA6NJT0 531 aa4.82□□□□□ -1.64
HPS3-203ENST00000460822 TGFBR3LH3BV60 316 aa4.82□□□□□ -1.64
HPS3-203ENST00000460822 ATP2B4P23634 1241 aa4.82□□□□□ -1.64
HPS3-203ENST00000460822 ITGB7P26010 798 aa4.82□□□□□ -1.64
HPS3-203ENST00000460822 SCNN1AP37088 669 aa4.82□□□□□ -1.64
HPS3-203ENST00000460822 KCNQ4P56696 695 aa4.82□□□□□ -1.64
HPS3-203ENST00000460822 TBC1D8BQ0IIM8 1120 aa4.82□□□□□ -1.64
HPS3-203ENST00000460822 IER5Q5VY09 327 aa4.82□□□□□ -1.64
HPS3-203ENST00000460822 BHMTQ93088 406 aa4.82□□□□□ -1.64
HPS3-203ENST00000460822 SPDYE3A6NKU9 549 aa4.81□□□□□ -1.64
HPS3-203ENST00000460822 WEE1P30291 646 aa4.81□□□□□ -1.64
HPS3-203ENST00000460822 DGKZQ13574 1117 aa4.81□□□□□ -1.64
HPS3-203ENST00000460822 SWI5Q1ZZU3 235 aa4.81□□□□□ -1.64
HPS3-203ENST00000460822 RAB44Q7Z6P3 723 aaPredicted RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms