RNA–Protein interactions for RNA: ENST00000460621.6

VAMP7-203, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-203ENST00000460621 PSMD1Q99460 953 aa14.44□□□□□ -0.1
VAMP7-203ENST00000460621 NYXQ9GZU5 481 aa14.44□□□□□ -0.1
VAMP7-203ENST00000460621 TSPYL4Q9UJ04 414 aa14.44□□□□□ -0.1
VAMP7-203ENST00000460621 LTBP1Q14766 1721 aa14.44□□□□□ -0.1
VAMP7-203ENST00000460621 SCN4AP35499 1836 aa14.43□□□□□ -0.1
VAMP7-203ENST00000460621 TCERG1O14776 1098 aaKnown RBP14.43□□□□□ -0.1
VAMP7-203ENST00000460621 EIF2S2P20042 333 aaKnown RBP14.43□□□□□ -0.1
VAMP7-203ENST00000460621 TMPOP42166 694 aaKnown RBP14.43□□□□□ -0.1
VAMP7-203ENST00000460621 FMR1Q06787 632 aaKnown RBP eCLIP14.43□□□□□ -0.1
VAMP7-203ENST00000460621 KIF6Q6ZMV9 814 aa14.43□□□□□ -0.1
VAMP7-203ENST00000460621 HACL1Q9UJ83 578 aa14.43□□□□□ -0.1
VAMP7-203ENST00000460621 RIC1Q4ADV7 1423 aa14.42□□□□□ -0.1
VAMP7-203ENST00000460621 IQCA1LA6NCM1 817 aa14.42□□□□□ -0.1
VAMP7-203ENST00000460621 EPHX2P34913 555 aa14.42□□□□□ -0.1
VAMP7-203ENST00000460621 EAPPQ56P03 285 aaPredicted RBP14.42□□□□□ -0.1
VAMP7-203ENST00000460621 SLC10A5Q5PT55 438 aa14.42□□□□□ -0.1
VAMP7-203ENST00000460621 MAP1SQ66K74 1059 aaPredicted RBP14.42□□□□□ -0.1
VAMP7-203ENST00000460621 NECTIN2Q92692 538 aa14.42□□□□□ -0.1
VAMP7-203ENST00000460621 ZNF428Q96B54 188 aa14.42□□□□□ -0.1
VAMP7-203ENST00000460621 CRAMP1Q96RY5 1269 aa14.42□□□□□ -0.1
VAMP7-203ENST00000460621 IBTKQ9P2D0 1353 aaPredicted RBP14.42□□□□□ -0.1
VAMP7-203ENST00000460621 ERBB4Q15303 1308 aa14.41□□□□□ -0.1
VAMP7-203ENST00000460621 MAPK8IP3Q9UPT6 1336 aa14.41□□□□□ -0.1
VAMP7-203ENST00000460621 CAPN15O75808 1086 aa14.41□□□□□ -0.1
VAMP7-203ENST00000460621 NEFMP07197 916 aa14.41□□□□□ -0.1
VAMP7-203ENST00000460621 CCDC146Q8IYE0 955 aa14.41□□□□□ -0.1
VAMP7-203ENST00000460621 CNTNAP1P78357 1384 aa14.41□□□□□ -0.1
VAMP7-203ENST00000460621 EPS15P42566 896 aa14.4□□□□□ -0.1
VAMP7-203ENST00000460621 VEGFBP49765 207 aa14.4□□□□□ -0.1
VAMP7-203ENST00000460621 SCNN1DP51172 638 aa14.4□□□□□ -0.1
VAMP7-203ENST00000460621 COPS6Q7L5N1 327 aa14.4□□□□□ -0.1
VAMP7-203ENST00000460621 TNS4Q8IZW8 715 aa14.4□□□□□ -0.1
VAMP7-203ENST00000460621 GPC2Q8N158 579 aa14.4□□□□□ -0.1
VAMP7-203ENST00000460621 RPGRQ92834 1020 aaKnown RBP14.4□□□□□ -0.1
VAMP7-203ENST00000460621 TRIM35Q9UPQ4 493 aa14.4□□□□□ -0.1
VAMP7-203ENST00000460621 CHL1O00533 1208 aa14.39□□□□□ -0.11
VAMP7-203ENST00000460621 PPEF1O14829 653 aaPredicted RBP14.39□□□□□ -0.11
VAMP7-203ENST00000460621 FOXN1O15353 648 aa14.39□□□□□ -0.11
VAMP7-203ENST00000460621 CC2D2BQ6DHV5 1058 aa14.39□□□□□ -0.11
VAMP7-203ENST00000460621 CNTROBQ8N137 903 aa14.39□□□□□ -0.11
VAMP7-203ENST00000460621 XAGE3Q8WTP9 111 aa14.39□□□□□ -0.11
VAMP7-203ENST00000460621 RBM17Q96I25 401 aaKnown RBP14.39□□□□□ -0.11
VAMP7-203ENST00000460621 CLEC11AQ9Y240 323 aa14.39□□□□□ -0.11
VAMP7-203ENST00000460621 GJA3Q9Y6H8 435 aa14.39□□□□□ -0.11
VAMP7-203ENST00000460621 TMEM88BA6NKF7 163 aa14.38□□□□□ -0.11
VAMP7-203ENST00000460621 HCLS1P14317 486 aaPredicted RBP14.38□□□□□ -0.11
VAMP7-203ENST00000460621 AIMP1Q12904 312 aaKnown RBP14.38□□□□□ -0.11
VAMP7-203ENST00000460621 DDX10Q13206 875 aaKnown RBP14.38□□□□□ -0.11
VAMP7-203ENST00000460621 RALBP1Q15311 655 aa14.38□□□□□ -0.11
VAMP7-203ENST00000460621 NEUROD2Q15784 382 aa14.38□□□□□ -0.11
VAMP7-203ENST00000460621 NLRP10Q86W26 655 aa14.38□□□□□ -0.11
VAMP7-203ENST00000460621 UTP14AQ9BVJ6 771 aaKnown RBP14.38□□□□□ -0.11
VAMP7-203ENST00000460621 PNNQ9H307 717 aaKnown RBP14.38□□□□□ -0.11
VAMP7-203ENST00000460621 ABCC4O15439 1325 aa14.38□□□□□ -0.11
VAMP7-203ENST00000460621 PARP10Q53GL7 1025 aa14.37□□□□□ -0.11
VAMP7-203ENST00000460621 PPP1R42Q7Z4L9 355 aa14.37□□□□□ -0.11
VAMP7-203ENST00000460621 LARGE2Q8N3Y3 721 aa14.37□□□□□ -0.11
VAMP7-203ENST00000460621 JDP2Q8WYK2 163 aa14.37□□□□□ -0.11
VAMP7-203ENST00000460621 BABAM1Q9NWV8 329 aa14.37□□□□□ -0.11
VAMP7-203ENST00000460621 ATP6V0A2Q9Y487 856 aa14.37□□□□□ -0.11
VAMP7-203ENST00000460621 COL4A1P02462 1669 aa14.36□□□□□ -0.11
VAMP7-203ENST00000460621 TCIRG1Q13488 830 aa14.36□□□□□ -0.11
VAMP7-203ENST00000460621 AOC3Q16853 763 aa14.36□□□□□ -0.11
VAMP7-203ENST00000460621 PNMA8AQ86V59 439 aaPredicted RBP14.36□□□□□ -0.11
VAMP7-203ENST00000460621 NLRP3Q96P20 1036 aa14.36□□□□□ -0.11
VAMP7-203ENST00000460621 TAF1P21675 1872 aa14.35□□□□□ -0.11
VAMP7-203ENST00000460621 LAMB2P55268 1798 aa14.35□□□□□ -0.11
VAMP7-203ENST00000460621 EIF6P56537 245 aaKnown RBP14.35□□□□□ -0.11
VAMP7-203ENST00000460621 CXCL9Q07325 125 aa14.35□□□□□ -0.11
VAMP7-203ENST00000460621 RTFDC1Q9BY42 306 aaPredicted RBP14.35□□□□□ -0.11
VAMP7-203ENST00000460621 DDX21Q9NR30 783 aaKnown RBP eCLIP14.35□□□□□ -0.11
VAMP7-203ENST00000460621 CHPF2Q9P2E5 772 aa14.35□□□□□ -0.11
VAMP7-203ENST00000460621 ADAMTS8Q9UP79 889 aa14.35□□□□□ -0.11
VAMP7-203ENST00000460621 RASSF10A6NK89 507 aa14.34□□□□□ -0.11
VAMP7-203ENST00000460621 TRAF5O00463 557 aa14.34□□□□□ -0.11
VAMP7-203ENST00000460621 PPIP5K2O43314 1243 aa14.34□□□□□ -0.11
VAMP7-203ENST00000460621 CST9Q5W186 159 aa14.34□□□□□ -0.11
VAMP7-203ENST00000460621 WBP1LQ9NX94 342 aa14.34□□□□□ -0.11
VAMP7-203ENST00000460621 SHTN1A0MZ66 631 aa14.33□□□□□ -0.12
VAMP7-203ENST00000460621 SP8Q8IXZ3 490 aa14.33□□□□□ -0.12
VAMP7-203ENST00000460621 LAS1LQ9Y4W2 734 aaKnown RBP14.33□□□□□ -0.12
VAMP7-203ENST00000460621 MYBBP1AQ9BQG0 1328 aaKnown RBP14.33□□□□□ -0.12
VAMP7-203ENST00000460621 YDJCA8MPS7 323 aa14.32□□□□□ -0.12
VAMP7-203ENST00000460621 HIRAP54198 1017 aaPredicted RBP14.32□□□□□ -0.12
VAMP7-203ENST00000460621 DEFB115Q30KQ5 88 aa14.32□□□□□ -0.12
VAMP7-203ENST00000460621 GRIPAP1Q4V328 841 aa14.32□□□□□ -0.12
VAMP7-203ENST00000460621 NIM1KQ8IY84 436 aa14.32□□□□□ -0.12
VAMP7-203ENST00000460621 RUNDC1Q96C34 613 aa14.32□□□□□ -0.12
VAMP7-203ENST00000460621 ISCA1Q9BUE6 129 aa14.32□□□□□ -0.12
VAMP7-203ENST00000460621 GPRC5DQ9NZD1 345 aa14.32□□□□□ -0.12
VAMP7-203ENST00000460621 TRMT112Q9UI30 125 aaKnown RBP14.32□□□□□ -0.12
VAMP7-203ENST00000460621 ANKRD36CQ5JPF3 1778 aa14.32□□□□□ -0.12
VAMP7-203ENST00000460621 DUOX1Q9NRD9 1551 aa14.31□□□□□ -0.12
VAMP7-203ENST00000460621 ATP5J2-PTCD1G3V325 749 aa14.31□□□□□ -0.12
VAMP7-203ENST00000460621 BBOX1O75936 387 aa14.31□□□□□ -0.12
VAMP7-203ENST00000460621 ZNRF3Q9ULT6 936 aa14.31□□□□□ -0.12
VAMP7-203ENST00000460621 GMPSP49915 693 aaPredicted RBP14.3□□□□□ -0.12
VAMP7-203ENST00000460621 LMOD3Q0VAK6 560 aa14.3□□□□□ -0.12
VAMP7-203ENST00000460621 KIAA2012Q0VF49 1180 aa14.3□□□□□ -0.12
VAMP7-203ENST00000460621 GRAPQ13588 217 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms