RNA–Protein interactions for RNA: ENST00000460231.5

PCNP-202, Transcript of PEST proteolytic signal containing nuclear protein, humanhuman

TSL 1 (best)

Gene PCNP, Length 2,165 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNP-202ENST00000460231 C4BP0C0L5 1744 aa17.9■□□□□ 0.46
PCNP-202ENST00000460231 ILDR1Q86SU0 546 aaPredicted RBP17.9■□□□□ 0.46
PCNP-202ENST00000460231 CNTNAP4Q9C0A0 1308 aa17.89■□□□□ 0.45
PCNP-202ENST00000460231 FOXO4P98177 505 aa17.89■□□□□ 0.45
PCNP-202ENST00000460231 NLRP10Q86W26 655 aa17.89■□□□□ 0.45
PCNP-202ENST00000460231 CCDC85AQ96PX6 553 aaPredicted RBP17.89■□□□□ 0.45
PCNP-202ENST00000460231 TSHZ3Q63HK5 1081 aa17.88■□□□□ 0.45
PCNP-202ENST00000460231 ANKRD36CQ5JPF3 1778 aa17.87■□□□□ 0.45
PCNP-202ENST00000460231 CCDC191Q8NCU4 936 aa17.87■□□□□ 0.45
PCNP-202ENST00000460231 GCC1Q96CN9 775 aa17.87■□□□□ 0.45
PCNP-202ENST00000460231 APBA3O96018 575 aa17.87■□□□□ 0.45
PCNP-202ENST00000460231 TXNRD1Q16881 649 aa17.87■□□□□ 0.45
PCNP-202ENST00000460231 SUSD4Q5VX71 490 aa17.87■□□□□ 0.45
PCNP-202ENST00000460231 ZNF34Q8IZ26 560 aa17.87■□□□□ 0.45
PCNP-202ENST00000460231 ARHGEF1Q92888 912 aaKnown RBP17.87■□□□□ 0.45
PCNP-202ENST00000460231 MTX1Q13505 466 aa17.86■□□□□ 0.45
PCNP-202ENST00000460231 USPL1Q5W0Q7 1092 aa17.86■□□□□ 0.45
PCNP-202ENST00000460231 IL1RAPL2Q9NP60 686 aa17.86■□□□□ 0.45
PCNP-202ENST00000460231 RPS6KA4O75676 772 aa17.86■□□□□ 0.45
PCNP-202ENST00000460231 LMBR1LQ6UX01 489 aa17.86■□□□□ 0.45
PCNP-202ENST00000460231 SIL1Q9H173 461 aa17.86■□□□□ 0.45
PCNP-202ENST00000460231 TNS1Q9HBL0 1735 aaKnown RBP17.86■□□□□ 0.45
PCNP-202ENST00000460231 C4AP0C0L4 1744 aa17.85■□□□□ 0.45
PCNP-202ENST00000460231 IBTKQ9P2D0 1353 aaPredicted RBP17.85■□□□□ 0.45
PCNP-202ENST00000460231 ERVV-1B6SEH8 477 aa17.85■□□□□ 0.45
PCNP-202ENST00000460231 SURF6O75683 361 aaKnown RBP17.85■□□□□ 0.45
PCNP-202ENST00000460231 RFX5P48382 616 aaPredicted RBP17.85■□□□□ 0.45
PCNP-202ENST00000460231 ZNF827Q17R98 1081 aa17.85■□□□□ 0.45
PCNP-202ENST00000460231 BICDL1Q6ZP65 573 aa17.85■□□□□ 0.45
PCNP-202ENST00000460231 BCORQ6W2J9 1755 aa17.85■□□□□ 0.45
PCNP-202ENST00000460231 TRIM28Q13263 835 aaKnown RBP17.84■□□□□ 0.45
PCNP-202ENST00000460231 NUTM1Q86Y26 1132 aa17.84■□□□□ 0.45
PCNP-202ENST00000460231 CCDC24Q8N4L8 307 aa17.84■□□□□ 0.45
PCNP-202ENST00000460231 RABL6Q3YEC7 729 aaPredicted RBP17.84■□□□□ 0.45
PCNP-202ENST00000460231 TBC1D9BQ66K14 1250 aa17.84■□□□□ 0.45
PCNP-202ENST00000460231 COL4A1P02462 1669 aa17.84■□□□□ 0.45
PCNP-202ENST00000460231 UBR3Q6ZT12 1888 aa17.83■□□□□ 0.45
PCNP-202ENST00000460231 RC3H1Q5TC82 1133 aaKnown RBP17.83■□□□□ 0.45
PCNP-202ENST00000460231 ZNF594Q96JF6 807 aaPredicted RBP17.83■□□□□ 0.45
PCNP-202ENST00000460231 HMMRO75330 724 aa17.83■□□□□ 0.44
PCNP-202ENST00000460231 NIP7Q9Y221 180 aaKnown RBP eCLIP17.83■□□□□ 0.44
PCNP-202ENST00000460231 HCLS1P14317 486 aaPredicted RBP17.82■□□□□ 0.44
PCNP-202ENST00000460231 C8orf34Q49A92 452 aa17.82■□□□□ 0.44
PCNP-202ENST00000460231 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.81■□□□□ 0.44
PCNP-202ENST00000460231 PTPN12Q05209 780 aaKnown RBP17.81■□□□□ 0.44
PCNP-202ENST00000460231 C3orf67Q6ZVT6 689 aa17.81■□□□□ 0.44
PCNP-202ENST00000460231 NPM2Q86SE8 214 aaKnown RBP17.81■□□□□ 0.44
PCNP-202ENST00000460231 PLEKHM2Q8IWE5 1019 aa17.81■□□□□ 0.44
PCNP-202ENST00000460231 ZBTB38Q8NAP3 1195 aaPredicted RBP17.81■□□□□ 0.44
PCNP-202ENST00000460231 TRMT112Q9UI30 125 aaKnown RBP17.81■□□□□ 0.44
PCNP-202ENST00000460231 RTCBQ9Y3I0 505 aaKnown RBP17.81■□□□□ 0.44
PCNP-202ENST00000460231 SASH1O94885 1247 aa17.81■□□□□ 0.44
PCNP-202ENST00000460231 PCCAP05165 728 aaPredicted RBP17.81■□□□□ 0.44
PCNP-202ENST00000460231 CHMP3Q9Y3E7 222 aa17.81■□□□□ 0.44
PCNP-202ENST00000460231 SCN7AQ01118 1682 aa17.81■□□□□ 0.44
PCNP-202ENST00000460231 FAM161AQ3B820 660 aa17.8■□□□□ 0.44
PCNP-202ENST00000460231 AK7Q96M32 723 aa17.8■□□□□ 0.44
PCNP-202ENST00000460231 SEC24BO95487 1268 aa17.8■□□□□ 0.44
PCNP-202ENST00000460231 NTSR2O95665 410 aa17.8■□□□□ 0.44
PCNP-202ENST00000460231 EN1Q05925 392 aaPredicted RBP17.8■□□□□ 0.44
PCNP-202ENST00000460231 GSPT1P15170 499 aaKnown RBP17.79■□□□□ 0.44
PCNP-202ENST00000460231 EZH2Q15910 746 aaKnown RBP17.79■□□□□ 0.44
PCNP-202ENST00000460231 RHPN1Q8TCX5 695 aa17.79■□□□□ 0.44
PCNP-202ENST00000460231 PUS3Q9BZE2 481 aaKnown RBP17.79■□□□□ 0.44
PCNP-202ENST00000460231 NARFQ9UHQ1 456 aa17.79■□□□□ 0.44
PCNP-202ENST00000460231 SALL3Q9BXA9 1300 aa17.79■□□□□ 0.44
PCNP-202ENST00000460231 DEFB132Q7Z7B7 95 aa17.79■□□□□ 0.44
PCNP-202ENST00000460231 NOP58Q9Y2X3 529 aaKnown RBP17.79■□□□□ 0.44
PCNP-202ENST00000460231 TUBGCP6Q96RT7 1819 aa17.78■□□□□ 0.44
PCNP-202ENST00000460231 IRS4O14654 1257 aaPredicted RBP17.78■□□□□ 0.44
PCNP-202ENST00000460231 PLSCR1O15162 318 aa17.78■□□□□ 0.44
PCNP-202ENST00000460231 LRRC24Q50LG9 513 aa17.78■□□□□ 0.44
PCNP-202ENST00000460231 SLC51AQ86UW1 340 aa17.78■□□□□ 0.44
PCNP-202ENST00000460231 LRRCC1Q9C099 1032 aa17.78■□□□□ 0.44
PCNP-202ENST00000460231 GREM2Q9H772 168 aa17.78■□□□□ 0.44
PCNP-202ENST00000460231 TAF1P21675 1872 aa17.77■□□□□ 0.44
PCNP-202ENST00000460231 USP42Q9H9J4 1324 aaKnown RBP17.77■□□□□ 0.44
PCNP-202ENST00000460231 SLC27A3Q5K4L6 730 aa17.77■□□□□ 0.44
PCNP-202ENST00000460231 ANO8Q9HCE9 1232 aaPredicted RBP17.77■□□□□ 0.44
PCNP-202ENST00000460231 DDX60Q8IY21 1712 aaKnown RBP17.77■□□□□ 0.44
PCNP-202ENST00000460231 HSP90AB3PQ58FF7 597 aa17.77■□□□□ 0.43
PCNP-202ENST00000460231 BACH2Q9BYV9 841 aa17.77■□□□□ 0.43
PCNP-202ENST00000460231 TLR7Q9NYK1 1049 aaKnown RBP17.77■□□□□ 0.43
PCNP-202ENST00000460231 ERFEQ4G0M1 354 aa17.76■□□□□ 0.43
PCNP-202ENST00000460231 TRAPPC3LQ5T215 181 aa17.76■□□□□ 0.43
PCNP-202ENST00000460231 TTLL11Q8NHH1 800 aa17.76■□□□□ 0.43
PCNP-202ENST00000460231 ABCC12Q96J65 1359 aa17.76■□□□□ 0.43
PCNP-202ENST00000460231 PELP1Q8IZL8 1130 aaKnown RBP17.76■□□□□ 0.43
PCNP-202ENST00000460231 RFC4P35249 363 aa17.75■□□□□ 0.43
PCNP-202ENST00000460231 ATG9AQ7Z3C6 839 aa17.75■□□□□ 0.43
PCNP-202ENST00000460231 AKT1S1Q96B36 256 aa17.75■□□□□ 0.43
PCNP-202ENST00000460231 PDGFDQ9GZP0 370 aaPredicted RBP17.75■□□□□ 0.43
PCNP-202ENST00000460231 CSF1RP07333 972 aa17.74■□□□□ 0.43
PCNP-202ENST00000460231 UTP14AQ9BVJ6 771 aaKnown RBP17.74■□□□□ 0.43
PCNP-202ENST00000460231 SEC31BQ9NQW1 1179 aa17.74■□□□□ 0.43
PCNP-202ENST00000460231 RBM19Q9Y4C8 960 aaKnown RBP17.74■□□□□ 0.43
PCNP-202ENST00000460231 ZPR1O75312 459 aa17.74■□□□□ 0.43
PCNP-202ENST00000460231 GYS1P13807 737 aa17.74■□□□□ 0.43
PCNP-202ENST00000460231 CTSWP56202 376 aa17.74■□□□□ 0.43
PCNP-202ENST00000460231 EAF2Q96CJ1 260 aaPredicted RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms