RNA–Protein interactions for RNA: ENST00000460100.1

IMP4-207, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 3

Gene IMP4, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-207ENST00000460100 ADCY9O60503 1353 aa18.56■□□□□ 0.56
IMP4-207ENST00000460100 PI4KAP2A4QPH2 592 aa18.56■□□□□ 0.56
IMP4-207ENST00000460100 DDX58O95786 925 aaKnown RBP18.56■□□□□ 0.56
IMP4-207ENST00000460100 FLIIQ13045 1269 aa18.56■□□□□ 0.56
IMP4-207ENST00000460100 CRY2Q49AN0 593 aa18.56■□□□□ 0.56
IMP4-207ENST00000460100 PELP1Q8IZL8 1130 aaKnown RBP18.56■□□□□ 0.56
IMP4-207ENST00000460100 PI4KAP1Q8N8J0 262 aa18.56■□□□□ 0.56
IMP4-207ENST00000460100 METTL22Q9BUU2 404 aaPredicted RBP18.56■□□□□ 0.56
IMP4-207ENST00000460100 UTP14AQ9BVJ6 771 aaKnown RBP18.56■□□□□ 0.56
IMP4-207ENST00000460100 WWC3Q9ULE0 1092 aa18.56■□□□□ 0.56
IMP4-207ENST00000460100 CHD4Q14839 1912 aa18.55■□□□□ 0.56
IMP4-207ENST00000460100 NPHP1O15259 732 aa18.55■□□□□ 0.56
IMP4-207ENST00000460100 HNRNPUQ00839 825 aaKnown RBP eCLIP18.55■□□□□ 0.56
IMP4-207ENST00000460100 DALRD3Q5D0E6 543 aaKnown RBP18.55■□□□□ 0.56
IMP4-207ENST00000460100 STYK1Q6J9G0 422 aa18.55■□□□□ 0.56
IMP4-207ENST00000460100 ZNF428Q96B54 188 aa18.55■□□□□ 0.56
IMP4-207ENST00000460100 BCS1LQ9Y276 419 aa18.55■□□□□ 0.56
IMP4-207ENST00000460100 ATP5J2-PTCD1G3V325 749 aa18.54■□□□□ 0.56
IMP4-207ENST00000460100 GTF2E1P29083 439 aaPredicted RBP18.54■□□□□ 0.56
IMP4-207ENST00000460100 MASTLQ96GX5 879 aa18.54■□□□□ 0.56
IMP4-207ENST00000460100 MAP3K2Q9Y2U5 619 aa18.54■□□□□ 0.56
IMP4-207ENST00000460100 TTLL6Q8N841 843 aa18.53■□□□□ 0.56
IMP4-207ENST00000460100 CT47B1P0C2W7 299 aaPredicted RBP18.52■□□□□ 0.56
IMP4-207ENST00000460100 CCDC191Q8NCU4 936 aa18.52■□□□□ 0.56
IMP4-207ENST00000460100 MYD88Q99836 296 aa18.52■□□□□ 0.56
IMP4-207ENST00000460100 TRMT112Q9UI30 125 aaKnown RBP18.52■□□□□ 0.56
IMP4-207ENST00000460100 ZBED9Q6R2W3 1325 aa18.51■□□□□ 0.55
IMP4-207ENST00000460100 SH3TC1Q8TE82 1336 aa18.51■□□□□ 0.55
IMP4-207ENST00000460100 IGKV5-2P06315 115 aa18.51■□□□□ 0.55
IMP4-207ENST00000460100 NPR1P16066 1061 aa18.51■□□□□ 0.55
IMP4-207ENST00000460100 HOXA10P31260 410 aaPredicted RBP18.51■□□□□ 0.55
IMP4-207ENST00000460100 C3orf67Q6ZVT6 689 aa18.51■□□□□ 0.55
IMP4-207ENST00000460100 SYNE4Q8N205 404 aa18.51■□□□□ 0.55
IMP4-207ENST00000460100 MRPL50Q8N5N7 158 aaKnown RBP18.51■□□□□ 0.55
IMP4-207ENST00000460100 SLX4Q8IY92 1834 aa18.51■□□□□ 0.55
IMP4-207ENST00000460100 DDX60Q8IY21 1712 aaKnown RBP18.5■□□□□ 0.55
IMP4-207ENST00000460100 FKBP5Q13451 457 aaPredicted RBP18.5■□□□□ 0.55
IMP4-207ENST00000460100 SSH1Q8WYL5 1049 aa18.5■□□□□ 0.55
IMP4-207ENST00000460100 CNKSR1Q969H4 720 aa18.5■□□□□ 0.55
IMP4-207ENST00000460100 ZNF622Q969S3 477 aaKnown RBP eCLIP18.5■□□□□ 0.55
IMP4-207ENST00000460100 ALDH1L2Q3SY69 923 aa18.49■□□□□ 0.55
IMP4-207ENST00000460100 ZBTB38Q8NAP3 1195 aaPredicted RBP18.49■□□□□ 0.55
IMP4-207ENST00000460100 C7orf43Q8WVR3 580 aa18.49■□□□□ 0.55
IMP4-207ENST00000460100 DNAAF4Q8WXU2 420 aa18.49■□□□□ 0.55
IMP4-207ENST00000460100 NLRP3Q96P20 1036 aa18.49■□□□□ 0.55
IMP4-207ENST00000460100 LAMB2P55268 1798 aa18.49■□□□□ 0.55
IMP4-207ENST00000460100 FAM89AQ96GI7 184 aa18.48■□□□□ 0.55
IMP4-207ENST00000460100 CWC25Q9NXE8 425 aaPredicted RBP18.48■□□□□ 0.55
IMP4-207ENST00000460100 NEURL1BA8MQ27 555 aa18.47■□□□□ 0.55
IMP4-207ENST00000460100 PCCAP05165 728 aaPredicted RBP18.47■□□□□ 0.55
IMP4-207ENST00000460100 HCLS1P14317 486 aaPredicted RBP18.47■□□□□ 0.55
IMP4-207ENST00000460100 ALDH1B1P30837 517 aa18.47■□□□□ 0.55
IMP4-207ENST00000460100 BRPF1P55201 1214 aaPredicted RBP18.47■□□□□ 0.55
IMP4-207ENST00000460100 PRPF40BQ6NWY9 871 aaKnown RBP18.47■□□□□ 0.55
IMP4-207ENST00000460100 CACNA1SQ13698 1873 aa18.46■□□□□ 0.55
IMP4-207ENST00000460100 NEXNQ0ZGT2 675 aa18.46■□□□□ 0.55
IMP4-207ENST00000460100 CWF19L2Q2TBE0 894 aaKnown RBP18.46■□□□□ 0.55
IMP4-207ENST00000460100 LINS1Q8NG48 757 aa18.46■□□□□ 0.55
IMP4-207ENST00000460100 CRAMP1Q96RY5 1269 aa18.46■□□□□ 0.55
IMP4-207ENST00000460100 SF3B3Q15393 1217 aaKnown RBP18.45■□□□□ 0.54
IMP4-207ENST00000460100 BEND3Q5T5X7 828 aa18.45■□□□□ 0.54
IMP4-207ENST00000460100 ARHGAP27Q6ZUM4 889 aa18.45■□□□□ 0.54
IMP4-207ENST00000460100 FER1L6Q2WGJ9 1857 aa18.45■□□□□ 0.54
IMP4-207ENST00000460100 SBF1O95248 1867 aa18.44■□□□□ 0.54
IMP4-207ENST00000460100 F6X3S4 739 aa18.44■□□□□ 0.54
IMP4-207ENST00000460100 H7C1W4 665 aa18.44■□□□□ 0.54
IMP4-207ENST00000460100 IRS4O14654 1257 aaPredicted RBP18.44■□□□□ 0.54
IMP4-207ENST00000460100 GCKRQ14397 625 aa18.44■□□□□ 0.54
IMP4-207ENST00000460100 PTPRCP08575 1304 aa18.44■□□□□ 0.54
IMP4-207ENST00000460100 CDHR2Q9BYE9 1310 aa18.44■□□□□ 0.54
IMP4-207ENST00000460100 SNED1Q8TER0 1413 aa18.43■□□□□ 0.54
IMP4-207ENST00000460100 C21orf2O43822 256 aa18.43■□□□□ 0.54
IMP4-207ENST00000460100 YY1P25490 414 aa18.43■□□□□ 0.54
IMP4-207ENST00000460100 RARSP54136 660 aaKnown RBP18.43■□□□□ 0.54
IMP4-207ENST00000460100 RPGRQ92834 1020 aaKnown RBP18.43■□□□□ 0.54
IMP4-207ENST00000460100 RBM17Q96I25 401 aaKnown RBP18.43■□□□□ 0.54
IMP4-207ENST00000460100 NFKBIEO00221 500 aa18.42■□□□□ 0.54
IMP4-207ENST00000460100 CASP7P55210 303 aa18.42■□□□□ 0.54
IMP4-207ENST00000460100 RTL5Q5HYW3 569 aaPredicted RBP18.42■□□□□ 0.54
IMP4-207ENST00000460100 BCL2L13Q9BXK5 485 aa18.42■□□□□ 0.54
IMP4-207ENST00000460100 PRELPP51888 382 aa18.41■□□□□ 0.54
IMP4-207ENST00000460100 SOGA3Q5TF21 947 aa18.41■□□□□ 0.54
IMP4-207ENST00000460100 SMC4Q9NTJ3 1288 aa18.41■□□□□ 0.54
IMP4-207ENST00000460100 ABCC4O15439 1325 aa18.41■□□□□ 0.54
IMP4-207ENST00000460100 LTBP3Q9NS15 1303 aa18.41■□□□□ 0.54
IMP4-207ENST00000460100 HSP90B1P14625 803 aaKnown RBP18.4■□□□□ 0.54
IMP4-207ENST00000460100 JARID2Q92833 1246 aaPredicted RBP18.4■□□□□ 0.54
IMP4-207ENST00000460100 TAF1P21675 1872 aa18.39■□□□□ 0.54
IMP4-207ENST00000460100 PDE8AO60658 829 aa18.39■□□□□ 0.53
IMP4-207ENST00000460100 ALDH1L1O75891 902 aa18.39■□□□□ 0.53
IMP4-207ENST00000460100 PLA2G12BQ9BX93 195 aa18.39■□□□□ 0.53
IMP4-207ENST00000460100 COL4A1P02462 1669 aa18.38■□□□□ 0.53
IMP4-207ENST00000460100 BBOX1O75936 387 aa18.38■□□□□ 0.53
IMP4-207ENST00000460100 RASSF7Q02833 373 aa18.38■□□□□ 0.53
IMP4-207ENST00000460100 CCDC93Q567U6 631 aa18.38■□□□□ 0.53
IMP4-207ENST00000460100 CC2D2BQ6DHV5 1058 aa18.38■□□□□ 0.53
IMP4-207ENST00000460100 OLFM4Q6UX06 510 aa18.38■□□□□ 0.53
IMP4-207ENST00000460100 UBE3BQ7Z3V4 1068 aa18.38■□□□□ 0.53
IMP4-207ENST00000460100 ZNF219Q9P2Y4 722 aaPredicted RBP18.38■□□□□ 0.53
IMP4-207ENST00000460100 MYH3P11055 1940 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms