RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 SMC4Q9NTJ3 1288 aa19.34■□□□□ 0.69
CMTM3-203ENST00000460097 ZPR1O75312 459 aa19.33■□□□□ 0.68
CMTM3-203ENST00000460097 MYL6BP14649 208 aa19.33■□□□□ 0.68
CMTM3-203ENST00000460097 ARXQ96QS3 562 aa19.33■□□□□ 0.68
CMTM3-203ENST00000460097 SPON1Q9HCB6 807 aa19.33■□□□□ 0.68
CMTM3-203ENST00000460097 ATF5Q9Y2D1 282 aaPredicted RBP19.33■□□□□ 0.68
CMTM3-203ENST00000460097 LAMB4A4D0S4 1761 aa19.33■□□□□ 0.68
CMTM3-203ENST00000460097 CASZ1Q86V15 1759 aa19.33■□□□□ 0.68
CMTM3-203ENST00000460097 GOLGA6L22H0YM25 854 aa19.32■□□□□ 0.68
CMTM3-203ENST00000460097 SPRYD3Q8NCJ5 442 aa19.32■□□□□ 0.68
CMTM3-203ENST00000460097 PDIA6Q15084 440 aa19.32■□□□□ 0.68
CMTM3-203ENST00000460097 KLHL40Q2TBA0 621 aa19.32■□□□□ 0.68
CMTM3-203ENST00000460097 NARFQ9UHQ1 456 aa19.32■□□□□ 0.68
CMTM3-203ENST00000460097 SRCAPQ6ZRS2 3230 aa19.31■□□□□ 0.68
CMTM3-203ENST00000460097 ZSCAN30Q86W11 494 aa19.31■□□□□ 0.68
CMTM3-203ENST00000460097 GAS2L3Q86XJ1 694 aa19.31■□□□□ 0.68
CMTM3-203ENST00000460097 SSH1Q8WYL5 1049 aa19.31■□□□□ 0.68
CMTM3-203ENST00000460097 GCC1Q96CN9 775 aa19.31■□□□□ 0.68
CMTM3-203ENST00000460097 DDX21Q9NR30 783 aaKnown RBP eCLIP19.31■□□□□ 0.68
CMTM3-203ENST00000460097 DBF4Q9UBU7 674 aaPredicted RBP19.31■□□□□ 0.68
CMTM3-203ENST00000460097 SRP68Q9UHB9 627 aaKnown RBP19.31■□□□□ 0.68
CMTM3-203ENST00000460097 TBC1D2BQ9UPU7 963 aa19.31■□□□□ 0.68
CMTM3-203ENST00000460097 USP42Q9H9J4 1324 aaKnown RBP19.31■□□□□ 0.68
CMTM3-203ENST00000460097 K7ELQ4 463 aaPredicted RBP19.3■□□□□ 0.68
CMTM3-203ENST00000460097 CCDC30Q5VVM6 783 aa19.3■□□□□ 0.68
CMTM3-203ENST00000460097 USPL1Q5W0Q7 1092 aa19.3■□□□□ 0.68
CMTM3-203ENST00000460097 CHD1LQ86WJ1 897 aa19.3■□□□□ 0.68
CMTM3-203ENST00000460097 DZIP3Q86Y13 1208 aaKnown RBP19.3■□□□□ 0.68
CMTM3-203ENST00000460097 KIF2CQ99661 725 aa19.3■□□□□ 0.68
CMTM3-203ENST00000460097 CHPF2Q9P2E5 772 aa19.3■□□□□ 0.68
CMTM3-203ENST00000460097 VAMP4O75379 141 aa19.29■□□□□ 0.68
CMTM3-203ENST00000460097 OFD1O75665 1012 aa19.29■□□□□ 0.68
CMTM3-203ENST00000460097 GYS1P13807 737 aa19.29■□□□□ 0.68
CMTM3-203ENST00000460097 MSL1Q68DK7 614 aa19.29■□□□□ 0.68
CMTM3-203ENST00000460097 ITPRIPQ8IWB1 547 aa19.29■□□□□ 0.68
CMTM3-203ENST00000460097 NLGN1Q8N2Q7 840 aa19.29■□□□□ 0.68
CMTM3-203ENST00000460097 ZMYND15Q9H091 742 aa19.29■□□□□ 0.68
CMTM3-203ENST00000460097 ANXA1P04083 346 aa19.29■□□□□ 0.68
CMTM3-203ENST00000460097 PROSER3Q2NL68 480 aa19.29■□□□□ 0.68
CMTM3-203ENST00000460097 ZNF445P59923 1031 aa19.28■□□□□ 0.68
CMTM3-203ENST00000460097 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.28■□□□□ 0.68
CMTM3-203ENST00000460097 ANP32BQ92688 251 aaKnown RBP19.28■□□□□ 0.68
CMTM3-203ENST00000460097 LRP10Q7Z4F1 713 aa19.27■□□□□ 0.68
CMTM3-203ENST00000460097 MAP7D2Q96T17 732 aa19.27■□□□□ 0.68
CMTM3-203ENST00000460097 HYPKQ9NX55 129 aa19.27■□□□□ 0.68
CMTM3-203ENST00000460097 POLD1P28340 1107 aa19.27■□□□□ 0.67
CMTM3-203ENST00000460097 ARHGAP45Q92619 1136 aa19.27■□□□□ 0.67
CMTM3-203ENST00000460097 NOB1Q9ULX3 412 aaKnown RBP19.27■□□□□ 0.67
CMTM3-203ENST00000460097 CAMTA2O94983 1202 aa19.26■□□□□ 0.67
CMTM3-203ENST00000460097 PTGER2P43116 358 aa19.26■□□□□ 0.67
CMTM3-203ENST00000460097 TMEM57Q8N5G2 664 aa19.26■□□□□ 0.67
CMTM3-203ENST00000460097 STK31Q9BXU1 1019 aa19.26■□□□□ 0.67
CMTM3-203ENST00000460097 C4AP0C0L4 1744 aa19.26■□□□□ 0.67
CMTM3-203ENST00000460097 NASPP49321 788 aaPredicted RBP19.25■□□□□ 0.67
CMTM3-203ENST00000460097 AIMP1Q12904 312 aaKnown RBP19.25■□□□□ 0.67
CMTM3-203ENST00000460097 KIF6Q6ZMV9 814 aa19.25■□□□□ 0.67
CMTM3-203ENST00000460097 TTLL7Q6ZT98 887 aa19.25■□□□□ 0.67
CMTM3-203ENST00000460097 COPS6Q7L5N1 327 aa19.25■□□□□ 0.67
CMTM3-203ENST00000460097 SGIP1Q9BQI5 828 aa19.25■□□□□ 0.67
CMTM3-203ENST00000460097 BCL2L12Q9HB09 334 aa19.25■□□□□ 0.67
CMTM3-203ENST00000460097 XAGE3Q8WTP9 111 aa19.24■□□□□ 0.67
CMTM3-203ENST00000460097 CLEC4GQ6UXB4 293 aa19.24■□□□□ 0.67
CMTM3-203ENST00000460097 MAP3K15Q6ZN16 1313 aa19.23■□□□□ 0.67
CMTM3-203ENST00000460097 ERVV-1B6SEH8 477 aa19.23■□□□□ 0.67
CMTM3-203ENST00000460097 SLC4A2P04920 1241 aa19.23■□□□□ 0.67
CMTM3-203ENST00000460097 ZNF652Q9Y2D9 606 aa19.23■□□□□ 0.67
CMTM3-203ENST00000460097 MMP10P09238 476 aa19.22■□□□□ 0.67
CMTM3-203ENST00000460097 MCM5P33992 734 aa19.22■□□□□ 0.67
CMTM3-203ENST00000460097 NUCB2P80303 420 aa19.22■□□□□ 0.67
CMTM3-203ENST00000460097 RGL2O15211 777 aa19.21■□□□□ 0.67
CMTM3-203ENST00000460097 TM4SF1P30408 202 aa19.21■□□□□ 0.67
CMTM3-203ENST00000460097 HLFQ16534 295 aa19.21■□□□□ 0.67
CMTM3-203ENST00000460097 ZBTB3Q9H5J0 574 aa19.21■□□□□ 0.67
CMTM3-203ENST00000460097 PHAXQ9H814 394 aaKnown RBP19.21■□□□□ 0.67
CMTM3-203ENST00000460097 PPP1R1BQ9UD71 204 aaPredicted RBP19.21■□□□□ 0.67
CMTM3-203ENST00000460097 ZNF500O60304 480 aaPredicted RBP19.21■□□□□ 0.67
CMTM3-203ENST00000460097 BAG4O95429 457 aaKnown RBP19.2■□□□□ 0.66
CMTM3-203ENST00000460097 NFIXQ14938 502 aa19.2■□□□□ 0.66
CMTM3-203ENST00000460097 RABEP1Q15276 862 aa19.2■□□□□ 0.66
CMTM3-203ENST00000460097 TBC1D9BQ66K14 1250 aa19.2■□□□□ 0.66
CMTM3-203ENST00000460097 KIAA1211Q6ZU35 1233 aa19.2■□□□□ 0.66
CMTM3-203ENST00000460097 PDLIM2Q96JY6 352 aa19.2■□□□□ 0.66
CMTM3-203ENST00000460097 PARP3Q9Y6F1 533 aa19.2■□□□□ 0.66
CMTM3-203ENST00000460097 CYP2E1P05181 493 aaPredicted RBP19.19■□□□□ 0.66
CMTM3-203ENST00000460097 BICDL1Q6ZP65 573 aa19.19■□□□□ 0.66
CMTM3-203ENST00000460097 ANKRD13DQ6ZTN6 518 aa19.19■□□□□ 0.66
CMTM3-203ENST00000460097 GIGYF2Q6Y7W6 1299 aaKnown RBP19.19■□□□□ 0.66
CMTM3-203ENST00000460097 MTERF4Q7Z6M4 381 aaKnown RBP19.19■□□□□ 0.66
CMTM3-203ENST00000460097 SETDB2Q96T68 719 aa19.19■□□□□ 0.66
CMTM3-203ENST00000460097 LNPKQ9C0E8 428 aa19.19■□□□□ 0.66
CMTM3-203ENST00000460097 CWC22Q9HCG8 908 aaKnown RBP19.19■□□□□ 0.66
CMTM3-203ENST00000460097 COL24A1Q17RW2 1714 aa19.18■□□□□ 0.66
CMTM3-203ENST00000460097 CDC45O75419 566 aa19.18■□□□□ 0.66
CMTM3-203ENST00000460097 MSNP26038 577 aaKnown RBP19.18■□□□□ 0.66
CMTM3-203ENST00000460097 TBC1D9Q6ZT07 1266 aa19.18■□□□□ 0.66
CMTM3-203ENST00000460097 PLBD2Q8NHP8 589 aa19.18■□□□□ 0.66
CMTM3-203ENST00000460097 NOL7Q9UMY1 257 aaKnown RBP19.18■□□□□ 0.66
CMTM3-203ENST00000460097 ZBTB7BO15156 539 aaPredicted RBP19.17■□□□□ 0.66
CMTM3-203ENST00000460097 DDX58O95786 925 aaKnown RBP19.17■□□□□ 0.66
CMTM3-203ENST00000460097 POLRMTO00411 1230 aaKnown RBP19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms