RNA–Protein interactions for RNA: ENST00000460060.5

C4A-244, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 3

Gene C4A, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-244ENST00000460060 FRAT1Q92837 279 aaPredicted RBP16.25■□□□□ 0.19
C4A-244ENST00000460060 LTBP3Q9NS15 1303 aa16.24■□□□□ 0.19
C4A-244ENST00000460060 IPO8O15397 1037 aaKnown RBP16.24■□□□□ 0.19
C4A-244ENST00000460060 PLIN1O60240 522 aa16.24■□□□□ 0.19
C4A-244ENST00000460060 NEFLP07196 543 aa16.24■□□□□ 0.19
C4A-244ENST00000460060 NOB1Q9ULX3 412 aaKnown RBP16.24■□□□□ 0.19
C4A-244ENST00000460060 ZNF330Q9Y3S2 320 aaPredicted RBP16.24■□□□□ 0.19
C4A-244ENST00000460060 USP16Q9Y5T5 823 aa16.24■□□□□ 0.19
C4A-244ENST00000460060 SLX4Q8IY92 1834 aa16.24■□□□□ 0.19
C4A-244ENST00000460060 COL11A2P13942 1736 aaPredicted RBP16.23■□□□□ 0.19
C4A-244ENST00000460060 A1BGP04217 495 aa16.23■□□□□ 0.19
C4A-244ENST00000460060 ZKSCAN2Q63HK3 967 aa16.23■□□□□ 0.19
C4A-244ENST00000460060 CNKSR1Q969H4 720 aa16.23■□□□□ 0.19
C4A-244ENST00000460060 SETDB2Q96T68 719 aa16.23■□□□□ 0.19
C4A-244ENST00000460060 TAOK3Q9H2K8 898 aa16.23■□□□□ 0.19
C4A-244ENST00000460060 DBF4Q9UBU7 674 aaPredicted RBP16.23■□□□□ 0.19
C4A-244ENST00000460060 SCN7AQ01118 1682 aa16.23■□□□□ 0.19
C4A-244ENST00000460060 DDNO94850 711 aaPredicted RBP16.22■□□□□ 0.19
C4A-244ENST00000460060 CAMTA2O94983 1202 aa16.22■□□□□ 0.19
C4A-244ENST00000460060 SRGNP10124 158 aa16.22■□□□□ 0.19
C4A-244ENST00000460060 STYK1Q6J9G0 422 aa16.22■□□□□ 0.19
C4A-244ENST00000460060 CHADLQ6NUI6 762 aa16.22■□□□□ 0.19
C4A-244ENST00000460060 CHPF2Q9P2E5 772 aa16.22■□□□□ 0.19
C4A-244ENST00000460060 PCNTO95613 3336 aa16.21■□□□□ 0.19
C4A-244ENST00000460060 MS4A1P11836 297 aa16.21■□□□□ 0.19
C4A-244ENST00000460060 NPM2Q86SE8 214 aaKnown RBP16.21■□□□□ 0.19
C4A-244ENST00000460060 CNBD1Q8NA66 436 aa16.21■□□□□ 0.19
C4A-244ENST00000460060 ARHGAP45Q92619 1136 aa16.21■□□□□ 0.19
C4A-244ENST00000460060 DDX21Q9NR30 783 aaKnown RBP eCLIP16.21■□□□□ 0.19
C4A-244ENST00000460060 CREBZFQ9NS37 354 aa16.21■□□□□ 0.19
C4A-244ENST00000460060 ERBB4Q15303 1308 aa16.2■□□□□ 0.18
C4A-244ENST00000460060 POTEIP0CG38 1075 aa16.2■□□□□ 0.18
C4A-244ENST00000460060 POTEJP0CG39 1038 aa16.2■□□□□ 0.18
C4A-244ENST00000460060 PDIA6Q15084 440 aa16.2■□□□□ 0.18
C4A-244ENST00000460060 PRPF40BQ6NWY9 871 aaKnown RBP16.2■□□□□ 0.18
C4A-244ENST00000460060 ATF7IPQ6VMQ6 1270 aa16.2■□□□□ 0.18
C4A-244ENST00000460060 MASTLQ96GX5 879 aa16.2■□□□□ 0.18
C4A-244ENST00000460060 API5Q9BZZ5 524 aaKnown RBP16.2■□□□□ 0.18
C4A-244ENST00000460060 CACNA1SQ13698 1873 aa16.2■□□□□ 0.18
C4A-244ENST00000460060 PTPRCP08575 1304 aa16.19■□□□□ 0.18
C4A-244ENST00000460060 ST5P78524 1137 aa16.19■□□□□ 0.18
C4A-244ENST00000460060 PDE3AQ14432 1141 aa16.19■□□□□ 0.18
C4A-244ENST00000460060 SOGA3Q5TF21 947 aa16.19■□□□□ 0.18
C4A-244ENST00000460060 G2E3Q7L622 706 aa16.19■□□□□ 0.18
C4A-244ENST00000460060 DZIP3Q86Y13 1208 aaKnown RBP16.19■□□□□ 0.18
C4A-244ENST00000460060 HYPKQ9NX55 129 aa16.19■□□□□ 0.18
C4A-244ENST00000460060 NPHP1O15259 732 aa16.18■□□□□ 0.18
C4A-244ENST00000460060 IRX6P78412 446 aaPredicted RBP16.18■□□□□ 0.18
C4A-244ENST00000460060 FLIIQ13045 1269 aa16.18■□□□□ 0.18
C4A-244ENST00000460060 C7orf43Q8WVR3 580 aa16.18■□□□□ 0.18
C4A-244ENST00000460060 MKRN1Q9UHC7 482 aaKnown RBP16.18■□□□□ 0.18
C4A-244ENST00000460060 ARFGEF2Q9Y6D5 1785 aa16.18■□□□□ 0.18
C4A-244ENST00000460060 NBPF26B4DH59 902 aa16.17■□□□□ 0.18
C4A-244ENST00000460060 ANXA1P04083 346 aa16.17■□□□□ 0.18
C4A-244ENST00000460060 TRIM27P14373 513 aa16.17■□□□□ 0.18
C4A-244ENST00000460060 MYL6BP14649 208 aa16.17■□□□□ 0.18
C4A-244ENST00000460060 PROSER3Q2NL68 480 aa16.17■□□□□ 0.18
C4A-244ENST00000460060 C20orf194Q5TEA3 1177 aa16.17■□□□□ 0.18
C4A-244ENST00000460060 NBPF10Q6P3W6 841 aaKnown RBP16.17■□□□□ 0.18
C4A-244ENST00000460060 CLEC4GQ6UXB4 293 aa16.17■□□□□ 0.18
C4A-244ENST00000460060 DZIP1LQ8IYY4 767 aaKnown RBP16.17■□□□□ 0.18
C4A-244ENST00000460060 NBPF15Q8N660 670 aa16.17■□□□□ 0.18
C4A-244ENST00000460060 PHAXQ9H814 394 aaKnown RBP16.17■□□□□ 0.18
C4A-244ENST00000460060 BCORQ6W2J9 1755 aa16.16■□□□□ 0.18
C4A-244ENST00000460060 IQCA1LA6NCM1 817 aa16.16■□□□□ 0.18
C4A-244ENST00000460060 FTSJ3Q8IY81 847 aaKnown RBP16.16■□□□□ 0.18
C4A-244ENST00000460060 L3MBTL3Q96JM7 780 aaPredicted RBP16.16■□□□□ 0.18
C4A-244ENST00000460060 TNNQ9UQP3 1299 aa16.16■□□□□ 0.18
C4A-244ENST00000460060 SCN4AP35499 1836 aa16.16■□□□□ 0.18
C4A-244ENST00000460060 PASKQ96RG2 1323 aa16.16■□□□□ 0.18
C4A-244ENST00000460060 PIP4K2AP48426 406 aaPredicted RBP16.15■□□□□ 0.18
C4A-244ENST00000460060 FKBP5Q13451 457 aaPredicted RBP16.15■□□□□ 0.18
C4A-244ENST00000460060 LDHDQ86WU2 507 aa16.15■□□□□ 0.18
C4A-244ENST00000460060 NBPF5PQ86XG9 351 aaPredicted RBP16.15■□□□□ 0.18
C4A-244ENST00000460060 PANK1Q8TE04 598 aa16.15■□□□□ 0.18
C4A-244ENST00000460060 CLUAP1Q96AJ1 413 aa16.15■□□□□ 0.18
C4A-244ENST00000460060 TAF1DQ9H5J8 278 aaPredicted RBP16.15■□□□□ 0.18
C4A-244ENST00000460060 KLRG2A4D1S0 409 aaPredicted RBP16.14■□□□□ 0.17
C4A-244ENST00000460060 NPR1P16066 1061 aa16.14■□□□□ 0.17
C4A-244ENST00000460060 CCDC93Q567U6 631 aa16.14■□□□□ 0.17
C4A-244ENST00000460060 LRP10Q7Z4F1 713 aa16.14■□□□□ 0.17
C4A-244ENST00000460060 CNTNAP1P78357 1384 aa16.13■□□□□ 0.17
C4A-244ENST00000460060 DDX58O95786 925 aaKnown RBP16.13■□□□□ 0.17
C4A-244ENST00000460060 ITGBL1O95965 494 aaPredicted RBP16.13■□□□□ 0.17
C4A-244ENST00000460060 RLBP1P12271 317 aa16.13■□□□□ 0.17
C4A-244ENST00000460060 FKBP4Q02790 459 aaKnown RBP eCLIP16.13■□□□□ 0.17
C4A-244ENST00000460060 AIMP1Q12904 312 aaKnown RBP16.13■□□□□ 0.17
C4A-244ENST00000460060 COPS6Q7L5N1 327 aa16.13■□□□□ 0.17
C4A-244ENST00000460060 XAGE3Q8WTP9 111 aa16.13■□□□□ 0.17
C4A-244ENST00000460060 CRBNQ96SW2 442 aa16.13■□□□□ 0.17
C4A-244ENST00000460060 FOXN1O15353 648 aa16.12■□□□□ 0.17
C4A-244ENST00000460060 TPTE2Q6XPS3 522 aa16.12■□□□□ 0.17
C4A-244ENST00000460060 ZNF652Q9Y2D9 606 aa16.12■□□□□ 0.17
C4A-244ENST00000460060 GTF3C3Q9Y5Q9 886 aa16.12■□□□□ 0.17
C4A-244ENST00000460060 ABCC4O15439 1325 aa16.12■□□□□ 0.17
C4A-244ENST00000460060 RGL2O15211 777 aa16.11■□□□□ 0.17
C4A-244ENST00000460060 ERICH6BQ5W0A0 696 aa16.11■□□□□ 0.17
C4A-244ENST00000460060 KSR2Q6VAB6 950 aa16.11■□□□□ 0.17
C4A-244ENST00000460060 TMEM57Q8N5G2 664 aa16.11■□□□□ 0.17
C4A-244ENST00000460060 PRDM10Q9NQV6 1147 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms