RNA–Protein interactions for RNA: ENST00000458721.5

VPS8-214, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 946 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-214ENST00000458721 TRIM6-TRIM34B2RNG4 842 aa7.79□□□□□ -1.16
VPS8-214ENST00000458721 RPS6KA4O75676 772 aa7.79□□□□□ -1.16
VPS8-214ENST00000458721 RFC4P35249 363 aa7.79□□□□□ -1.16
VPS8-214ENST00000458721 FSTL1Q12841 308 aa7.79□□□□□ -1.16
VPS8-214ENST00000458721 TSR1Q2NL82 804 aaKnown RBP7.79□□□□□ -1.16
VPS8-214ENST00000458721 POLKQ9UBT6 870 aa7.79□□□□□ -1.16
VPS8-214ENST00000458721 PARP3Q9Y6F1 533 aa7.79□□□□□ -1.16
VPS8-214ENST00000458721 USP42Q9H9J4 1324 aaKnown RBP7.78□□□□□ -1.16
VPS8-214ENST00000458721 AFDNP55196 1824 aaKnown RBP7.78□□□□□ -1.16
VPS8-214ENST00000458721 PPM1GO15355 546 aaPredicted RBP7.78□□□□□ -1.16
VPS8-214ENST00000458721 GYS1P13807 737 aa7.78□□□□□ -1.16
VPS8-214ENST00000458721 EIF4A2Q14240 407 aaKnown RBP7.78□□□□□ -1.16
VPS8-214ENST00000458721 ANKK1Q8NFD2 765 aa7.78□□□□□ -1.16
VPS8-214ENST00000458721 BCS1LQ9Y276 419 aa7.78□□□□□ -1.16
VPS8-214ENST00000458721 SCN7AQ01118 1682 aa7.78□□□□□ -1.16
VPS8-214ENST00000458721 PLEKHO1Q53GL0 409 aaPredicted RBP7.77□□□□□ -1.17
VPS8-214ENST00000458721 C16orf71Q8IYS4 520 aaPredicted RBP7.77□□□□□ -1.17
VPS8-214ENST00000458721 DNAJC5GQ8N7S2 189 aa7.77□□□□□ -1.17
VPS8-214ENST00000458721 JMYQ8N9B5 988 aa7.77□□□□□ -1.17
VPS8-214ENST00000458721 ARHGEF1Q92888 912 aaKnown RBP7.77□□□□□ -1.17
VPS8-214ENST00000458721 PIM2Q9P1W9 311 aa7.77□□□□□ -1.17
VPS8-214ENST00000458721 KCPQ6ZWJ8 1503 aa7.77□□□□□ -1.17
VPS8-214ENST00000458721 ARFGEF2Q9Y6D5 1785 aa7.76□□□□□ -1.17
VPS8-214ENST00000458721 DICER1Q9UPY3 1922 aaKnown RBP7.76□□□□□ -1.17
VPS8-214ENST00000458721 FCHSD2O94868 740 aa7.76□□□□□ -1.17
VPS8-214ENST00000458721 DALRD3Q5D0E6 543 aaKnown RBP7.76□□□□□ -1.17
VPS8-214ENST00000458721 C1orf141Q5JVX7 400 aa7.76□□□□□ -1.17
VPS8-214ENST00000458721 SLC4A9Q96Q91 983 aa7.76□□□□□ -1.17
VPS8-214ENST00000458721 A0A0G2JLW4 131 aa7.75□□□□□ -1.17
VPS8-214ENST00000458721 DPEP1P16444 411 aa7.75□□□□□ -1.17
VPS8-214ENST00000458721 OSBPP22059 807 aa7.75□□□□□ -1.17
VPS8-214ENST00000458721 CRKLP46109 303 aaKnown RBP7.75□□□□□ -1.17
VPS8-214ENST00000458721 CABP4P57796 275 aa7.75□□□□□ -1.17
VPS8-214ENST00000458721 ZNF530Q6P9A1 599 aaPredicted RBP7.75□□□□□ -1.17
VPS8-214ENST00000458721 ARHGAP27Q6ZUM4 889 aa7.75□□□□□ -1.17
VPS8-214ENST00000458721 PACS2Q86VP3 889 aa7.75□□□□□ -1.17
VPS8-214ENST00000458721 KLRG1Q96E93 195 aa7.75□□□□□ -1.17
VPS8-214ENST00000458721 NMRK2Q9NPI5 230 aa7.75□□□□□ -1.17
VPS8-214ENST00000458721 KCNA3P22001 575 aa7.74□□□□□ -1.17
VPS8-214ENST00000458721 MTHFSP49914 203 aa7.74□□□□□ -1.17
VPS8-214ENST00000458721 PLCB2Q00722 1185 aa7.74□□□□□ -1.17
VPS8-214ENST00000458721 C9orf131Q5VYM1 1079 aa7.74□□□□□ -1.17
VPS8-214ENST00000458721 SMIM5Q71RC9 77 aa7.74□□□□□ -1.17
VPS8-214ENST00000458721 SMC1BQ8NDV3 1235 aa7.74□□□□□ -1.17
VPS8-214ENST00000458721 KCNV2Q8TDN2 545 aa7.74□□□□□ -1.17
VPS8-214ENST00000458721 ZFRQ96KR1 1074 aaKnown RBP7.74□□□□□ -1.17
VPS8-214ENST00000458721 SEPT9Q9UHD8 586 aaPredicted RBP7.74□□□□□ -1.17
VPS8-214ENST00000458721 WWC3Q9ULE0 1092 aa7.74□□□□□ -1.17
VPS8-214ENST00000458721 FER1L6Q2WGJ9 1857 aa7.74□□□□□ -1.17
VPS8-214ENST00000458721 SIPA1L3O60292 1781 aaPredicted RBP7.74□□□□□ -1.17
VPS8-214ENST00000458721 COL15A1P39059 1388 aa7.73□□□□□ -1.17
VPS8-214ENST00000458721 CCDC88AQ3V6T2 1871 aa7.73□□□□□ -1.17
VPS8-214ENST00000458721 POLRMTO00411 1230 aaKnown RBP7.73□□□□□ -1.17
VPS8-214ENST00000458721 PRSS12P56730 875 aa7.73□□□□□ -1.17
VPS8-214ENST00000458721 VSIG10Q8N0Z9 540 aa7.73□□□□□ -1.17
VPS8-214ENST00000458721 CDCA7LQ96GN5 454 aa7.73□□□□□ -1.17
VPS8-214ENST00000458721 RNF181Q9P0P0 153 aa7.73□□□□□ -1.17
VPS8-214ENST00000458721 TSKSQ9UJT2 592 aa7.73□□□□□ -1.17
VPS8-214ENST00000458721 PDZRN3Q9UPQ7 1066 aa7.73□□□□□ -1.17
VPS8-214ENST00000458721 BCORQ6W2J9 1755 aa7.73□□□□□ -1.17
VPS8-214ENST00000458721 SOS1Q07889 1333 aaPredicted RBP7.73□□□□□ -1.17
VPS8-214ENST00000458721 COL11A2P13942 1736 aaPredicted RBP7.72□□□□□ -1.17
VPS8-214ENST00000458721 SOWAHBA6NEL2 793 aa7.72□□□□□ -1.17
VPS8-214ENST00000458721 ZPR1O75312 459 aa7.72□□□□□ -1.17
VPS8-214ENST00000458721 LMNB1P20700 586 aa7.72□□□□□ -1.17
VPS8-214ENST00000458721 DDR1Q08345 913 aa7.72□□□□□ -1.17
VPS8-214ENST00000458721 AKAP4Q5JQC9 854 aa7.72□□□□□ -1.17
VPS8-214ENST00000458721 ANKRD31Q8N7Z5 1873 aa7.72□□□□□ -1.17
VPS8-214ENST00000458721 PCNTO95613 3336 aa7.72□□□□□ -1.17
VPS8-214ENST00000458721 PTCD1O75127 700 aaKnown RBP7.71□□□□□ -1.18
VPS8-214ENST00000458721 TM4SF1P30408 202 aa7.71□□□□□ -1.18
VPS8-214ENST00000458721 BCAMP50895 628 aa7.71□□□□□ -1.18
VPS8-214ENST00000458721 NFATC2IPQ8NCF5 419 aa7.71□□□□□ -1.18
VPS8-214ENST00000458721 SLC52A2Q9HAB3 445 aa7.71□□□□□ -1.18
VPS8-214ENST00000458721 NARFQ9UHQ1 456 aa7.71□□□□□ -1.18
VPS8-214ENST00000458721 SCN4AP35499 1836 aa7.71□□□□□ -1.18
VPS8-214ENST00000458721 GLTPD2A6NH11 291 aa7.7□□□□□ -1.18
VPS8-214ENST00000458721 VEGFAP15692 232 aaPredicted RBP7.7□□□□□ -1.18
VPS8-214ENST00000458721 EIF4G2P78344 907 aaKnown RBP eCLIP7.7□□□□□ -1.18
VPS8-214ENST00000458721 INTS5Q6P9B9 1019 aaKnown RBP7.7□□□□□ -1.18
VPS8-214ENST00000458721 CDHR5Q9HBB8 845 aa7.7□□□□□ -1.18
VPS8-214ENST00000458721 RBM27Q9P2N5 1060 aaKnown RBP7.7□□□□□ -1.18
VPS8-214ENST00000458721 SRP68Q9UHB9 627 aaKnown RBP7.7□□□□□ -1.18
VPS8-214ENST00000458721 LTBP3Q9NS15 1303 aa7.7□□□□□ -1.18
VPS8-214ENST00000458721 CARMIL3Q8ND23 1372 aa7.7□□□□□ -1.18
VPS8-214ENST00000458721 NBPF26B4DH59 902 aa7.69□□□□□ -1.18
VPS8-214ENST00000458721 TNNT2P45379 298 aaPredicted RBP7.69□□□□□ -1.18
VPS8-214ENST00000458721 SULT6B1Q6IMI4 303 aa7.69□□□□□ -1.18
VPS8-214ENST00000458721 NYAP1Q6ZVC0 841 aa7.69□□□□□ -1.18
VPS8-214ENST00000458721 MORC1Q86VD1 984 aa7.69□□□□□ -1.18
VPS8-214ENST00000458721 AEBP1Q8IUX7 1158 aa7.69□□□□□ -1.18
VPS8-214ENST00000458721 TTLL6Q8N841 843 aa7.69□□□□□ -1.18
VPS8-214ENST00000458721 LRCH3Q96II8 777 aa7.69□□□□□ -1.18
VPS8-214ENST00000458721 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.69□□□□□ -1.18
VPS8-214ENST00000458721 CACNA1SQ13698 1873 aa7.68□□□□□ -1.18
VPS8-214ENST00000458721 A0A087WZG4 1122 aa7.68□□□□□ -1.18
VPS8-214ENST00000458721 CYP19A1P11511 503 aaPredicted RBP7.68□□□□□ -1.18
VPS8-214ENST00000458721 CHRNA5P30532 468 aa7.68□□□□□ -1.18
VPS8-214ENST00000458721 IL13P35225 146 aa7.68□□□□□ -1.18
VPS8-214ENST00000458721 TRIM26Q12899 539 aaPredicted RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms