RNA–Protein interactions for RNA: ENST00000458188.2

CLTCL1-204, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-204ENST00000458188 NEXNQ0ZGT2 675 aa11□□□□□ -0.65
CLTCL1-204ENST00000458188 NLRP10Q86W26 655 aa11□□□□□ -0.65
CLTCL1-204ENST00000458188 NUTM1Q86Y26 1132 aa11□□□□□ -0.65
CLTCL1-204ENST00000458188 SLC16A10Q8TF71 515 aa11□□□□□ -0.65
CLTCL1-204ENST00000458188 FAM89AQ96GI7 184 aa11□□□□□ -0.65
CLTCL1-204ENST00000458188 SRCIN1Q9C0H9 1055 aa11□□□□□ -0.65
CLTCL1-204ENST00000458188 COG6Q9Y2V7 657 aa11□□□□□ -0.65
CLTCL1-204ENST00000458188 POLRMTO00411 1230 aaKnown RBP10.99□□□□□ -0.65
CLTCL1-204ENST00000458188 NPHP1O15259 732 aa10.99□□□□□ -0.65
CLTCL1-204ENST00000458188 HSP90AB3PQ58FF7 597 aa10.99□□□□□ -0.65
CLTCL1-204ENST00000458188 NBPF5PQ86XG9 351 aaPredicted RBP10.99□□□□□ -0.65
CLTCL1-204ENST00000458188 ITPRIPQ8IWB1 547 aa10.99□□□□□ -0.65
CLTCL1-204ENST00000458188 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.99□□□□□ -0.65
CLTCL1-204ENST00000458188 LINS1Q8NG48 757 aa10.99□□□□□ -0.65
CLTCL1-204ENST00000458188 TRMT112Q9UI30 125 aaKnown RBP10.99□□□□□ -0.65
CLTCL1-204ENST00000458188 PARP3Q9Y6F1 533 aa10.99□□□□□ -0.65
CLTCL1-204ENST00000458188 GTF2E1P29083 439 aaPredicted RBP10.98□□□□□ -0.65
CLTCL1-204ENST00000458188 GCKRQ14397 625 aa10.98□□□□□ -0.65
CLTCL1-204ENST00000458188 ERFEQ4G0M1 354 aa10.98□□□□□ -0.65
CLTCL1-204ENST00000458188 UTP14AQ9BVJ6 771 aaKnown RBP10.98□□□□□ -0.65
CLTCL1-204ENST00000458188 CWC25Q9NXE8 425 aaPredicted RBP10.98□□□□□ -0.65
CLTCL1-204ENST00000458188 ABCC4O15439 1325 aa10.98□□□□□ -0.65
CLTCL1-204ENST00000458188 UBR3Q6ZT12 1888 aa10.98□□□□□ -0.65
CLTCL1-204ENST00000458188 NBPF7P0C2Y1 421 aaPredicted RBP10.97□□□□□ -0.65
CLTCL1-204ENST00000458188 HCLS1P14317 486 aaPredicted RBP10.97□□□□□ -0.65
CLTCL1-204ENST00000458188 CCT4P50991 539 aaKnown RBP10.97□□□□□ -0.65
CLTCL1-204ENST00000458188 INTS3Q68E01 1043 aaKnown RBP10.97□□□□□ -0.65
CLTCL1-204ENST00000458188 CCDC191Q8NCU4 936 aa10.97□□□□□ -0.65
CLTCL1-204ENST00000458188 CRBNQ96SW2 442 aa10.97□□□□□ -0.65
CLTCL1-204ENST00000458188 C9orf78Q9NZ63 289 aaPredicted RBP10.97□□□□□ -0.65
CLTCL1-204ENST00000458188 ATP10DQ9P241 1426 aa10.97□□□□□ -0.65
CLTCL1-204ENST00000458188 NTSR2O95665 410 aa10.96□□□□□ -0.65
CLTCL1-204ENST00000458188 TRIM28Q13263 835 aaKnown RBP10.96□□□□□ -0.65
CLTCL1-204ENST00000458188 PARP10Q53GL7 1025 aa10.96□□□□□ -0.65
CLTCL1-204ENST00000458188 PRR5LQ6MZQ0 368 aa10.96□□□□□ -0.65
CLTCL1-204ENST00000458188 TPTE2Q6XPS3 522 aa10.96□□□□□ -0.65
CLTCL1-204ENST00000458188 UBE3BQ7Z3V4 1068 aa10.96□□□□□ -0.65
CLTCL1-204ENST00000458188 PPP1R42Q7Z4L9 355 aa10.96□□□□□ -0.65
CLTCL1-204ENST00000458188 CCDC85AQ96PX6 553 aaPredicted RBP10.96□□□□□ -0.65
CLTCL1-204ENST00000458188 MEIS3Q99687 375 aa10.96□□□□□ -0.65
CLTCL1-204ENST00000458188 USP44Q9H0E7 712 aa10.96□□□□□ -0.65
CLTCL1-204ENST00000458188 TUBGCP6Q96RT7 1819 aa10.95□□□□□ -0.66
CLTCL1-204ENST00000458188 CARMIL3Q8ND23 1372 aa10.95□□□□□ -0.66
CLTCL1-204ENST00000458188 RNF123Q5XPI4 1314 aa10.95□□□□□ -0.66
CLTCL1-204ENST00000458188 H7C1W4 665 aa10.95□□□□□ -0.66
CLTCL1-204ENST00000458188 ALDH1L1O75891 902 aa10.95□□□□□ -0.66
CLTCL1-204ENST00000458188 APLP1P51693 650 aa10.95□□□□□ -0.66
CLTCL1-204ENST00000458188 C3orf67Q6ZVT6 689 aa10.95□□□□□ -0.66
CLTCL1-204ENST00000458188 CNBD1Q8NA66 436 aa10.95□□□□□ -0.66
CLTCL1-204ENST00000458188 ZBTB38Q8NAP3 1195 aaPredicted RBP10.95□□□□□ -0.66
CLTCL1-204ENST00000458188 ZNF526Q8TF50 670 aaPredicted RBP10.95□□□□□ -0.66
CLTCL1-204ENST00000458188 C1orf115Q9H7X2 142 aa10.95□□□□□ -0.66
CLTCL1-204ENST00000458188 SH3TC1Q8TE82 1336 aa10.94□□□□□ -0.66
CLTCL1-204ENST00000458188 GRM8O00222 908 aa10.94□□□□□ -0.66
CLTCL1-204ENST00000458188 IRS4O14654 1257 aaPredicted RBP10.94□□□□□ -0.66
CLTCL1-204ENST00000458188 ZBTB7BO15156 539 aaPredicted RBP10.94□□□□□ -0.66
CLTCL1-204ENST00000458188 RGL2O15211 777 aa10.94□□□□□ -0.66
CLTCL1-204ENST00000458188 CAPN15O75808 1086 aa10.94□□□□□ -0.66
CLTCL1-204ENST00000458188 PCCAP05165 728 aaPredicted RBP10.94□□□□□ -0.66
CLTCL1-204ENST00000458188 MS4A1P11836 297 aa10.94□□□□□ -0.66
CLTCL1-204ENST00000458188 YBX3P16989 372 aaKnown RBP eCLIP10.94□□□□□ -0.66
CLTCL1-204ENST00000458188 PDE3AQ14432 1141 aa10.94□□□□□ -0.66
CLTCL1-204ENST00000458188 MVPQ14764 893 aaKnown RBP10.94□□□□□ -0.66
CLTCL1-204ENST00000458188 EPHA10Q5JZY3 1008 aa10.94□□□□□ -0.66
CLTCL1-204ENST00000458188 NLGN2Q8NFZ4 835 aa10.94□□□□□ -0.66
CLTCL1-204ENST00000458188 EXOC6Q8TAG9 804 aa10.94□□□□□ -0.66
CLTCL1-204ENST00000458188 SUCLG2Q96I99 432 aa10.94□□□□□ -0.66
CLTCL1-204ENST00000458188 WWC3Q9ULE0 1092 aa10.94□□□□□ -0.66
CLTCL1-204ENST00000458188 GOLGB1Q14789 3259 aaKnown RBP10.94□□□□□ -0.66
CLTCL1-204ENST00000458188 ABCC12Q96J65 1359 aa10.93□□□□□ -0.66
CLTCL1-204ENST00000458188 C4AP0C0L4 1744 aa10.93□□□□□ -0.66
CLTCL1-204ENST00000458188 CASP7P55210 303 aa10.93□□□□□ -0.66
CLTCL1-204ENST00000458188 ST5P78524 1137 aa10.93□□□□□ -0.66
CLTCL1-204ENST00000458188 NYXQ9GZU5 481 aa10.93□□□□□ -0.66
CLTCL1-204ENST00000458188 UBTFL1P0CB47 393 aaPredicted RBP10.92□□□□□ -0.66
CLTCL1-204ENST00000458188 CHRNA5P30532 468 aa10.92□□□□□ -0.66
CLTCL1-204ENST00000458188 KAZALD1Q96I82 304 aa10.92□□□□□ -0.66
CLTCL1-204ENST00000458188 LRRFIP2Q9Y608 721 aaKnown RBP10.92□□□□□ -0.66
CLTCL1-204ENST00000458188 A0A0G2JLW4 131 aa10.91□□□□□ -0.66
CLTCL1-204ENST00000458188 FOXO4P98177 505 aa10.91□□□□□ -0.66
CLTCL1-204ENST00000458188 SLC10A5Q5PT55 438 aa10.91□□□□□ -0.66
CLTCL1-204ENST00000458188 CHMP3Q9Y3E7 222 aa10.91□□□□□ -0.66
CLTCL1-204ENST00000458188 SCN7AQ01118 1682 aa10.9□□□□□ -0.66
CLTCL1-204ENST00000458188 PDE8AO60658 829 aa10.9□□□□□ -0.66
CLTCL1-204ENST00000458188 LMBR1LQ6UX01 489 aa10.9□□□□□ -0.66
CLTCL1-204ENST00000458188 C2CD5Q86YS7 1000 aa10.9□□□□□ -0.66
CLTCL1-204ENST00000458188 NLRP3Q96P20 1036 aa10.9□□□□□ -0.66
CLTCL1-204ENST00000458188 BRIP1Q9BX63 1249 aa10.9□□□□□ -0.66
CLTCL1-204ENST00000458188 BICC1Q9H694 974 aaKnown RBP10.9□□□□□ -0.66
CLTCL1-204ENST00000458188 DDX19BQ9UMR2 479 aa10.9□□□□□ -0.66
CLTCL1-204ENST00000458188 UTYO14607 1347 aa10.89□□□□□ -0.67
CLTCL1-204ENST00000458188 GNAI2P04899 355 aa10.89□□□□□ -0.67
CLTCL1-204ENST00000458188 GNAI3P08754 354 aa10.89□□□□□ -0.67
CLTCL1-204ENST00000458188 DPEP1P16444 411 aa10.89□□□□□ -0.67
CLTCL1-204ENST00000458188 SLC51AQ86UW1 340 aa10.89□□□□□ -0.67
CLTCL1-204ENST00000458188 ANKRD44Q8N8A2 993 aa10.89□□□□□ -0.67
CLTCL1-204ENST00000458188 TTLL11Q8NHH1 800 aa10.89□□□□□ -0.67
CLTCL1-204ENST00000458188 ZNF622Q969S3 477 aaKnown RBP eCLIP10.89□□□□□ -0.67
CLTCL1-204ENST00000458188 SEC31BQ9NQW1 1179 aa10.89□□□□□ -0.67
CLTCL1-204ENST00000458188 ZBTB40Q9NUA8 1239 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms