RNA–Protein interactions for RNA: ENST00000457828.6

LSS-205, Transcript of lanosterol synthase, humanhuman

TSL 1 (best) BASIC

Gene LSS, Length 4,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-205ENST00000457828 KIF1BPQ96EK5 621 aa19.28■□□□□ 0.68
LSS-205ENST00000457828 PPP1R9BQ96SB3 815 aa19.28■□□□□ 0.68
LSS-205ENST00000457828 SLC52A2Q9HAB3 445 aa19.28■□□□□ 0.68
LSS-205ENST00000457828 LDHAL6AQ6ZMR3 332 aa19.27■□□□□ 0.68
LSS-205ENST00000457828 CCDC73Q6ZRK6 1079 aa19.27■□□□□ 0.68
LSS-205ENST00000457828 NBPF14Q5TI25 921 aa19.27■□□□□ 0.68
LSS-205ENST00000457828 ZHX1Q9UKY1 873 aaPredicted RBP19.27■□□□□ 0.68
LSS-205ENST00000457828 RBM5P52756 815 aaKnown RBP eCLIP19.27■□□□□ 0.672e-6■□□□□ 9.6
LSS-205ENST00000457828 KSR2Q6VAB6 950 aa19.27■□□□□ 0.67
LSS-205ENST00000457828 RALYLQ86SE5 291 aaKnown RBP19.26■□□□□ 0.67
LSS-205ENST00000457828 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.26■□□□□ 0.67
LSS-205ENST00000457828 ATP7BP35670 1465 aa19.26■□□□□ 0.67
LSS-205ENST00000457828 DHX16O60231 1041 aaKnown RBP19.26■□□□□ 0.67
LSS-205ENST00000457828 PDCL2Q8N4E4 241 aa19.26■□□□□ 0.67
LSS-205ENST00000457828 ZNF496Q96IT1 587 aaPredicted RBP19.26■□□□□ 0.67
LSS-205ENST00000457828 APBA3O96018 575 aa19.26■□□□□ 0.67
LSS-205ENST00000457828 SPATA32Q96LK8 384 aa19.26■□□□□ 0.67
LSS-205ENST00000457828 CARD10Q9BWT7 1032 aa19.26■□□□□ 0.67
LSS-205ENST00000457828 BLOC1S2Q6QNY1 142 aa19.25■□□□□ 0.67
LSS-205ENST00000457828 DNAJC10Q8IXB1 793 aa19.25■□□□□ 0.67
LSS-205ENST00000457828 ABCC4O15439 1325 aa19.25■□□□□ 0.67
LSS-205ENST00000457828 A1BGP04217 495 aa19.25■□□□□ 0.67
LSS-205ENST00000457828 IFIT1P09914 478 aaKnown RBP19.25■□□□□ 0.67
LSS-205ENST00000457828 NOLC1Q14978 699 aaKnown RBP eCLIP19.25■□□□□ 0.673e-7■■□□□ 11.8
LSS-205ENST00000457828 DDX46Q7L014 1031 aaKnown RBP19.25■□□□□ 0.67
LSS-205ENST00000457828 C6orf229H3BNL8 230 aa19.25■□□□□ 0.67
LSS-205ENST00000457828 AKAP17AQ02040 695 aaKnown RBP19.25■□□□□ 0.67
LSS-205ENST00000457828 MAP3K11Q16584 847 aa19.25■□□□□ 0.67
LSS-205ENST00000457828 TFIP11Q9UBB9 837 aaKnown RBP19.25■□□□□ 0.67
LSS-205ENST00000457828 GPT2Q8TD30 523 aa19.25■□□□□ 0.67
LSS-205ENST00000457828 PHAXQ9H814 394 aaKnown RBP19.25■□□□□ 0.67
LSS-205ENST00000457828 IDH1O75874 414 aaKnown RBP19.24■□□□□ 0.67
LSS-205ENST00000457828 GJB2P29033 226 aa19.24■□□□□ 0.67
LSS-205ENST00000457828 SDF4Q9BRK5 362 aa19.24■□□□□ 0.67
LSS-205ENST00000457828 ERBB3P21860 1342 aa19.24■□□□□ 0.67
LSS-205ENST00000457828 CPLX2Q6PUV4 134 aaKnown RBP19.24■□□□□ 0.67
LSS-205ENST00000457828 RAI14Q9P0K7 980 aa19.24■□□□□ 0.67
LSS-205ENST00000457828 LRP2BPQ9P2M1 347 aa19.24■□□□□ 0.67
LSS-205ENST00000457828 MTMR7Q9Y216 660 aa19.24■□□□□ 0.67
LSS-205ENST00000457828 PHKG2P15735 406 aa19.24■□□□□ 0.67
LSS-205ENST00000457828 HOMER1Q86YM7 354 aa19.24■□□□□ 0.67
LSS-205ENST00000457828 RAB11FIP3O75154 756 aa19.23■□□□□ 0.67
LSS-205ENST00000457828 CHMLP26374 656 aa19.23■□□□□ 0.67
LSS-205ENST00000457828 UBE2HP62256 183 aa19.23■□□□□ 0.67
LSS-205ENST00000457828 C17orf53Q8N3J3 647 aaPredicted RBP19.23■□□□□ 0.67
LSS-205ENST00000457828 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.23■□□□□ 0.674e-8■■■■□ 24.6
LSS-205ENST00000457828 WDR17Q8IZU2 1322 aa19.23■□□□□ 0.67
LSS-205ENST00000457828 NFXL1Q6ZNB6 911 aa19.23■□□□□ 0.67
LSS-205ENST00000457828 CCDC8Q9H0W5 538 aaPredicted RBP19.23■□□□□ 0.67
LSS-205ENST00000457828 GLRX3O76003 335 aaKnown RBP19.23■□□□□ 0.67
LSS-205ENST00000457828 ZSCAN22P10073 491 aaPredicted RBP19.23■□□□□ 0.67
LSS-205ENST00000457828 FILIP1Q7Z7B0 1213 aa19.23■□□□□ 0.67
LSS-205ENST00000457828 IL17REQ8NFR9 667 aa19.23■□□□□ 0.67
LSS-205ENST00000457828 DDX11Q96FC9 970 aa19.23■□□□□ 0.67
LSS-205ENST00000457828 DDX21Q9NR30 783 aaKnown RBP eCLIP19.23■□□□□ 0.67
LSS-205ENST00000457828 NECAB1Q8N987 351 aa19.23■□□□□ 0.67
LSS-205ENST00000457828 TCEANC2Q96MN5 208 aa19.23■□□□□ 0.67
LSS-205ENST00000457828 GADD45BO75293 160 aaPredicted RBP19.22■□□□□ 0.67
LSS-205ENST00000457828 CPA1P15085 419 aa19.22■□□□□ 0.67
LSS-205ENST00000457828 CWF19L2Q2TBE0 894 aaKnown RBP19.22■□□□□ 0.67
LSS-205ENST00000457828 TRAPPC3LQ5T215 181 aa19.22■□□□□ 0.67
LSS-205ENST00000457828 CDC5LQ99459 802 aaKnown RBP19.22■□□□□ 0.67
LSS-205ENST00000457828 SETD1BQ9UPS6 1966 aaKnown RBP19.22■□□□□ 0.67
LSS-205ENST00000457828 ANKARQ7Z5J8 1434 aa19.22■□□□□ 0.67
LSS-205ENST00000457828 SPDYE4A6NLX3 237 aa19.22■□□□□ 0.67
LSS-205ENST00000457828 CPLX1O14810 134 aa19.22■□□□□ 0.67
LSS-205ENST00000457828 CCDC112Q8NEF3 446 aa19.22■□□□□ 0.67
LSS-205ENST00000457828 ZSCAN31Q96LW9 406 aaPredicted RBP19.22■□□□□ 0.67
LSS-205ENST00000457828 CHL1O00533 1208 aa19.22■□□□□ 0.67
LSS-205ENST00000457828 C16orf45Q96MC5 204 aaPredicted RBP19.22■□□□□ 0.67
LSS-205ENST00000457828 NLRP3Q96P20 1036 aa19.22■□□□□ 0.67
LSS-205ENST00000457828 AKAP2Q9Y2D5 859 aa19.22■□□□□ 0.67
LSS-205ENST00000457828 RIMS1Q86UR5 1692 aaKnown RBP19.21■□□□□ 0.67
LSS-205ENST00000457828 ERICH2A1L162 156 aa19.21■□□□□ 0.67
LSS-205ENST00000457828 ANAPC15P60006 121 aa19.21■□□□□ 0.67
LSS-205ENST00000457828 CAVIN4Q5BKX8 364 aa19.21■□□□□ 0.67
LSS-205ENST00000457828 STK11IPQ8N1F8 1099 aa19.21■□□□□ 0.67
LSS-205ENST00000457828 A0A0U1RQG5 324 aaPredicted RBP19.21■□□□□ 0.67
LSS-205ENST00000457828 RXRBP28702 533 aa19.21■□□□□ 0.67
LSS-205ENST00000457828 ST5P78524 1137 aa19.21■□□□□ 0.67
LSS-205ENST00000457828 DNM1Q05193 864 aaKnown RBP19.21■□□□□ 0.67
LSS-205ENST00000457828 ZNF772Q68DY9 489 aaPredicted RBP19.21■□□□□ 0.67
LSS-205ENST00000457828 PPP4R3BQ5MIZ7 849 aa19.21■□□□□ 0.66
LSS-205ENST00000457828 LINS1Q8NG48 757 aa19.21■□□□□ 0.66
LSS-205ENST00000457828 RHPN1Q8TCX5 695 aa19.21■□□□□ 0.66
LSS-205ENST00000457828 GRM8O00222 908 aa19.2■□□□□ 0.66
LSS-205ENST00000457828 KINO60870 393 aaKnown RBP19.2■□□□□ 0.66
LSS-205ENST00000457828 LMBR1LQ6UX01 489 aa19.2■□□□□ 0.66
LSS-205ENST00000457828 AATKQ6ZMQ8 1374 aa19.2■□□□□ 0.66
LSS-205ENST00000457828 RRP12Q5JTH9 1297 aaKnown RBP19.2■□□□□ 0.66
LSS-205ENST00000457828 VPS53Q5VIR6 699 aa19.2■□□□□ 0.66
LSS-205ENST00000457828 TPTE2Q6XPS3 522 aa19.2■□□□□ 0.66
LSS-205ENST00000457828 CCAR2Q8N163 923 aaKnown RBP19.2■□□□□ 0.66
LSS-205ENST00000457828 TSC1Q92574 1164 aa19.2■□□□□ 0.66
LSS-205ENST00000457828 BOLA2Q9H3K6 86 aa19.2■□□□□ 0.66
LSS-205ENST00000457828 CTDP1Q9Y5B0 961 aaPredicted RBP19.2■□□□□ 0.66
LSS-205ENST00000457828 MADDQ8WXG6 1647 aa19.19■□□□□ 0.66
LSS-205ENST00000457828 ATP8B2P98198 1209 aa19.19■□□□□ 0.66
LSS-205ENST00000457828 UNC5CLQ8IV45 518 aa19.19■□□□□ 0.66
LSS-205ENST00000457828 KIF2CQ99661 725 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms