RNA–Protein interactions for RNA: ENST00000457662.2

TRIM13-206, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-206ENST00000457662 PTPRCP08575 1304 aa23.17■■□□□ 1.3
TRIM13-206ENST00000457662 NUTM1Q86Y26 1132 aa23.16■■□□□ 1.3
TRIM13-206ENST00000457662 A0A0G2JLW4 131 aa23.15■■□□□ 1.3
TRIM13-206ENST00000457662 ERFEQ4G0M1 354 aa23.15■■□□□ 1.3
TRIM13-206ENST00000457662 DPEP1P16444 411 aa23.14■■□□□ 1.29
TRIM13-206ENST00000457662 CWC25Q9NXE8 425 aaPredicted RBP23.14■■□□□ 1.29
TRIM13-206ENST00000457662 F6X3S4 739 aa23.13■■□□□ 1.29
TRIM13-206ENST00000457662 H0YIN7 160 aa23.13■■□□□ 1.29
TRIM13-206ENST00000457662 IGKV5-2P06315 115 aa23.13■■□□□ 1.29
TRIM13-206ENST00000457662 SLC10A5Q5PT55 438 aa23.13■■□□□ 1.29
TRIM13-206ENST00000457662 LINS1Q8NG48 757 aa23.13■■□□□ 1.29
TRIM13-206ENST00000457662 SH3TC1Q8TE82 1336 aa23.12■■□□□ 1.29
TRIM13-206ENST00000457662 PXDNLA1KZ92 1463 aa23.12■■□□□ 1.29
TRIM13-206ENST00000457662 KLRG2A4D1S0 409 aaPredicted RBP23.11■■□□□ 1.29
TRIM13-206ENST00000457662 CHRNA5P30532 468 aa23.11■■□□□ 1.29
TRIM13-206ENST00000457662 C2CD5Q86YS7 1000 aa23.11■■□□□ 1.29
TRIM13-206ENST00000457662 NOB1Q9ULX3 412 aaKnown RBP23.11■■□□□ 1.29
TRIM13-206ENST00000457662 KIF16BQ96L93 1317 aa23.11■■□□□ 1.29
TRIM13-206ENST00000457662 DCAF8L1A6NGE4 600 aa23.11■■□□□ 1.29
TRIM13-206ENST00000457662 NEURL1BA8MQ27 555 aa23.11■■□□□ 1.29
TRIM13-206ENST00000457662 KCNA3P22001 575 aa23.11■■□□□ 1.29
TRIM13-206ENST00000457662 ZBTB38Q8NAP3 1195 aaPredicted RBP23.11■■□□□ 1.29
TRIM13-206ENST00000457662 CWF19L2Q2TBE0 894 aaKnown RBP23.1■■□□□ 1.29
TRIM13-206ENST00000457662 BEND3Q5T5X7 828 aa23.1■■□□□ 1.29
TRIM13-206ENST00000457662 SLC4A10Q6U841 1118 aa23.1■■□□□ 1.29
TRIM13-206ENST00000457662 FAM89AQ96GI7 184 aa23.1■■□□□ 1.29
TRIM13-206ENST00000457662 PIM2Q9P1W9 311 aa23.1■■□□□ 1.29
TRIM13-206ENST00000457662 IPO8O15397 1037 aaKnown RBP23.09■■□□□ 1.29
TRIM13-206ENST00000457662 BCAR3O75815 825 aa23.09■■□□□ 1.29
TRIM13-206ENST00000457662 PCCAP05165 728 aaPredicted RBP23.09■■□□□ 1.29
TRIM13-206ENST00000457662 HSP90B1P14625 803 aaKnown RBP23.09■■□□□ 1.29
TRIM13-206ENST00000457662 SYNE4Q8N205 404 aa23.09■■□□□ 1.29
TRIM13-206ENST00000457662 ARHGAP45Q92619 1136 aa23.09■■□□□ 1.29
TRIM13-206ENST00000457662 NLRP3Q96P20 1036 aa23.09■■□□□ 1.29
TRIM13-206ENST00000457662 API5Q9BZZ5 524 aaKnown RBP23.09■■□□□ 1.29
TRIM13-206ENST00000457662 RIC1Q4ADV7 1423 aa23.09■■□□□ 1.29
TRIM13-206ENST00000457662 ABCC12Q96J65 1359 aa23.08■■□□□ 1.29
TRIM13-206ENST00000457662 SRGNP10124 158 aa23.08■■□□□ 1.29
TRIM13-206ENST00000457662 ANKRD31Q8N7Z5 1873 aa23.08■■□□□ 1.28
TRIM13-206ENST00000457662 N4BP2Q86UW6 1770 aaPredicted RBP23.07■■□□□ 1.28
TRIM13-206ENST00000457662 GCKRQ14397 625 aa23.07■■□□□ 1.28
TRIM13-206ENST00000457662 MASTLQ96GX5 879 aa23.07■■□□□ 1.28
TRIM13-206ENST00000457662 KIAA1551Q9HCM1 1747 aa23.06■■□□□ 1.28
TRIM13-206ENST00000457662 ALDH1L1O75891 902 aa23.06■■□□□ 1.28
TRIM13-206ENST00000457662 HCLS1P14317 486 aaPredicted RBP23.06■■□□□ 1.28
TRIM13-206ENST00000457662 GPR162Q16538 588 aa23.06■■□□□ 1.28
TRIM13-206ENST00000457662 RTL5Q5HYW3 569 aaPredicted RBP23.06■■□□□ 1.28
TRIM13-206ENST00000457662 SRCIN1Q9C0H9 1055 aa23.06■■□□□ 1.28
TRIM13-206ENST00000457662 IRS4O14654 1257 aaPredicted RBP23.05■■□□□ 1.28
TRIM13-206ENST00000457662 NPR1P16066 1061 aa23.05■■□□□ 1.28
TRIM13-206ENST00000457662 CRY2Q49AN0 593 aa23.05■■□□□ 1.28
TRIM13-206ENST00000457662 STYK1Q6J9G0 422 aa23.05■■□□□ 1.28
TRIM13-206ENST00000457662 ZNF622Q969S3 477 aaKnown RBP eCLIP23.05■■□□□ 1.28
TRIM13-206ENST00000457662 H7C1W4 665 aa23.05■■□□□ 1.28
TRIM13-206ENST00000457662 DALRD3Q5D0E6 543 aaKnown RBP23.05■■□□□ 1.28
TRIM13-206ENST00000457662 PELP1Q8IZL8 1130 aaKnown RBP23.05■■□□□ 1.28
TRIM13-206ENST00000457662 TTLL6Q8N841 843 aa23.05■■□□□ 1.28
TRIM13-206ENST00000457662 FRAT1Q92837 279 aaPredicted RBP23.04■■□□□ 1.28
TRIM13-206ENST00000457662 CNKSR1Q969H4 720 aa23.04■■□□□ 1.28
TRIM13-206ENST00000457662 JARID2Q92833 1246 aaPredicted RBP23.03■■□□□ 1.28
TRIM13-206ENST00000457662 RPGRQ92834 1020 aaKnown RBP23.03■■□□□ 1.28
TRIM13-206ENST00000457662 RCAN3Q9UKA8 241 aa23.03■■□□□ 1.28
TRIM13-206ENST00000457662 WWC3Q9ULE0 1092 aa23.03■■□□□ 1.28
TRIM13-206ENST00000457662 BCS1LQ9Y276 419 aa23.03■■□□□ 1.28
TRIM13-206ENST00000457662 CDHR2Q9BYE9 1310 aa23.02■■□□□ 1.28
TRIM13-206ENST00000457662 ALDH1B1P30837 517 aa23.02■■□□□ 1.28
TRIM13-206ENST00000457662 HOXA10P31260 410 aaPredicted RBP23.02■■□□□ 1.28
TRIM13-206ENST00000457662 ATF7IPQ6VMQ6 1270 aa23.02■■□□□ 1.28
TRIM13-206ENST00000457662 PDE8AO60658 829 aa23.01■■□□□ 1.27
TRIM13-206ENST00000457662 CCT4P50991 539 aaKnown RBP23.01■■□□□ 1.27
TRIM13-206ENST00000457662 ZKSCAN2Q63HK3 967 aa23.01■■□□□ 1.27
TRIM13-206ENST00000457662 C3orf67Q6ZVT6 689 aa23.01■■□□□ 1.27
TRIM13-206ENST00000457662 UBE3BQ7Z3V4 1068 aa23.01■■□□□ 1.27
TRIM13-206ENST00000457662 C9orf78Q9NZ63 289 aaPredicted RBP23.01■■□□□ 1.27
TRIM13-206ENST00000457662 GRIN3BO60391 1043 aa23■■□□□ 1.27
TRIM13-206ENST00000457662 YBX3P16989 372 aaKnown RBP eCLIP23■■□□□ 1.27
TRIM13-206ENST00000457662 SF3B3Q15393 1217 aaKnown RBP23■■□□□ 1.27
TRIM13-206ENST00000457662 RBM17Q96I25 401 aaKnown RBP23■■□□□ 1.27
TRIM13-206ENST00000457662 GRM8O00222 908 aa22.99■■□□□ 1.27
TRIM13-206ENST00000457662 CRAMP1Q96RY5 1269 aa22.99■■□□□ 1.27
TRIM13-206ENST00000457662 BRCA1P38398 1863 aaKnown RBP22.99■■□□□ 1.27
TRIM13-206ENST00000457662 DLEC1Q9Y238 1755 aa22.99■■□□□ 1.27
TRIM13-206ENST00000457662 TRIM27P14373 513 aa22.98■■□□□ 1.27
TRIM13-206ENST00000457662 CASP7P55210 303 aa22.98■■□□□ 1.27
TRIM13-206ENST00000457662 TNRC6CQ9HCJ0 1690 aaKnown RBP22.98■■□□□ 1.27
TRIM13-206ENST00000457662 COL11A2P13942 1736 aaPredicted RBP22.97■■□□□ 1.27
TRIM13-206ENST00000457662 DDX46Q7L014 1031 aaKnown RBP22.97■■□□□ 1.27
TRIM13-206ENST00000457662 PLA2G12BQ9BX93 195 aa22.97■■□□□ 1.27
TRIM13-206ENST00000457662 INTS3Q68E01 1043 aaKnown RBP22.96■■□□□ 1.27
TRIM13-206ENST00000457662 PRPF40BQ6NWY9 871 aaKnown RBP22.96■■□□□ 1.27
TRIM13-206ENST00000457662 ABCC4O15439 1325 aa22.96■■□□□ 1.27
TRIM13-206ENST00000457662 DDX60Q8IY21 1712 aaKnown RBP22.96■■□□□ 1.27
TRIM13-206ENST00000457662 CCDC152Q4G0S7 254 aa22.95■■□□□ 1.26
TRIM13-206ENST00000457662 UTYO14607 1347 aa22.95■■□□□ 1.26
TRIM13-206ENST00000457662 CTSWP56202 376 aa22.94■■□□□ 1.26
TRIM13-206ENST00000457662 USP44Q9H0E7 712 aa22.94■■□□□ 1.26
TRIM13-206ENST00000457662 BBOX1O75936 387 aa22.93■■□□□ 1.26
TRIM13-206ENST00000457662 TTLL11Q8NHH1 800 aa22.93■■□□□ 1.26
TRIM13-206ENST00000457662 CLUAP1Q96AJ1 413 aa22.93■■□□□ 1.26
TRIM13-206ENST00000457662 NBPF7P0C2Y1 421 aaPredicted RBP22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms