RNA–Protein interactions for RNA: ENST00000457288.2

CBWD6-204, Transcript of COBW domain containing 6, human

TSL 3

Gene CBWD6, Length 449 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD6-204	ENST00000457288	PARP10	Q53GL7	1025 aa		11.3	□□□□□ -0.6
CBWD6-204	ENST00000457288	CFAP44	Q96MT7	982 aa		11.3	□□□□□ -0.6
CBWD6-204	ENST00000457288	RRAGC	Q9HB90	399 aa		11.3	□□□□□ -0.6
CBWD6-204	ENST00000457288	DDX21	Q9NR30	783 aa	Known RBP eCLIP	11.3	□□□□□ -0.6
CBWD6-204	ENST00000457288	ZNF219	Q9P2Y4	722 aa	Predicted RBP	11.3	□□□□□ -0.6
CBWD6-204	ENST00000457288	COL4A5	P29400	1685 aa		11.3	□□□□□ -0.6
CBWD6-204	ENST00000457288	GPT	P24298	496 aa		11.29	□□□□□ -0.6
CBWD6-204	ENST00000457288	ALDH1B1	P30837	517 aa		11.29	□□□□□ -0.6
CBWD6-204	ENST00000457288	FKBP4	Q02790	459 aa	Known RBP eCLIP	11.29	□□□□□ -0.6
CBWD6-204	ENST00000457288	VEGFA	P15692	232 aa	Predicted RBP	11.28	□□□□□ -0.6
CBWD6-204	ENST00000457288	GTF2E1	P29083	439 aa	Predicted RBP	11.28	□□□□□ -0.6
CBWD6-204	ENST00000457288	OLFM4	Q6UX06	510 aa		11.28	□□□□□ -0.6
CBWD6-204	ENST00000457288	COPS6	Q7L5N1	327 aa		11.28	□□□□□ -0.6
CBWD6-204	ENST00000457288	PPP1R42	Q7Z4L9	355 aa		11.28	□□□□□ -0.6
CBWD6-204	ENST00000457288	C16orf71	Q8IYS4	520 aa	Predicted RBP	11.28	□□□□□ -0.6
CBWD6-204	ENST00000457288	RTKN2	Q8IZC4	609 aa		11.28	□□□□□ -0.6
CBWD6-204	ENST00000457288	SMC1B	Q8NDV3	1235 aa		11.28	□□□□□ -0.6
CBWD6-204	ENST00000457288	XAGE3	Q8WTP9	111 aa		11.28	□□□□□ -0.6
CBWD6-204	ENST00000457288	MBIP	Q9NS73	344 aa		11.28	□□□□□ -0.6
CBWD6-204	ENST00000457288	CHPF2	Q9P2E5	772 aa		11.28	□□□□□ -0.6
CBWD6-204	ENST00000457288	APAF1	O14727	1248 aa		11.27	□□□□□ -0.61
CBWD6-204	ENST00000457288	HSP90AB3P	Q58FF7	597 aa		11.27	□□□□□ -0.61
CBWD6-204	ENST00000457288	SLC10A5	Q5PT55	438 aa		11.27	□□□□□ -0.61
CBWD6-204	ENST00000457288	HDGFL1	Q5TGJ6	251 aa		11.27	□□□□□ -0.61
CBWD6-204	ENST00000457288	DPY19L2	Q6NUT2	758 aa		11.27	□□□□□ -0.61
CBWD6-204	ENST00000457288	C3orf67	Q6ZVT6	689 aa		11.27	□□□□□ -0.61
CBWD6-204	ENST00000457288	DNAJC5G	Q8N7S2	189 aa		11.27	□□□□□ -0.61
CBWD6-204	ENST00000457288	L3MBTL3	Q96JM7	780 aa	Predicted RBP	11.27	□□□□□ -0.61
CBWD6-204	ENST00000457288	CRAMP1	Q96RY5	1269 aa		11.27	□□□□□ -0.61
CBWD6-204	ENST00000457288	PSMD1	Q99460	953 aa		11.27	□□□□□ -0.61
CBWD6-204	ENST00000457288	IFT57	Q9NWB7	429 aa		11.27	□□□□□ -0.61
CBWD6-204	ENST00000457288	TAF1	P21675	1872 aa		11.27	□□□□□ -0.61
CBWD6-204	ENST00000457288	LTBP1	Q14766	1721 aa		11.26	□□□□□ -0.61
CBWD6-204	ENST00000457288	DUOX1	Q9NRD9	1551 aa		11.26	□□□□□ -0.61
CBWD6-204	ENST00000457288	ZEB1	P37275	1124 aa	Predicted RBP	11.26	□□□□□ -0.61
CBWD6-204	ENST00000457288	DUSP27	Q5VZP5	1158 aa		11.26	□□□□□ -0.61
CBWD6-204	ENST00000457288	CC2D2B	Q6DHV5	1058 aa		11.26	□□□□□ -0.61
CBWD6-204	ENST00000457288	NLRP10	Q86W26	655 aa		11.26	□□□□□ -0.61
CBWD6-204	ENST00000457288	NECTIN2	Q92692	538 aa		11.26	□□□□□ -0.61
CBWD6-204	ENST00000457288	UTP14A	Q9BVJ6	771 aa	Known RBP	11.26	□□□□□ -0.61
CBWD6-204	ENST00000457288	CEP350	Q5VT06	3117 aa		11.25	□□□□□ -0.61
CBWD6-204	ENST00000457288	COL4A1	P02462	1669 aa		11.25	□□□□□ -0.61
CBWD6-204	ENST00000457288	IARS	P41252	1262 aa	Known RBP	11.25	□□□□□ -0.61
CBWD6-204	ENST00000457288	TCIRG1	Q13488	830 aa		11.25	□□□□□ -0.61
CBWD6-204	ENST00000457288	GRIPAP1	Q4V328	841 aa		11.25	□□□□□ -0.61
CBWD6-204	ENST00000457288	CCDC184	Q52MB2	194 aa		11.25	□□□□□ -0.61
CBWD6-204	ENST00000457288	PLBD2	Q8NHP8	589 aa		11.25	□□□□□ -0.61
CBWD6-204	ENST00000457288	RPGR	Q92834	1020 aa	Known RBP	11.25	□□□□□ -0.61
CBWD6-204	ENST00000457288	ZNF277	Q9NRM2	450 aa	Predicted RBP	11.25	□□□□□ -0.61
CBWD6-204	ENST00000457288	DBF4	Q9UBU7	674 aa	Predicted RBP	11.25	□□□□□ -0.61
CBWD6-204	ENST00000457288	LAS1L	Q9Y4W2	734 aa	Known RBP	11.25	□□□□□ -0.61
CBWD6-204	ENST00000457288	ZNF541	Q9H0D2	1346 aa		11.25	□□□□□ -0.61
CBWD6-204	ENST00000457288	FZD9	O00144	591 aa		11.24	□□□□□ -0.61
CBWD6-204	ENST00000457288	PPEF1	O14829	653 aa	Predicted RBP	11.24	□□□□□ -0.61
CBWD6-204	ENST00000457288	DDN	O94850	711 aa	Predicted RBP	11.24	□□□□□ -0.61
CBWD6-204	ENST00000457288	GNAI1	P63096	354 aa		11.24	□□□□□ -0.61
CBWD6-204	ENST00000457288	CALD1	Q05682	793 aa	Known RBP	11.24	□□□□□ -0.61
CBWD6-204	ENST00000457288	AIMP1	Q12904	312 aa	Known RBP	11.24	□□□□□ -0.61
CBWD6-204	ENST00000457288	SLC51A	Q86UW1	340 aa		11.24	□□□□□ -0.61
CBWD6-204	ENST00000457288	RBM17	Q96I25	401 aa	Known RBP	11.24	□□□□□ -0.61
CBWD6-204	ENST00000457288	ISCA1	Q9BUE6	129 aa		11.24	□□□□□ -0.61
CBWD6-204	ENST00000457288	ABCC4	O15439	1325 aa		11.24	□□□□□ -0.61
CBWD6-204	ENST00000457288	CACNA1F	O60840	1977 aa		11.23	□□□□□ -0.61
CBWD6-204	ENST00000457288	CCDC27	Q2M243	656 aa		11.23	□□□□□ -0.61
CBWD6-204	ENST00000457288	SYNE4	Q8N205	404 aa		11.23	□□□□□ -0.61
CBWD6-204	ENST00000457288	NLRP3	Q96P20	1036 aa		11.23	□□□□□ -0.61
CBWD6-204	ENST00000457288	HYPK	Q9NX55	129 aa		11.23	□□□□□ -0.61
CBWD6-204	ENST00000457288	SH3TC1	Q8TE82	1336 aa		11.23	□□□□□ -0.61
CBWD6-204	ENST00000457288	IQCA1L	A6NCM1	817 aa		11.22	□□□□□ -0.61
CBWD6-204	ENST00000457288	MYH3	P11055	1940 aa		11.22	□□□□□ -0.61
CBWD6-204	ENST00000457288	ANKRD13D	Q6ZTN6	518 aa		11.22	□□□□□ -0.61
CBWD6-204	ENST00000457288	KLRG1	Q96E93	195 aa		11.22	□□□□□ -0.61
CBWD6-204	ENST00000457288	ATP6V0A2	Q9Y487	856 aa		11.22	□□□□□ -0.61
CBWD6-204	ENST00000457288	POTEI	P0CG38	1075 aa		11.21	□□□□□ -0.61
CBWD6-204	ENST00000457288	POTEJ	P0CG39	1038 aa		11.21	□□□□□ -0.61
CBWD6-204	ENST00000457288	HTRA3	P83110	453 aa		11.21	□□□□□ -0.61
CBWD6-204	ENST00000457288	TRIM28	Q13263	835 aa	Known RBP	11.21	□□□□□ -0.61
CBWD6-204	ENST00000457288	JMY	Q8N9B5	988 aa		11.21	□□□□□ -0.61
CBWD6-204	ENST00000457288	RTFDC1	Q9BY42	306 aa	Predicted RBP	11.21	□□□□□ -0.61
CBWD6-204	ENST00000457288	RNF39	Q9H2S5	420 aa		11.21	□□□□□ -0.61
CBWD6-204	ENST00000457288	TAF1D	Q9H5J8	278 aa	Predicted RBP	11.21	□□□□□ -0.61
CBWD6-204	ENST00000457288	TRMT112	Q9UI30	125 aa	Known RBP	11.21	□□□□□ -0.61
CBWD6-204	ENST00000457288	HCLS1	P14317	486 aa	Predicted RBP	11.2	□□□□□ -0.62
CBWD6-204	ENST00000457288	GPC2	Q8N158	579 aa		11.2	□□□□□ -0.62
CBWD6-204	ENST00000457288	C8orf58	Q8NAV2	365 aa		11.2	□□□□□ -0.62
CBWD6-204	ENST00000457288	IL16	Q14005	1332 aa		11.19	□□□□□ -0.62
CBWD6-204	ENST00000457288	PASK	Q96RG2	1323 aa		11.19	□□□□□ -0.62
CBWD6-204	ENST00000457288	ZNF316	A6NFI3	1004 aa	Predicted RBP	11.19	□□□□□ -0.62
CBWD6-204	ENST00000457288	BBOX1	O75936	387 aa		11.19	□□□□□ -0.62
CBWD6-204	ENST00000457288	GRAP	Q13588	217 aa		11.19	□□□□□ -0.62
CBWD6-204	ENST00000457288	SF3B3	Q15393	1217 aa	Known RBP	11.19	□□□□□ -0.62
CBWD6-204	ENST00000457288	CHADL	Q6NUI6	762 aa		11.19	□□□□□ -0.62
CBWD6-204	ENST00000457288	LDHD	Q86WU2	507 aa		11.19	□□□□□ -0.62
CBWD6-204	ENST00000457288	WWC1	Q8IX03	1113 aa		11.19	□□□□□ -0.62
CBWD6-204	ENST00000457288	SP8	Q8IXZ3	490 aa		11.19	□□□□□ -0.62
CBWD6-204	ENST00000457288	GRAPL	Q8TC17	118 aa	Predicted RBP	11.19	□□□□□ -0.62
CBWD6-204	ENST00000457288	JDP2	Q8WYK2	163 aa		11.19	□□□□□ -0.62
CBWD6-204	ENST00000457288	VPS33B	Q9H267	617 aa		11.19	□□□□□ -0.62
CBWD6-204	ENST00000457288	PHAX	Q9H814	394 aa	Known RBP	11.19	□□□□□ -0.62
CBWD6-204	ENST00000457288	PSME4	Q14997	1843 aa		11.19	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms