RNA–Protein interactions for RNA: ENST00000456563.1

FAM239A-203, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 3

Gene FAM239A, Length 793 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-203ENST00000456563 LRP5O75197 1615 aa22.65■■□□□ 1.22
FAM239A-203ENST00000456563 FAM177BA6PVY3 158 aa22.65■■□□□ 1.22
FAM239A-203ENST00000456563 ALDH1L1O75891 902 aa22.65■■□□□ 1.22
FAM239A-203ENST00000456563 SRCIN1Q9C0H9 1055 aa22.65■■□□□ 1.22
FAM239A-203ENST00000456563 ABCC4O15439 1325 aa22.64■■□□□ 1.22
FAM239A-203ENST00000456563 TRMT112Q9UI30 125 aaKnown RBP22.64■■□□□ 1.21
FAM239A-203ENST00000456563 CCT4P50991 539 aaKnown RBP22.63■■□□□ 1.21
FAM239A-203ENST00000456563 GCKRQ14397 625 aa22.63■■□□□ 1.21
FAM239A-203ENST00000456563 TNNQ9UQP3 1299 aa22.63■■□□□ 1.21
FAM239A-203ENST00000456563 AFDNP55196 1824 aaKnown RBP22.63■■□□□ 1.21
FAM239A-203ENST00000456563 SH3TC1Q8TE82 1336 aa22.62■■□□□ 1.21
FAM239A-203ENST00000456563 NPHP1O15259 732 aa22.62■■□□□ 1.21
FAM239A-203ENST00000456563 PCCAP05165 728 aaPredicted RBP22.62■■□□□ 1.21
FAM239A-203ENST00000456563 GTF2E1P29083 439 aaPredicted RBP22.62■■□□□ 1.21
FAM239A-203ENST00000456563 ST5P78524 1137 aa22.62■■□□□ 1.21
FAM239A-203ENST00000456563 NUTM1Q86Y26 1132 aa22.62■■□□□ 1.21
FAM239A-203ENST00000456563 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.62■■□□□ 1.21
FAM239A-203ENST00000456563 ZBTB38Q8NAP3 1195 aaPredicted RBP22.62■■□□□ 1.21
FAM239A-203ENST00000456563 PPP1R1BQ9UD71 204 aaPredicted RBP22.62■■□□□ 1.21
FAM239A-203ENST00000456563 C10orf71Q711Q0 1435 aa22.62■■□□□ 1.21
FAM239A-203ENST00000456563 ERFEQ4G0M1 354 aa22.61■■□□□ 1.21
FAM239A-203ENST00000456563 SLC10A5Q5PT55 438 aa22.61■■□□□ 1.21
FAM239A-203ENST00000456563 INTS3Q68E01 1043 aaKnown RBP22.61■■□□□ 1.21
FAM239A-203ENST00000456563 CD2APQ9Y5K6 639 aa22.61■■□□□ 1.21
FAM239A-203ENST00000456563 H7C1W4 665 aa22.6■■□□□ 1.21
FAM239A-203ENST00000456563 MS4A1P11836 297 aa22.6■■□□□ 1.21
FAM239A-203ENST00000456563 DZIP1LQ8IYY4 767 aaKnown RBP22.6■■□□□ 1.21
FAM239A-203ENST00000456563 CLUAP1Q96AJ1 413 aa22.6■■□□□ 1.21
FAM239A-203ENST00000456563 FAM89AQ96GI7 184 aa22.6■■□□□ 1.21
FAM239A-203ENST00000456563 BRIP1Q9BX63 1249 aa22.6■■□□□ 1.21
FAM239A-203ENST00000456563 RIC1Q4ADV7 1423 aa22.59■■□□□ 1.21
FAM239A-203ENST00000456563 PLIN1O60240 522 aa22.59■■□□□ 1.21
FAM239A-203ENST00000456563 CCDC24Q8N4L8 307 aa22.59■■□□□ 1.21
FAM239A-203ENST00000456563 ABCC12Q96J65 1359 aa22.59■■□□□ 1.21
FAM239A-203ENST00000456563 FTSJ3Q8IY81 847 aaKnown RBP22.58■■□□□ 1.21
FAM239A-203ENST00000456563 SYNE4Q8N205 404 aa22.58■■□□□ 1.21
FAM239A-203ENST00000456563 CDHR2Q9BYE9 1310 aa22.57■■□□□ 1.2
FAM239A-203ENST00000456563 GRM8O00222 908 aa22.57■■□□□ 1.2
FAM239A-203ENST00000456563 RLBP1P12271 317 aa22.57■■□□□ 1.2
FAM239A-203ENST00000456563 CASP7P55210 303 aa22.57■■□□□ 1.2
FAM239A-203ENST00000456563 TMEM57Q8N5G2 664 aa22.57■■□□□ 1.2
FAM239A-203ENST00000456563 KLRG2A4D1S0 409 aaPredicted RBP22.56■■□□□ 1.2
FAM239A-203ENST00000456563 IRS4O14654 1257 aaPredicted RBP22.56■■□□□ 1.2
FAM239A-203ENST00000456563 HSP90B1P14625 803 aaKnown RBP22.56■■□□□ 1.2
FAM239A-203ENST00000456563 PDE6BP35913 854 aa22.56■■□□□ 1.2
FAM239A-203ENST00000456563 RRP1P56182 461 aaKnown RBP22.56■■□□□ 1.2
FAM239A-203ENST00000456563 TGFB2P61812 414 aa22.56■■□□□ 1.2
FAM239A-203ENST00000456563 RTL5Q5HYW3 569 aaPredicted RBP22.56■■□□□ 1.2
FAM239A-203ENST00000456563 FHDC1Q9C0D6 1143 aaPredicted RBP22.56■■□□□ 1.2
FAM239A-203ENST00000456563 C9orf78Q9NZ63 289 aaPredicted RBP22.56■■□□□ 1.2
FAM239A-203ENST00000456563 KIF13BQ9NQT8 1826 aa22.56■■□□□ 1.2
FAM239A-203ENST00000456563 UTYO14607 1347 aa22.56■■□□□ 1.2
FAM239A-203ENST00000456563 N4BP2Q86UW6 1770 aaPredicted RBP22.55■■□□□ 1.2
FAM239A-203ENST00000456563 PDE3AQ14432 1141 aa22.55■■□□□ 1.2
FAM239A-203ENST00000456563 UBE3BQ7Z3V4 1068 aa22.55■■□□□ 1.2
FAM239A-203ENST00000456563 JARID2Q92833 1246 aaPredicted RBP22.55■■□□□ 1.2
FAM239A-203ENST00000456563 USP44Q9H0E7 712 aa22.55■■□□□ 1.2
FAM239A-203ENST00000456563 PDZRN3Q9UPQ7 1066 aa22.55■■□□□ 1.2
FAM239A-203ENST00000456563 HCLS1P14317 486 aaPredicted RBP22.54■■□□□ 1.2
FAM239A-203ENST00000456563 KLHL34Q8N239 644 aa22.54■■□□□ 1.2
FAM239A-203ENST00000456563 PANK1Q8TE04 598 aa22.54■■□□□ 1.2
FAM239A-203ENST00000456563 NLRP3Q96P20 1036 aa22.53■■□□□ 1.2
FAM239A-203ENST00000456563 SYT17Q9BSW7 474 aa22.53■■□□□ 1.2
FAM239A-203ENST00000456563 PLA2G12BQ9BX93 195 aa22.53■■□□□ 1.2
FAM239A-203ENST00000456563 ANKRD31Q8N7Z5 1873 aa22.52■■□□□ 1.2
FAM239A-203ENST00000456563 PDE8AO60658 829 aa22.52■■□□□ 1.2
FAM239A-203ENST00000456563 NBPF7P0C2Y1 421 aaPredicted RBP22.52■■□□□ 1.2
FAM239A-203ENST00000456563 CRY2Q49AN0 593 aa22.51■■□□□ 1.19
FAM239A-203ENST00000456563 H0YIN7 160 aa22.5■■□□□ 1.19
FAM239A-203ENST00000456563 SF3B3Q15393 1217 aaKnown RBP22.5■■□□□ 1.19
FAM239A-203ENST00000456563 C20orf194Q5TEA3 1177 aa22.5■■□□□ 1.19
FAM239A-203ENST00000456563 C3orf67Q6ZVT6 689 aa22.5■■□□□ 1.19
FAM239A-203ENST00000456563 C2CD5Q86YS7 1000 aa22.5■■□□□ 1.19
FAM239A-203ENST00000456563 ITPRIPQ8IWB1 547 aa22.5■■□□□ 1.19
FAM239A-203ENST00000456563 SUPT16HQ9Y5B9 1047 aaKnown RBP22.5■■□□□ 1.19
FAM239A-203ENST00000456563 SRGNP10124 158 aa22.49■■□□□ 1.19
FAM239A-203ENST00000456563 DPEP1P16444 411 aa22.49■■□□□ 1.19
FAM239A-203ENST00000456563 NLGN2Q8NFZ4 835 aa22.49■■□□□ 1.19
FAM239A-203ENST00000456563 MEIS3Q99687 375 aa22.49■■□□□ 1.19
FAM239A-203ENST00000456563 TNRC6CQ9HCJ0 1690 aaKnown RBP22.49■■□□□ 1.19
FAM239A-203ENST00000456563 DDX60Q8IY21 1712 aaKnown RBP22.48■■□□□ 1.19
FAM239A-203ENST00000456563 A0A0G2JLW4 131 aa22.48■■□□□ 1.19
FAM239A-203ENST00000456563 GNAI3P08754 354 aa22.48■■□□□ 1.19
FAM239A-203ENST00000456563 KCNA3P22001 575 aa22.48■■□□□ 1.19
FAM239A-203ENST00000456563 CHRNA5P30532 468 aa22.48■■□□□ 1.19
FAM239A-203ENST00000456563 MVPQ14764 893 aaKnown RBP22.48■■□□□ 1.19
FAM239A-203ENST00000456563 LAMB2P55268 1798 aa22.48■■□□□ 1.19
FAM239A-203ENST00000456563 ZBTB7BO15156 539 aaPredicted RBP22.47■■□□□ 1.19
FAM239A-203ENST00000456563 CENPBP07199 599 aaPredicted RBP22.47■■□□□ 1.19
FAM239A-203ENST00000456563 UBTFL1P0CB47 393 aaPredicted RBP22.47■■□□□ 1.19
FAM239A-203ENST00000456563 NPR1P16066 1061 aa22.47■■□□□ 1.19
FAM239A-203ENST00000456563 CTSWP56202 376 aa22.47■■□□□ 1.19
FAM239A-203ENST00000456563 MASTLQ96GX5 879 aa22.47■■□□□ 1.19
FAM239A-203ENST00000456563 KAZALD1Q96I82 304 aa22.47■■□□□ 1.19
FAM239A-203ENST00000456563 SUCLG2Q96I99 432 aa22.47■■□□□ 1.19
FAM239A-203ENST00000456563 HDAC5Q9UQL6 1122 aa22.47■■□□□ 1.19
FAM239A-203ENST00000456563 COG6Q9Y2V7 657 aa22.47■■□□□ 1.19
FAM239A-203ENST00000456563 KIAA1551Q9HCM1 1747 aa22.47■■□□□ 1.19
FAM239A-203ENST00000456563 CSF1RP07333 972 aa22.46■■□□□ 1.19
FAM239A-203ENST00000456563 HOXA10P31260 410 aaPredicted RBP22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms