RNA–Protein interactions for RNA: ENST00000456517.2

HIPK3-203, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HIPK3, Length 7,399 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-203ENST00000456517 TSPY3P0CV98 308 aa16.71■□□□□ 0.27
HIPK3-203ENST00000456517 TSPY8P0CW00 308 aa16.71■□□□□ 0.27
HIPK3-203ENST00000456517 FAM114A1Q8IWE2 563 aa16.71■□□□□ 0.27
HIPK3-203ENST00000456517 METAP2P50579 478 aaKnown RBP eCLIP16.71■□□□□ 0.27
HIPK3-203ENST00000456517 GIGYF2Q6Y7W6 1299 aaKnown RBP16.71■□□□□ 0.27
HIPK3-203ENST00000456517 CADPS2Q86UW7 1296 aa16.71■□□□□ 0.27
HIPK3-203ENST00000456517 PPM1EQ8WY54 764 aa16.71■□□□□ 0.27
HIPK3-203ENST00000456517 FLIIQ13045 1269 aa16.71■□□□□ 0.26
HIPK3-203ENST00000456517 FSD2A1L4K1 749 aa16.7■□□□□ 0.26
HIPK3-203ENST00000456517 PYM1Q9BRP8 204 aaKnown RBP16.7■□□□□ 0.26
HIPK3-203ENST00000456517 PANK2Q9BZ23 570 aa16.7■□□□□ 0.26
HIPK3-203ENST00000456517 LRRC27Q9C0I9 530 aa16.7■□□□□ 0.26
HIPK3-203ENST00000456517 MRPS9P82933 396 aaKnown RBP16.7■□□□□ 0.26
HIPK3-203ENST00000456517 CHRNA2Q15822 529 aa16.7■□□□□ 0.26
HIPK3-203ENST00000456517 CEP63Q96MT8 703 aa16.7■□□□□ 0.26
HIPK3-203ENST00000456517 NAA15Q9BXJ9 866 aaKnown RBP16.7■□□□□ 0.26
HIPK3-203ENST00000456517 SLC26A6Q9BXS9 759 aa16.7■□□□□ 0.26
HIPK3-203ENST00000456517 KIF18AQ8NI77 898 aa16.7■□□□□ 0.26
HIPK3-203ENST00000456517 FERP16591 822 aa16.7■□□□□ 0.26
HIPK3-203ENST00000456517 ERMNQ8TAM6 284 aa16.7■□□□□ 0.26
HIPK3-203ENST00000456517 ABCC11Q96J66 1382 aa16.69■□□□□ 0.26
HIPK3-203ENST00000456517 UBAP1LF5GYI3 381 aa16.69■□□□□ 0.26
HIPK3-203ENST00000456517 NCOA7Q8NI08 942 aa16.69■□□□□ 0.26
HIPK3-203ENST00000456517 ACSBG1Q96GR2 724 aa16.69■□□□□ 0.26
HIPK3-203ENST00000456517 LARP6Q9BRS8 491 aaKnown RBP16.69■□□□□ 0.26
HIPK3-203ENST00000456517 ECHDC1Q9NTX5 307 aa16.69■□□□□ 0.26
HIPK3-203ENST00000456517 PTPRCP08575 1304 aa16.69■□□□□ 0.26
HIPK3-203ENST00000456517 TRAF1Q13077 416 aa16.69■□□□□ 0.26
HIPK3-203ENST00000456517 PLS1Q14651 629 aa16.69■□□□□ 0.26
HIPK3-203ENST00000456517 ZGPATQ8N5A5 531 aaKnown RBP16.69■□□□□ 0.26
HIPK3-203ENST00000456517 LRRC45Q96CN5 670 aa16.69■□□□□ 0.26
HIPK3-203ENST00000456517 PHACTR2O75167 634 aa16.69■□□□□ 0.26
HIPK3-203ENST00000456517 CLIP2Q9UDT6 1046 aa16.69■□□□□ 0.26
HIPK3-203ENST00000456517 SNRPA1P09661 255 aaKnown RBP16.68■□□□□ 0.26
HIPK3-203ENST00000456517 EFCAB5A4FU69 1503 aa16.68■□□□□ 0.26
HIPK3-203ENST00000456517 BIN1O00499 593 aa16.68■□□□□ 0.26
HIPK3-203ENST00000456517 UQCRFS1P1P0C7P4 283 aa16.68■□□□□ 0.26
HIPK3-203ENST00000456517 LRSAM1Q6UWE0 723 aa16.68■□□□□ 0.26
HIPK3-203ENST00000456517 ANKRD24Q8TF21 1146 aa16.68■□□□□ 0.26
HIPK3-203ENST00000456517 POLA1P09884 1462 aaPredicted RBP16.68■□□□□ 0.26
HIPK3-203ENST00000456517 PLEKHH1Q9ULM0 1364 aa16.68■□□□□ 0.26
HIPK3-203ENST00000456517 NBPF7P0C2Y1 421 aaPredicted RBP16.68■□□□□ 0.26
HIPK3-203ENST00000456517 ATP6V1AP38606 617 aa16.68■□□□□ 0.26
HIPK3-203ENST00000456517 TMX1Q9H3N1 280 aa16.68■□□□□ 0.26
HIPK3-203ENST00000456517 TOM1O60784 492 aa16.67■□□□□ 0.26
HIPK3-203ENST00000456517 ORC3Q9UBD5 711 aaPredicted RBP16.67■□□□□ 0.26
HIPK3-203ENST00000456517 ERICH4A6NGS2 130 aa16.67■□□□□ 0.26
HIPK3-203ENST00000456517 USP37Q86T82 979 aa16.67■□□□□ 0.26
HIPK3-203ENST00000456517 IKBKGQ9Y6K9 419 aa16.67■□□□□ 0.26
HIPK3-203ENST00000456517 RAB11FIP4Q86YS3 637 aa16.67■□□□□ 0.26
HIPK3-203ENST00000456517 EXOC1Q9NV70 894 aa16.67■□□□□ 0.26
HIPK3-203ENST00000456517 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.67■□□□□ 0.26
HIPK3-203ENST00000456517 TTC21BQ7Z4L5 1316 aa16.67■□□□□ 0.26
HIPK3-203ENST00000456517 ECM2O94769 699 aaPredicted RBP16.67■□□□□ 0.26
HIPK3-203ENST00000456517 PPP4R3BQ5MIZ7 849 aa16.67■□□□□ 0.26
HIPK3-203ENST00000456517 TBC1D5Q92609 795 aa16.67■□□□□ 0.26
HIPK3-203ENST00000456517 JARID2Q92833 1246 aaPredicted RBP16.67■□□□□ 0.26
HIPK3-203ENST00000456517 KANK3Q6NY19 840 aa16.67■□□□□ 0.26
HIPK3-203ENST00000456517 NLRP3Q96P20 1036 aa16.67■□□□□ 0.26
HIPK3-203ENST00000456517 CCDC172P0C7W6 258 aa16.66■□□□□ 0.26
HIPK3-203ENST00000456517 ARL1P40616 181 aaPredicted RBP16.66■□□□□ 0.26
HIPK3-203ENST00000456517 PICALMQ13492 652 aa16.66■□□□□ 0.26
HIPK3-203ENST00000456517 NCBP1Q09161 790 aaKnown RBP16.66■□□□□ 0.26
HIPK3-203ENST00000456517 WTAPQ15007 396 aa16.66■□□□□ 0.26
HIPK3-203ENST00000456517 C8orf37Q96NL8 207 aa16.66■□□□□ 0.26
HIPK3-203ENST00000456517 WWC3Q9ULE0 1092 aa16.66■□□□□ 0.26
HIPK3-203ENST00000456517 PI4KAP2A4QPH2 592 aa16.66■□□□□ 0.26
HIPK3-203ENST00000456517 PI4KAP1Q8N8J0 262 aa16.66■□□□□ 0.26
HIPK3-203ENST00000456517 VEZTQ9HBM0 779 aa16.66■□□□□ 0.26
HIPK3-203ENST00000456517 CYP7A1P22680 504 aa16.65■□□□□ 0.26
HIPK3-203ENST00000456517 RARSP54136 660 aaKnown RBP16.65■□□□□ 0.26
HIPK3-203ENST00000456517 IFIT1BQ5T764 474 aaKnown RBP16.65■□□□□ 0.26
HIPK3-203ENST00000456517 FBXO31Q5XUX0 539 aaPredicted RBP16.65■□□□□ 0.26
HIPK3-203ENST00000456517 TFIP11Q9UBB9 837 aaKnown RBP16.65■□□□□ 0.26
HIPK3-203ENST00000456517 MSH6P52701 1360 aa16.65■□□□□ 0.26
HIPK3-203ENST00000456517 PPP1R14CQ8TAE6 165 aa16.65■□□□□ 0.26
HIPK3-203ENST00000456517 B4DLN1 442 aa16.65■□□□□ 0.26
HIPK3-203ENST00000456517 POLD1P28340 1107 aa16.65■□□□□ 0.26
HIPK3-203ENST00000456517 MRPL12P52815 198 aaKnown RBP16.65■□□□□ 0.26
HIPK3-203ENST00000456517 CCDC141Q6ZP82 1450 aa16.65■□□□□ 0.26
HIPK3-203ENST00000456517 NEK1Q96PY6 1258 aa16.65■□□□□ 0.26
HIPK3-203ENST00000456517 ISM2Q6H9L7 571 aa16.65■□□□□ 0.26
HIPK3-203ENST00000456517 ANKRD13DQ6ZTN6 518 aa16.65■□□□□ 0.26
HIPK3-203ENST00000456517 TCHPQ9BT92 498 aa16.65■□□□□ 0.26
HIPK3-203ENST00000456517 CCDC175P0C221 793 aa16.65■□□□□ 0.26
HIPK3-203ENST00000456517 NESP48681 1621 aa16.64■□□□□ 0.25
HIPK3-203ENST00000456517 GJB2P29033 226 aa16.64■□□□□ 0.25
HIPK3-203ENST00000456517 RBM26Q5T8P6 1007 aaKnown RBP16.64■□□□□ 0.25
HIPK3-203ENST00000456517 TRIM47Q96LD4 638 aa16.64■□□□□ 0.25
HIPK3-203ENST00000456517 IQSEC3Q9UPP2 1182 aaPredicted RBP16.64■□□□□ 0.25
HIPK3-203ENST00000456517 PPFIA3O75145 1194 aa16.64■□□□□ 0.25
HIPK3-203ENST00000456517 MCM5P33992 734 aa16.64■□□□□ 0.25
HIPK3-203ENST00000456517 PDCL2Q8N4E4 241 aa16.64■□□□□ 0.25
HIPK3-203ENST00000456517 TRMT1Q9NXH9 659 aaKnown RBP16.64■□□□□ 0.25
HIPK3-203ENST00000456517 PLVAPQ9BX97 442 aa16.63■□□□□ 0.25
HIPK3-203ENST00000456517 KRT13P13646 458 aa16.63■□□□□ 0.25
HIPK3-203ENST00000456517 HEATR3Q7Z4Q2 680 aa16.63■□□□□ 0.25
HIPK3-203ENST00000456517 ZCRB1Q8TBF4 217 aaKnown RBP16.63■□□□□ 0.25
HIPK3-203ENST00000456517 KRT23Q9C075 422 aa16.63■□□□□ 0.25
HIPK3-203ENST00000456517 DDX19AQ9NUU7 478 aaKnown RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms