RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 LRRN4CLQ8ND94 238 aa12.17□□□□□ -0.46
CLIP4-208ENST00000456385 DDX11Q96FC9 970 aa12.17□□□□□ -0.46
CLIP4-208ENST00000456385 RBM8AQ9Y5S9 174 aaKnown RBP12.17□□□□□ -0.46
CLIP4-208ENST00000456385 CCDC171Q6TFL3 1326 aa12.17□□□□□ -0.46
CLIP4-208ENST00000456385 DLC1Q96QB1 1528 aa12.17□□□□□ -0.46
CLIP4-208ENST00000456385 CCDC69A6NI79 296 aa12.16□□□□□ -0.46
CLIP4-208ENST00000456385 GOLGA6L19H0YKK7 550 aa12.16□□□□□ -0.46
CLIP4-208ENST00000456385 ZKSCAN1P17029 563 aaPredicted RBP12.16□□□□□ -0.46
CLIP4-208ENST00000456385 CDC25BP30305 580 aa12.16□□□□□ -0.46
CLIP4-208ENST00000456385 CCZ1BP86790 482 aa12.16□□□□□ -0.46
CLIP4-208ENST00000456385 CCZ1P86791 482 aaPredicted RBP12.16□□□□□ -0.46
CLIP4-208ENST00000456385 CREB3L3Q68CJ9 461 aa12.16□□□□□ -0.46
CLIP4-208ENST00000456385 ERO1AQ96HE7 468 aa12.16□□□□□ -0.46
CLIP4-208ENST00000456385 FAM227BQ96M60 508 aa12.16□□□□□ -0.46
CLIP4-208ENST00000456385 TRERF1Q96PN7 1200 aa12.16□□□□□ -0.46
CLIP4-208ENST00000456385 XRN1Q8IZH2 1706 aaKnown RBP12.16□□□□□ -0.46
CLIP4-208ENST00000456385 NRKQ7Z2Y5 1582 aa12.16□□□□□ -0.46
CLIP4-208ENST00000456385 NUTM2FA1L443 756 aa12.16□□□□□ -0.46
CLIP4-208ENST00000456385 CEBPZQ03701 1054 aaKnown RBP12.16□□□□□ -0.46
CLIP4-208ENST00000456385 CCAR2Q8N163 923 aaKnown RBP12.16□□□□□ -0.46
CLIP4-208ENST00000456385 KCNB2Q92953 911 aa12.16□□□□□ -0.46
CLIP4-208ENST00000456385 GTF3C6Q969F1 213 aa12.16□□□□□ -0.46
CLIP4-208ENST00000456385 PPP6R1Q9UPN7 881 aa12.16□□□□□ -0.46
CLIP4-208ENST00000456385 RIMS1Q86UR5 1692 aaKnown RBP12.16□□□□□ -0.46
CLIP4-208ENST00000456385 PRR36Q9H6K5 1346 aa12.15□□□□□ -0.46
CLIP4-208ENST00000456385 GLRX3O76003 335 aaKnown RBP12.15□□□□□ -0.46
CLIP4-208ENST00000456385 SLU7O95391 586 aaKnown RBP12.15□□□□□ -0.46
CLIP4-208ENST00000456385 CAPN2P17655 700 aa12.15□□□□□ -0.46
CLIP4-208ENST00000456385 PDCP20941 246 aa12.15□□□□□ -0.46
CLIP4-208ENST00000456385 ERCC6LQ2NKX8 1250 aa12.15□□□□□ -0.46
CLIP4-208ENST00000456385 RUFY2Q8WXA3 655 aa12.15□□□□□ -0.46
CLIP4-208ENST00000456385 TTC21BQ7Z4L5 1316 aa12.15□□□□□ -0.46
CLIP4-208ENST00000456385 OS9Q13438 667 aaPredicted RBP12.15□□□□□ -0.46
CLIP4-208ENST00000456385 MRFAP1L1Q96HT8 127 aa12.15□□□□□ -0.46
CLIP4-208ENST00000456385 JAK2O60674 1132 aa12.14□□□□□ -0.47
CLIP4-208ENST00000456385 SARM1Q6SZW1 724 aa12.14□□□□□ -0.47
CLIP4-208ENST00000456385 ERCC4Q92889 916 aaPredicted RBP12.14□□□□□ -0.47
CLIP4-208ENST00000456385 FBXW7Q969H0 707 aa12.14□□□□□ -0.47
CLIP4-208ENST00000456385 MAP3K5Q99683 1374 aa12.14□□□□□ -0.47
CLIP4-208ENST00000456385 SLC27A2O14975 620 aa12.14□□□□□ -0.47
CLIP4-208ENST00000456385 TOB2Q14106 344 aaPredicted RBP12.14□□□□□ -0.47
CLIP4-208ENST00000456385 PLCD3Q8N3E9 789 aa12.14□□□□□ -0.47
CLIP4-208ENST00000456385 NOL10Q9BSC4 688 aaKnown RBP12.14□□□□□ -0.47
CLIP4-208ENST00000456385 ADCY9O60503 1353 aa12.13□□□□□ -0.47
CLIP4-208ENST00000456385 SLFNL1Q499Z3 407 aa12.13□□□□□ -0.47
CLIP4-208ENST00000456385 DHX40Q8IX18 779 aaKnown RBP12.13□□□□□ -0.47
CLIP4-208ENST00000456385 FTOQ9C0B1 505 aaKnown RBP eCLIP12.13□□□□□ -0.47
CLIP4-208ENST00000456385 FHOD1Q9Y613 1164 aa12.13□□□□□ -0.47
CLIP4-208ENST00000456385 METP08581 1390 aa12.13□□□□□ -0.47
CLIP4-208ENST00000456385 PEAK1Q9H792 1746 aa12.13□□□□□ -0.47
CLIP4-208ENST00000456385 TTC41PQ6P2S7 1318 aa12.13□□□□□ -0.47
CLIP4-208ENST00000456385 C3P01024 1663 aa12.13□□□□□ -0.47
CLIP4-208ENST00000456385 BECN2A8MW95 431 aa12.12□□□□□ -0.47
CLIP4-208ENST00000456385 NEMFO60524 1076 aa12.12□□□□□ -0.47
CLIP4-208ENST00000456385 MAP4K1Q92918 833 aa12.12□□□□□ -0.47
CLIP4-208ENST00000456385 CALCOCO1Q9P1Z2 691 aa12.12□□□□□ -0.47
CLIP4-208ENST00000456385 USP42Q9H9J4 1324 aaKnown RBP12.12□□□□□ -0.47
CLIP4-208ENST00000456385 TULP2O00295 520 aa12.12□□□□□ -0.47
CLIP4-208ENST00000456385 H2AFXP16104 143 aaPredicted RBP12.12□□□□□ -0.47
CLIP4-208ENST00000456385 CYP2C19P33261 490 aa12.12□□□□□ -0.47
CLIP4-208ENST00000456385 HNRNPH2P55795 449 aaKnown RBP12.12□□□□□ -0.47
CLIP4-208ENST00000456385 NMIQ13287 307 aaPredicted RBP12.12□□□□□ -0.47
CLIP4-208ENST00000456385 TAF7Q15545 349 aaPredicted RBP12.12□□□□□ -0.47
CLIP4-208ENST00000456385 HDGFL1Q5TGJ6 251 aa12.12□□□□□ -0.47
CLIP4-208ENST00000456385 BLOC1S2Q6QNY1 142 aa12.12□□□□□ -0.47
CLIP4-208ENST00000456385 EYA1Q99502 592 aa12.12□□□□□ -0.47
CLIP4-208ENST00000456385 ECHDC1Q9NTX5 307 aa12.12□□□□□ -0.47
CLIP4-208ENST00000456385 PA2G4Q9UQ80 394 aaKnown RBP12.12□□□□□ -0.47
CLIP4-208ENST00000456385 MON2Q7Z3U7 1717 aa12.12□□□□□ -0.47
CLIP4-208ENST00000456385 DIP2CQ9Y2E4 1556 aa12.11□□□□□ -0.47
CLIP4-208ENST00000456385 EIF2S2P20042 333 aaKnown RBP12.11□□□□□ -0.47
CLIP4-208ENST00000456385 CLCN6P51797 869 aa12.11□□□□□ -0.47
CLIP4-208ENST00000456385 RESTQ13127 1097 aa12.11□□□□□ -0.47
CLIP4-208ENST00000456385 E4F1Q66K89 784 aaPredicted RBP12.11□□□□□ -0.47
CLIP4-208ENST00000456385 SYT10Q6XYQ8 523 aa12.11□□□□□ -0.47
CLIP4-208ENST00000456385 CLASRPQ8N2M8 674 aaKnown RBP12.11□□□□□ -0.47
CLIP4-208ENST00000456385 GOLPH3LQ9H4A5 285 aa12.11□□□□□ -0.47
CLIP4-208ENST00000456385 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.11□□□□□ -0.47
CLIP4-208ENST00000456385 RIMBP3CA6NJZ7 1639 aa12.11□□□□□ -0.47
CLIP4-208ENST00000456385 RIMBP3BA6NNM3 1639 aa12.11□□□□□ -0.47
CLIP4-208ENST00000456385 RIMBP3Q9UFD9 1639 aa12.11□□□□□ -0.47
CLIP4-208ENST00000456385 RPS6KB1P23443 525 aa12.11□□□□□ -0.47
CLIP4-208ENST00000456385 PSMA5P28066 241 aa12.11□□□□□ -0.47
CLIP4-208ENST00000456385 BMS1Q14692 1282 aaKnown RBP12.11□□□□□ -0.47
CLIP4-208ENST00000456385 IL17REQ8NFR9 667 aa12.11□□□□□ -0.47
CLIP4-208ENST00000456385 BRF1Q92994 677 aa12.11□□□□□ -0.47
CLIP4-208ENST00000456385 FAM208AQ9UK61 1670 aaKnown RBP12.11□□□□□ -0.47
CLIP4-208ENST00000456385 ACEP12821 1306 aa12.11□□□□□ -0.47
CLIP4-208ENST00000456385 RGPD1P0DJD0 1748 aa12.1□□□□□ -0.47
CLIP4-208ENST00000456385 A0A0D9SFI3 127 aa12.1□□□□□ -0.47
CLIP4-208ENST00000456385 CAVIN2O95810 425 aa12.1□□□□□ -0.47
CLIP4-208ENST00000456385 IFIT2P09913 472 aaKnown RBP12.1□□□□□ -0.47
CLIP4-208ENST00000456385 PLA2G4AP47712 749 aa12.1□□□□□ -0.47
CLIP4-208ENST00000456385 FOSBP53539 338 aa12.1□□□□□ -0.47
CLIP4-208ENST00000456385 SNW1Q13573 536 aaKnown RBP12.1□□□□□ -0.47
CLIP4-208ENST00000456385 STX1AQ16623 288 aa12.1□□□□□ -0.47
CLIP4-208ENST00000456385 NBPF11Q86T75 865 aa12.1□□□□□ -0.47
CLIP4-208ENST00000456385 PI4KAP2A4QPH2 592 aa12.1□□□□□ -0.47
CLIP4-208ENST00000456385 ANXA1P04083 346 aa12.1□□□□□ -0.47
CLIP4-208ENST00000456385 PNMA6AP0CW24 399 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms