RNA–Protein interactions for RNA: ENST00000455853.1

LINC00473-202, long intergenic non-protein coding RNA 473, humanhuman

TSL 1 (best)

Gene LINC00473, Length 1,822 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473-202ENST00000455853 IL17REQ8NFR9 667 aa15.33■□□□□ 0.04
LINC00473-202ENST00000455853 LMO7Q8WWI1 1683 aa15.33■□□□□ 0.04
LINC00473-202ENST00000455853 CASTP20810 708 aaKnown RBP15.32■□□□□ 0.04
LINC00473-202ENST00000455853 PSMA5P28066 241 aa15.32■□□□□ 0.04
LINC00473-202ENST00000455853 GJB2P29033 226 aa15.32■□□□□ 0.04
LINC00473-202ENST00000455853 DNAAF4Q8WXU2 420 aa15.32■□□□□ 0.04
LINC00473-202ENST00000455853 IL25Q9H293 177 aa15.32■□□□□ 0.04
LINC00473-202ENST00000455853 ALDH8A1Q9H2A2 487 aaPredicted RBP15.32■□□□□ 0.04
LINC00473-202ENST00000455853 MTMR6Q9Y217 621 aa15.32■□□□□ 0.04
LINC00473-202ENST00000455853 ALDH1L1O75891 902 aa15.31■□□□□ 0.04
LINC00473-202ENST00000455853 FNBP4Q8N3X1 1017 aaPredicted RBP15.31■□□□□ 0.04
LINC00473-202ENST00000455853 EVI5LQ96CN4 794 aa15.31■□□□□ 0.04
LINC00473-202ENST00000455853 USP21Q9UK80 565 aa15.31■□□□□ 0.04
LINC00473-202ENST00000455853 KIF3AQ9Y496 699 aa15.31■□□□□ 0.04
LINC00473-202ENST00000455853 FIBPO43427 364 aa15.31■□□□□ 0.04
LINC00473-202ENST00000455853 KRT85P78386 507 aa15.31■□□□□ 0.04
LINC00473-202ENST00000455853 BEND3Q5T5X7 828 aa15.31■□□□□ 0.04
LINC00473-202ENST00000455853 RASEFQ8IZ41 740 aa15.31■□□□□ 0.04
LINC00473-202ENST00000455853 ECHDC1Q9NTX5 307 aa15.31■□□□□ 0.04
LINC00473-202ENST00000455853 OVOS2A0A0G2JMS6 1433 aa15.3■□□□□ 0.04
LINC00473-202ENST00000455853 SOX12O15370 315 aa15.3■□□□□ 0.04
LINC00473-202ENST00000455853 FOXD4L6Q3SYB3 417 aaPredicted RBP15.3■□□□□ 0.04
LINC00473-202ENST00000455853 CWC27Q6UX04 472 aaKnown RBP15.3■□□□□ 0.04
LINC00473-202ENST00000455853 FOXD4L3Q6VB84 417 aaPredicted RBP15.3■□□□□ 0.04
LINC00473-202ENST00000455853 SNRKQ9NRH2 765 aa15.3■□□□□ 0.04
LINC00473-202ENST00000455853 LTN1O94822 1766 aa15.3■□□□□ 0.04
LINC00473-202ENST00000455853 OS9Q13438 667 aaPredicted RBP15.29■□□□□ 0.04
LINC00473-202ENST00000455853 KIAA1524Q8TCG1 905 aa15.29■□□□□ 0.04
LINC00473-202ENST00000455853 FAM200AQ8TCP9 573 aa15.29■□□□□ 0.04
LINC00473-202ENST00000455853 JAKMIP1Q96N16 626 aaKnown RBP15.29■□□□□ 0.04
LINC00473-202ENST00000455853 CAVIN2O95810 425 aa15.29■□□□□ 0.04
LINC00473-202ENST00000455853 NLRP6P59044 892 aa15.29■□□□□ 0.04
LINC00473-202ENST00000455853 EIF4A1P60842 406 aaKnown RBP15.29■□□□□ 0.04
LINC00473-202ENST00000455853 MAP3K11Q16584 847 aa15.29■□□□□ 0.04
LINC00473-202ENST00000455853 UTP14CQ5TAP6 766 aaKnown RBP15.29■□□□□ 0.04
LINC00473-202ENST00000455853 RNF20Q5VTR2 975 aa15.29■□□□□ 0.04
LINC00473-202ENST00000455853 CCDC83Q8IWF9 413 aa15.29■□□□□ 0.04
LINC00473-202ENST00000455853 NECTIN2Q92692 538 aa15.29■□□□□ 0.04
LINC00473-202ENST00000455853 SCAND2PQ9GZW5 306 aaPredicted RBP15.29■□□□□ 0.04
LINC00473-202ENST00000455853 NCAPD2Q15021 1401 aa15.28■□□□□ 0.04
LINC00473-202ENST00000455853 PHRF1Q9P1Y6 1649 aaKnown RBP15.28■□□□□ 0.04
LINC00473-202ENST00000455853 RBM6P78332 1123 aaKnown RBP15.28■□□□□ 0.04
LINC00473-202ENST00000455853 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.28■□□□□ 0.04
LINC00473-202ENST00000455853 PHAXQ9H814 394 aaKnown RBP15.28■□□□□ 0.04
LINC00473-202ENST00000455853 TTC12Q9H892 705 aaPredicted RBP15.28■□□□□ 0.04
LINC00473-202ENST00000455853 DDX19AQ9NUU7 478 aaKnown RBP15.28■□□□□ 0.04
LINC00473-202ENST00000455853 MAP4K4O95819 1239 aaPredicted RBP15.27■□□□□ 0.04
LINC00473-202ENST00000455853 IFIT2P09913 472 aaKnown RBP15.27■□□□□ 0.04
LINC00473-202ENST00000455853 DNM1Q05193 864 aaKnown RBP15.27■□□□□ 0.04
LINC00473-202ENST00000455853 NECTIN1Q15223 517 aa15.27■□□□□ 0.04
LINC00473-202ENST00000455853 SYCP1Q15431 976 aa15.27■□□□□ 0.04
LINC00473-202ENST00000455853 NUP62CLQ9H1M0 184 aa15.27■□□□□ 0.04
LINC00473-202ENST00000455853 GIMAP6Q6P9H5 292 aa15.27■□□□□ 0.03
LINC00473-202ENST00000455853 HMG20BQ9P0W2 317 aa15.27■□□□□ 0.03
LINC00473-202ENST00000455853 SPG7Q9UQ90 795 aa15.27■□□□□ 0.03
LINC00473-202ENST00000455853 BCL9LQ86UU0 1499 aa15.26■□□□□ 0.03
LINC00473-202ENST00000455853 PRPF40BQ6NWY9 871 aaKnown RBP15.26■□□□□ 0.03
LINC00473-202ENST00000455853 TRPC5Q9UL62 973 aaPredicted RBP15.26■□□□□ 0.03
LINC00473-202ENST00000455853 VPS37CA5D8V6 355 aaPredicted RBP15.25■□□□□ 0.03
LINC00473-202ENST00000455853 NBPF7P0C2Y1 421 aaPredicted RBP15.25■□□□□ 0.03
LINC00473-202ENST00000455853 LARP1BQ659C4 914 aaKnown RBP15.25■□□□□ 0.03
LINC00473-202ENST00000455853 MAP4K1Q92918 833 aa15.25■□□□□ 0.03
LINC00473-202ENST00000455853 DBF4Q9UBU7 674 aaPredicted RBP15.25■□□□□ 0.03
LINC00473-202ENST00000455853 TRPM3Q9HCF6 1732 aaPredicted RBP15.25■□□□□ 0.03
LINC00473-202ENST00000455853 ATRNO75882 1429 aa15.25■□□□□ 0.03
LINC00473-202ENST00000455853 PI4KAP2A4QPH2 592 aa15.24■□□□□ 0.03
LINC00473-202ENST00000455853 LARGE1O95461 756 aa15.24■□□□□ 0.03
LINC00473-202ENST00000455853 CREB3L3Q68CJ9 461 aa15.24■□□□□ 0.03
LINC00473-202ENST00000455853 PI4KAP1Q8N8J0 262 aa15.24■□□□□ 0.03
LINC00473-202ENST00000455853 ZNF830Q96NB3 372 aaPredicted RBP15.24■□□□□ 0.03
LINC00473-202ENST00000455853 ADCY9O60503 1353 aa15.24■□□□□ 0.03
LINC00473-202ENST00000455853 PTH1RQ03431 593 aa15.24■□□□□ 0.03
LINC00473-202ENST00000455853 TSGA10IPQ3SY00 556 aa15.24■□□□□ 0.03
LINC00473-202ENST00000455853 NUTM2GQ5VZR2 741 aa15.24■□□□□ 0.03
LINC00473-202ENST00000455853 RBM43Q6ZSC3 357 aaKnown RBP15.24■□□□□ 0.03
LINC00473-202ENST00000455853 CHPF2Q9P2E5 772 aa15.24■□□□□ 0.03
LINC00473-202ENST00000455853 RBM8AQ9Y5S9 174 aaKnown RBP15.24■□□□□ 0.03
LINC00473-202ENST00000455853 RFX7Q2KHR2 1363 aa15.23■□□□□ 0.03
LINC00473-202ENST00000455853 GOLGA6L4A6NEF3 574 aa15.23■□□□□ 0.03
LINC00473-202ENST00000455853 GIGYF1O75420 1035 aaPredicted RBP15.23■□□□□ 0.03
LINC00473-202ENST00000455853 KCNJ4P48050 445 aa15.23■□□□□ 0.03
LINC00473-202ENST00000455853 TYRO3Q06418 890 aa15.23■□□□□ 0.03
LINC00473-202ENST00000455853 KRT32Q14532 448 aa15.23■□□□□ 0.03
LINC00473-202ENST00000455853 ME3Q16798 604 aa15.23■□□□□ 0.03
LINC00473-202ENST00000455853 AKAP4Q5JQC9 854 aa15.23■□□□□ 0.03
LINC00473-202ENST00000455853 PRDM4Q9UKN5 801 aa15.23■□□□□ 0.03
LINC00473-202ENST00000455853 SLIT2O94813 1529 aa15.23■□□□□ 0.03
LINC00473-202ENST00000455853 CTIFO43310 598 aaKnown RBP15.22■□□□□ 0.03
LINC00473-202ENST00000455853 EIF2S2P20042 333 aaKnown RBP15.22■□□□□ 0.03
LINC00473-202ENST00000455853 BLOC1S2Q6QNY1 142 aa15.22■□□□□ 0.03
LINC00473-202ENST00000455853 ZNF710Q8N1W2 664 aa15.22■□□□□ 0.03
LINC00473-202ENST00000455853 IP6K1Q92551 441 aa15.22■□□□□ 0.03
LINC00473-202ENST00000455853 GTPBP4Q9BZE4 634 aaKnown RBP15.22■□□□□ 0.03
LINC00473-202ENST00000455853 C9orf78Q9NZ63 289 aaPredicted RBP15.22■□□□□ 0.03
LINC00473-202ENST00000455853 UTYO14607 1347 aa15.22■□□□□ 0.03
LINC00473-202ENST00000455853 CDC25BP30305 580 aa15.22■□□□□ 0.03
LINC00473-202ENST00000455853 PLCB2Q00722 1185 aa15.22■□□□□ 0.03
LINC00473-202ENST00000455853 TEFQ10587 303 aa15.22■□□□□ 0.03
LINC00473-202ENST00000455853 ADCK5Q3MIX3 580 aa15.22■□□□□ 0.03
LINC00473-202ENST00000455853 KSR2Q6VAB6 950 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms