RNA–Protein interactions for RNA: ENST00000455527.5

RFTN1P1-202, Transcript of raftlin, lipid raft linker 1 pseudogene 1, humanhuman

BASIC

Gene RFTN1P1, Length 996 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1P1-202ENST00000455527 PLBD2Q8NHP8 589 aa13.05□□□□□ -0.32
RFTN1P1-202ENST00000455527 CHMP4AQ9BY43 222 aa13.05□□□□□ -0.32
RFTN1P1-202ENST00000455527 DICER1Q9UPY3 1922 aaKnown RBP13.04□□□□□ -0.32
RFTN1P1-202ENST00000455527 KIF3CO14782 793 aa13.04□□□□□ -0.32
RFTN1P1-202ENST00000455527 HOXA10P31260 410 aaPredicted RBP13.04□□□□□ -0.32
RFTN1P1-202ENST00000455527 NLRP10Q86W26 655 aa13.04□□□□□ -0.32
RFTN1P1-202ENST00000455527 C8orf58Q8NAV2 365 aa13.04□□□□□ -0.32
RFTN1P1-202ENST00000455527 ZNF526Q8TF50 670 aaPredicted RBP13.04□□□□□ -0.32
RFTN1P1-202ENST00000455527 UTP14AQ9BVJ6 771 aaKnown RBP13.04□□□□□ -0.32
RFTN1P1-202ENST00000455527 ALDH1B1P30837 517 aa13.03□□□□□ -0.32
RFTN1P1-202ENST00000455527 CCDC93Q567U6 631 aa13.03□□□□□ -0.32
RFTN1P1-202ENST00000455527 SLC10A5Q5PT55 438 aa13.03□□□□□ -0.32
RFTN1P1-202ENST00000455527 ANKRD13DQ6ZTN6 518 aa13.03□□□□□ -0.32
RFTN1P1-202ENST00000455527 TSR2Q969E8 191 aaKnown RBP13.03□□□□□ -0.32
RFTN1P1-202ENST00000455527 ISCA1Q9BUE6 129 aa13.03□□□□□ -0.32
RFTN1P1-202ENST00000455527 TAOK3Q9H2K8 898 aa13.03□□□□□ -0.32
RFTN1P1-202ENST00000455527 LAMB2P55268 1798 aa13.02□□□□□ -0.32
RFTN1P1-202ENST00000455527 CCDC30Q5VVM6 783 aa13.02□□□□□ -0.33
RFTN1P1-202ENST00000455527 WDR63Q8IWG1 891 aa13.02□□□□□ -0.33
RFTN1P1-202ENST00000455527 TSPYL6Q8N831 410 aa13.02□□□□□ -0.33
RFTN1P1-202ENST00000455527 CCDC88AQ3V6T2 1871 aa13.02□□□□□ -0.33
RFTN1P1-202ENST00000455527 ELL2O00472 640 aaPredicted RBP13.01□□□□□ -0.33
RFTN1P1-202ENST00000455527 TRIM28Q13263 835 aaKnown RBP13.01□□□□□ -0.33
RFTN1P1-202ENST00000455527 C3orf67Q6ZVT6 689 aa13.01□□□□□ -0.33
RFTN1P1-202ENST00000455527 CRAMP1Q96RY5 1269 aa13.01□□□□□ -0.33
RFTN1P1-202ENST00000455527 ZNF219Q9P2Y4 722 aaPredicted RBP13.01□□□□□ -0.33
RFTN1P1-202ENST00000455527 KDM2BQ8NHM5 1336 aa13.01□□□□□ -0.33
RFTN1P1-202ENST00000455527 SH3TC1Q8TE82 1336 aa13.01□□□□□ -0.33
RFTN1P1-202ENST00000455527 FANCIQ9NVI1 1328 aa13.01□□□□□ -0.33
RFTN1P1-202ENST00000455527 DDX60Q8IY21 1712 aaKnown RBP13.01□□□□□ -0.33
RFTN1P1-202ENST00000455527 FKBP4Q02790 459 aaKnown RBP eCLIP13□□□□□ -0.33
RFTN1P1-202ENST00000455527 GOLGA2Q08379 1002 aa13□□□□□ -0.33
RFTN1P1-202ENST00000455527 CC2D2BQ6DHV5 1058 aa13□□□□□ -0.33
RFTN1P1-202ENST00000455527 FAM9BQ8IZU0 186 aa13□□□□□ -0.33
RFTN1P1-202ENST00000455527 RPGRQ92834 1020 aaKnown RBP13□□□□□ -0.33
RFTN1P1-202ENST00000455527 NLRP3Q96P20 1036 aa13□□□□□ -0.33
RFTN1P1-202ENST00000455527 PHAXQ9H814 394 aaKnown RBP13□□□□□ -0.33
RFTN1P1-202ENST00000455527 NMRK2Q9NPI5 230 aa13□□□□□ -0.33
RFTN1P1-202ENST00000455527 SENP3-EIF4A1A0A087X0R7 540 aa12.99□□□□□ -0.33
RFTN1P1-202ENST00000455527 GLTPD2A6NH11 291 aa12.99□□□□□ -0.33
RFTN1P1-202ENST00000455527 TWISTNBQ3B726 338 aaPredicted RBP12.99□□□□□ -0.33
RFTN1P1-202ENST00000455527 RTKN2Q8IZC4 609 aa12.99□□□□□ -0.33
RFTN1P1-202ENST00000455527 RBM17Q96I25 401 aaKnown RBP12.99□□□□□ -0.33
RFTN1P1-202ENST00000455527 TRMT112Q9UI30 125 aaKnown RBP12.99□□□□□ -0.33
RFTN1P1-202ENST00000455527 WDR90Q96KV7 1748 aa12.99□□□□□ -0.33
RFTN1P1-202ENST00000455527 ABCC4O15439 1325 aa12.98□□□□□ -0.33
RFTN1P1-202ENST00000455527 ZNF521Q96K83 1311 aa12.98□□□□□ -0.33
RFTN1P1-202ENST00000455527 GRIPAP1Q4V328 841 aa12.98□□□□□ -0.33
RFTN1P1-202ENST00000455527 RIC3Q7Z5B4 369 aa12.98□□□□□ -0.33
RFTN1P1-202ENST00000455527 PSMD1Q99460 953 aa12.98□□□□□ -0.33
RFTN1P1-202ENST00000455527 LRRC37AA6NMS7 1700 aa12.97□□□□□ -0.33
RFTN1P1-202ENST00000455527 ATP5J2-PTCD1G3V325 749 aa12.97□□□□□ -0.33
RFTN1P1-202ENST00000455527 PPEF1O14829 653 aaPredicted RBP12.97□□□□□ -0.33
RFTN1P1-202ENST00000455527 TOMM70O94826 608 aa12.97□□□□□ -0.33
RFTN1P1-202ENST00000455527 DDX58O95786 925 aaKnown RBP12.97□□□□□ -0.33
RFTN1P1-202ENST00000455527 OLFM4Q6UX06 510 aa12.97□□□□□ -0.33
RFTN1P1-202ENST00000455527 STK31Q9BXU1 1019 aa12.97□□□□□ -0.33
RFTN1P1-202ENST00000455527 CACNA1FO60840 1977 aa12.96□□□□□ -0.33
RFTN1P1-202ENST00000455527 HCLS1P14317 486 aaPredicted RBP12.96□□□□□ -0.33
RFTN1P1-202ENST00000455527 SYNE4Q8N205 404 aa12.96□□□□□ -0.33
RFTN1P1-202ENST00000455527 CCDC191Q8NCU4 936 aa12.96□□□□□ -0.33
RFTN1P1-202ENST00000455527 SPINK5Q9NQ38 1064 aaPredicted RBP12.96□□□□□ -0.33
RFTN1P1-202ENST00000455527 SF3B3Q15393 1217 aaKnown RBP12.95□□□□□ -0.34
RFTN1P1-202ENST00000455527 KSR2Q6VAB6 950 aa12.95□□□□□ -0.34
RFTN1P1-202ENST00000455527 ZBTB38Q8NAP3 1195 aaPredicted RBP12.95□□□□□ -0.34
RFTN1P1-202ENST00000455527 RBM46Q8TBY0 533 aaKnown RBP12.95□□□□□ -0.34
RFTN1P1-202ENST00000455527 FAM89AQ96GI7 184 aa12.95□□□□□ -0.34
RFTN1P1-202ENST00000455527 MYD88Q99836 296 aa12.95□□□□□ -0.34
RFTN1P1-202ENST00000455527 METTL22Q9BUU2 404 aaPredicted RBP12.95□□□□□ -0.34
RFTN1P1-202ENST00000455527 MYH16Q9H6N6 1097 aa12.95□□□□□ -0.34
RFTN1P1-202ENST00000455527 SALL2Q9Y467 1007 aaPredicted RBP12.95□□□□□ -0.34
RFTN1P1-202ENST00000455527 ATP6V0A2Q9Y487 856 aa12.95□□□□□ -0.34
RFTN1P1-202ENST00000455527 CEP350Q5VT06 3117 aa12.95□□□□□ -0.34
RFTN1P1-202ENST00000455527 CCER2I3L3R5 266 aa12.94□□□□□ -0.34
RFTN1P1-202ENST00000455527 VAMP4O75379 141 aa12.94□□□□□ -0.34
RFTN1P1-202ENST00000455527 IARSP41252 1262 aaKnown RBP12.94□□□□□ -0.34
RFTN1P1-202ENST00000455527 GRAPQ13588 217 aa12.94□□□□□ -0.34
RFTN1P1-202ENST00000455527 DPY19L2Q6NUT2 758 aa12.94□□□□□ -0.34
RFTN1P1-202ENST00000455527 GRAPLQ8TC17 118 aaPredicted RBP12.94□□□□□ -0.34
RFTN1P1-202ENST00000455527 ZNF277Q9NRM2 450 aaPredicted RBP12.94□□□□□ -0.34
RFTN1P1-202ENST00000455527 COL4A5P29400 1685 aa12.93□□□□□ -0.34
RFTN1P1-202ENST00000455527 PI4KAP2A4QPH2 592 aa12.93□□□□□ -0.34
RFTN1P1-202ENST00000455527 BBOX1O75936 387 aa12.93□□□□□ -0.34
RFTN1P1-202ENST00000455527 PCCAP05165 728 aaPredicted RBP12.93□□□□□ -0.34
RFTN1P1-202ENST00000455527 HSP90B1P14625 803 aaKnown RBP12.93□□□□□ -0.34
RFTN1P1-202ENST00000455527 HSPA6P17066 643 aa12.93□□□□□ -0.34
RFTN1P1-202ENST00000455527 EXOSC9Q06265 439 aaKnown RBP12.93□□□□□ -0.34
RFTN1P1-202ENST00000455527 FLIIQ13045 1269 aa12.93□□□□□ -0.34
RFTN1P1-202ENST00000455527 DDX46Q7L014 1031 aaKnown RBP12.93□□□□□ -0.34
RFTN1P1-202ENST00000455527 TMC4Q7Z404 712 aa12.93□□□□□ -0.34
RFTN1P1-202ENST00000455527 SLC51AQ86UW1 340 aa12.93□□□□□ -0.34
RFTN1P1-202ENST00000455527 PI4KAP1Q8N8J0 262 aa12.93□□□□□ -0.34
RFTN1P1-202ENST00000455527 RRAGCQ9HB90 399 aa12.93□□□□□ -0.34
RFTN1P1-202ENST00000455527 CWC25Q9NXE8 425 aaPredicted RBP12.93□□□□□ -0.34
RFTN1P1-202ENST00000455527 MAP3K2Q9Y2U5 619 aa12.93□□□□□ -0.34
RFTN1P1-202ENST00000455527 DUOX1Q9NRD9 1551 aa12.93□□□□□ -0.34
RFTN1P1-202ENST00000455527 CDHR2Q9BYE9 1310 aa12.92□□□□□ -0.34
RFTN1P1-202ENST00000455527 POTECB2RU33 542 aa12.92□□□□□ -0.34
RFTN1P1-202ENST00000455527 FZD9O00144 591 aa12.92□□□□□ -0.34
RFTN1P1-202ENST00000455527 IRS4O14654 1257 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms