RNA–Protein interactions for RNA: ENST00000454498.6

CSGALNACT1-203, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 4,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-203ENST00000454498 DZIP3Q86Y13 1208 aaKnown RBP11.78□□□□□ -0.52
CSGALNACT1-203ENST00000454498 NIP7Q9Y221 180 aaKnown RBP eCLIP11.78□□□□□ -0.52
CSGALNACT1-203ENST00000454498 CDC42BPAQ5VT25 1732 aa11.77□□□□□ -0.52
CSGALNACT1-203ENST00000454498 UQCRFS1P1P0C7P4 283 aa11.77□□□□□ -0.52
CSGALNACT1-203ENST00000454498 ANAPC15P60006 121 aa11.77□□□□□ -0.52
CSGALNACT1-203ENST00000454498 STX6O43752 255 aa11.77□□□□□ -0.53
CSGALNACT1-203ENST00000454498 MAP3K11Q16584 847 aa11.77□□□□□ -0.53
CSGALNACT1-203ENST00000454498 SLC12A7Q9Y666 1083 aa11.77□□□□□ -0.53
CSGALNACT1-203ENST00000454498 ZFYP08048 801 aaPredicted RBP11.77□□□□□ -0.53
CSGALNACT1-203ENST00000454498 FILIP1LQ4L180 1135 aa11.77□□□□□ -0.53
CSGALNACT1-203ENST00000454498 CEP57L1Q8IYX8 460 aa11.77□□□□□ -0.53
CSGALNACT1-203ENST00000454498 CTCFLQ8NI51 663 aaPredicted RBP11.77□□□□□ -0.53
CSGALNACT1-203ENST00000454498 SLAIN2Q9P270 581 aa11.77□□□□□ -0.53
CSGALNACT1-203ENST00000454498 TTC41PQ6P2S7 1318 aa11.76□□□□□ -0.53
CSGALNACT1-203ENST00000454498 BAG4O95429 457 aaKnown RBP11.76□□□□□ -0.53
CSGALNACT1-203ENST00000454498 BRPF1P55201 1214 aaPredicted RBP11.76□□□□□ -0.53
CSGALNACT1-203ENST00000454498 HSP90AA2PQ14568 343 aaPredicted RBP11.76□□□□□ -0.53
CSGALNACT1-203ENST00000454498 TFIP11Q9UBB9 837 aaKnown RBP11.76□□□□□ -0.53
CSGALNACT1-203ENST00000454498 SERPINC1P01008 464 aa11.76□□□□□ -0.53
CSGALNACT1-203ENST00000454498 GJB2P29033 226 aa11.76□□□□□ -0.53
CSGALNACT1-203ENST00000454498 GOLGA6L1Q8N7Z2 621 aa11.76□□□□□ -0.53
CSGALNACT1-203ENST00000454498 BRF1Q92994 677 aa11.76□□□□□ -0.53
CSGALNACT1-203ENST00000454498 BICC1Q9H694 974 aaKnown RBP11.76□□□□□ -0.53
CSGALNACT1-203ENST00000454498 IQSEC3Q9UPP2 1182 aaPredicted RBP11.76□□□□□ -0.53
CSGALNACT1-203ENST00000454498 USP16Q9Y5T5 823 aa11.76□□□□□ -0.53
CSGALNACT1-203ENST00000454498 USP19O94966 1318 aa11.76□□□□□ -0.53
CSGALNACT1-203ENST00000454498 OFD1O75665 1012 aa11.76□□□□□ -0.53
CSGALNACT1-203ENST00000454498 OTUD7AQ8TE49 926 aaPredicted RBP11.76□□□□□ -0.53
CSGALNACT1-203ENST00000454498 TMOD2Q9NZR1 351 aa11.76□□□□□ -0.53
CSGALNACT1-203ENST00000454498 R3HCC1Q9Y3T6 440 aaKnown RBP11.76□□□□□ -0.53
CSGALNACT1-203ENST00000454498 PPFIA3O75145 1194 aa11.75□□□□□ -0.53
CSGALNACT1-203ENST00000454498 ANKRD18AQ8IVF6 992 aa11.75□□□□□ -0.53
CSGALNACT1-203ENST00000454498 IL17REQ8NFR9 667 aa11.75□□□□□ -0.53
CSGALNACT1-203ENST00000454498 ZNF496Q96IT1 587 aaPredicted RBP11.75□□□□□ -0.53
CSGALNACT1-203ENST00000454498 NLRP3Q96P20 1036 aa11.75□□□□□ -0.53
CSGALNACT1-203ENST00000454498 HECW2Q9P2P5 1572 aa11.75□□□□□ -0.53
CSGALNACT1-203ENST00000454498 KDM2BQ8NHM5 1336 aa11.75□□□□□ -0.53
CSGALNACT1-203ENST00000454498 CAMK4Q16566 473 aa11.75□□□□□ -0.53
CSGALNACT1-203ENST00000454498 SETDB2Q96T68 719 aa11.75□□□□□ -0.53
CSGALNACT1-203ENST00000454498 PLEKHG1Q9ULL1 1385 aa11.75□□□□□ -0.53
CSGALNACT1-203ENST00000454498 GOLGA8AA7E2F4 631 aa11.75□□□□□ -0.53
CSGALNACT1-203ENST00000454498 MCMDC2Q4G0Z9 681 aa11.75□□□□□ -0.53
CSGALNACT1-203ENST00000454498 MICU3Q86XE3 530 aa11.75□□□□□ -0.53
CSGALNACT1-203ENST00000454498 CCAR1Q8IX12 1150 aaKnown RBP11.75□□□□□ -0.53
CSGALNACT1-203ENST00000454498 NECAB1Q8N987 351 aa11.75□□□□□ -0.53
CSGALNACT1-203ENST00000454498 SLC52A2Q9HAB3 445 aa11.75□□□□□ -0.53
CSGALNACT1-203ENST00000454498 ARHGEF10O15013 1369 aa11.75□□□□□ -0.53
CSGALNACT1-203ENST00000454498 KRT18P05783 430 aaKnown RBP11.75□□□□□ -0.53
CSGALNACT1-203ENST00000454498 ZNF444Q8N0Y2 327 aaPredicted RBP11.75□□□□□ -0.53
CSGALNACT1-203ENST00000454498 NCOA7Q8NI08 942 aa11.75□□□□□ -0.53
CSGALNACT1-203ENST00000454498 ORC3Q9UBD5 711 aaPredicted RBP11.75□□□□□ -0.53
CSGALNACT1-203ENST00000454498 ROBO2Q9HCK4 1378 aa11.74□□□□□ -0.53
CSGALNACT1-203ENST00000454498 TSPOAP1O95153 1857 aa11.74□□□□□ -0.53
CSGALNACT1-203ENST00000454498 IRS4O14654 1257 aaPredicted RBP11.74□□□□□ -0.53
CSGALNACT1-203ENST00000454498 EPS15P42566 896 aa11.74□□□□□ -0.53
CSGALNACT1-203ENST00000454498 EIF4A1P60842 406 aaKnown RBP11.74□□□□□ -0.53
CSGALNACT1-203ENST00000454498 CCDC70Q6NSX1 233 aa11.74□□□□□ -0.53
CSGALNACT1-203ENST00000454498 NBPF7P0C2Y1 421 aaPredicted RBP11.74□□□□□ -0.53
CSGALNACT1-203ENST00000454498 CHMLP26374 656 aa11.74□□□□□ -0.53
CSGALNACT1-203ENST00000454498 SNX21Q969T3 373 aa11.74□□□□□ -0.53
CSGALNACT1-203ENST00000454498 LRRC2Q9BYS8 371 aa11.74□□□□□ -0.53
CSGALNACT1-203ENST00000454498 A1BGP04217 495 aa11.74□□□□□ -0.53
CSGALNACT1-203ENST00000454498 LDHCP07864 332 aa11.74□□□□□ -0.53
CSGALNACT1-203ENST00000454498 TMEM67Q5HYA8 995 aa11.74□□□□□ -0.53
CSGALNACT1-203ENST00000454498 SLC9C2Q5TAH2 1124 aa11.74□□□□□ -0.53
CSGALNACT1-203ENST00000454498 MNS1Q8NEH6 495 aa11.74□□□□□ -0.53
CSGALNACT1-203ENST00000454498 HELBQ8NG08 1087 aaPredicted RBP11.74□□□□□ -0.53
CSGALNACT1-203ENST00000454498 LMTK3Q96Q04 1460 aa11.74□□□□□ -0.53
CSGALNACT1-203ENST00000454498 KIAA0232Q92628 1395 aa11.73□□□□□ -0.53
CSGALNACT1-203ENST00000454498 TFCP2Q12800 502 aa11.73□□□□□ -0.53
CSGALNACT1-203ENST00000454498 NMIQ13287 307 aaPredicted RBP11.73□□□□□ -0.53
CSGALNACT1-203ENST00000454498 RAB11FIP4Q86YS3 637 aa11.73□□□□□ -0.53
CSGALNACT1-203ENST00000454498 PLBD2Q8NHP8 589 aa11.73□□□□□ -0.53
CSGALNACT1-203ENST00000454498 FAM89AQ96GI7 184 aa11.73□□□□□ -0.53
CSGALNACT1-203ENST00000454498 METTL22Q9BUU2 404 aaPredicted RBP11.73□□□□□ -0.53
CSGALNACT1-203ENST00000454498 PRR36Q9H6K5 1346 aa11.73□□□□□ -0.53
CSGALNACT1-203ENST00000454498 CRACR2BQ8N4Y2 399 aaPredicted RBP11.73□□□□□ -0.53
CSGALNACT1-203ENST00000454498 PLEKHF1Q96S99 279 aa11.73□□□□□ -0.53
CSGALNACT1-203ENST00000454498 UTP14AQ9BVJ6 771 aaKnown RBP11.73□□□□□ -0.53
CSGALNACT1-203ENST00000454498 PAG1Q9NWQ8 432 aa11.73□□□□□ -0.53
CSGALNACT1-203ENST00000454498 MAGEC2Q9UBF1 373 aaPredicted RBP11.73□□□□□ -0.53
CSGALNACT1-203ENST00000454498 DACH1Q9UI36 760 aa11.73□□□□□ -0.53
CSGALNACT1-203ENST00000454498 PNMA6EA0A0J9YXQ4 647 aa11.73□□□□□ -0.53
CSGALNACT1-203ENST00000454498 MCM5P33992 734 aa11.73□□□□□ -0.53
CSGALNACT1-203ENST00000454498 IARSP41252 1262 aaKnown RBP11.73□□□□□ -0.53
CSGALNACT1-203ENST00000454498 CCDC183Q5T5S1 534 aa11.73□□□□□ -0.53
CSGALNACT1-203ENST00000454498 MFSD6Q6ZSS7 791 aa11.73□□□□□ -0.53
CSGALNACT1-203ENST00000454498 FILIP1Q7Z7B0 1213 aa11.73□□□□□ -0.53
CSGALNACT1-203ENST00000454498 NAP1L1P55209 391 aaKnown RBP11.72□□□□□ -0.53
CSGALNACT1-203ENST00000454498 STIM1Q13586 685 aa11.72□□□□□ -0.53
CSGALNACT1-203ENST00000454498 ZNF219Q9P2Y4 722 aaPredicted RBP11.72□□□□□ -0.53
CSGALNACT1-203ENST00000454498 AATKQ6ZMQ8 1374 aa11.72□□□□□ -0.53
CSGALNACT1-203ENST00000454498 MPHOSPH10O00566 681 aaKnown RBP11.72□□□□□ -0.53
CSGALNACT1-203ENST00000454498 ZHX3Q9H4I2 956 aa11.72□□□□□ -0.53
CSGALNACT1-203ENST00000454498 CEP131Q9UPN4 1083 aa11.72□□□□□ -0.53
CSGALNACT1-203ENST00000454498 ABCC3O15438 1527 aa11.72□□□□□ -0.53
CSGALNACT1-203ENST00000454498 SSBP05455 408 aaKnown RBP eCLIP11.72□□□□□ -0.53
CSGALNACT1-203ENST00000454498 CCDC144CPQ8IYA2 1237 aa11.72□□□□□ -0.53
CSGALNACT1-203ENST00000454498 KLHDC4Q8TBB5 520 aa11.72□□□□□ -0.53
CSGALNACT1-203ENST00000454498 BCL11BQ9C0K0 894 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms