RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 KIF6Q6ZMV9 814 aa18.97■□□□□ 0.63
LYSMD3-202ENST00000453259 ERBB4Q15303 1308 aa18.97■□□□□ 0.63
LYSMD3-202ENST00000453259 THSD7BQ9C0I4 1608 aa18.96■□□□□ 0.63
LYSMD3-202ENST00000453259 OLFM4Q6UX06 510 aa18.96■□□□□ 0.63
LYSMD3-202ENST00000453259 CRAMP1Q96RY5 1269 aa18.96■□□□□ 0.63
LYSMD3-202ENST00000453259 KDM3BQ7LBC6 1761 aa18.96■□□□□ 0.63
LYSMD3-202ENST00000453259 ABCC12Q96J65 1359 aa18.95■□□□□ 0.62
LYSMD3-202ENST00000453259 ECE1P42892 770 aa18.95■□□□□ 0.62
LYSMD3-202ENST00000453259 MAP1SQ66K74 1059 aaPredicted RBP18.95■□□□□ 0.62
LYSMD3-202ENST00000453259 USP50Q70EL3 339 aaPredicted RBP18.95■□□□□ 0.62
LYSMD3-202ENST00000453259 DDX21Q9NR30 783 aaKnown RBP eCLIP18.95■□□□□ 0.62
LYSMD3-202ENST00000453259 WDR33Q9C0J8 1336 aaKnown RBP18.95■□□□□ 0.62
LYSMD3-202ENST00000453259 FAM177BA6PVY3 158 aa18.94■□□□□ 0.62
LYSMD3-202ENST00000453259 CNGB1Q14028 1251 aaPredicted RBP18.94■□□□□ 0.62
LYSMD3-202ENST00000453259 RBM17Q96I25 401 aaKnown RBP18.94■□□□□ 0.62
LYSMD3-202ENST00000453259 TMX4Q9H1E5 349 aaPredicted RBP18.94■□□□□ 0.62
LYSMD3-202ENST00000453259 ABT1Q9ULW3 272 aaKnown RBP18.94■□□□□ 0.62
LYSMD3-202ENST00000453259 NUP98P52948 1817 aa18.94■□□□□ 0.62
LYSMD3-202ENST00000453259 LBX1P52954 281 aa18.93■□□□□ 0.62
LYSMD3-202ENST00000453259 DCTN1Q14203 1278 aa18.93■□□□□ 0.62
LYSMD3-202ENST00000453259 PIAS4Q8N2W9 510 aaPredicted RBP18.93■□□□□ 0.62
LYSMD3-202ENST00000453259 PARP10Q53GL7 1025 aa18.92■□□□□ 0.62
LYSMD3-202ENST00000453259 LARGE2Q8N3Y3 721 aa18.92■□□□□ 0.62
LYSMD3-202ENST00000453259 PNNQ9H307 717 aaKnown RBP18.92■□□□□ 0.62
LYSMD3-202ENST00000453259 PPEF1O14829 653 aaPredicted RBP18.91■□□□□ 0.62
LYSMD3-202ENST00000453259 HSPA8P11142 646 aaKnown RBP18.91■□□□□ 0.62
LYSMD3-202ENST00000453259 SCNN1DP51172 638 aa18.91■□□□□ 0.62
LYSMD3-202ENST00000453259 PPP1R42Q7Z4L9 355 aa18.91■□□□□ 0.62
LYSMD3-202ENST00000453259 NUTM1Q86Y26 1132 aa18.91■□□□□ 0.62
LYSMD3-202ENST00000453259 NIM1KQ8IY84 436 aa18.91■□□□□ 0.62
LYSMD3-202ENST00000453259 BEGAINQ9BUH8 593 aa18.91■□□□□ 0.62
LYSMD3-202ENST00000453259 GJA3Q9Y6H8 435 aa18.91■□□□□ 0.62
LYSMD3-202ENST00000453259 CDHR2Q9BYE9 1310 aa18.91■□□□□ 0.62
LYSMD3-202ENST00000453259 EIF4A1P60842 406 aaKnown RBP18.9■□□□□ 0.62
LYSMD3-202ENST00000453259 GIGYF2Q6Y7W6 1299 aaKnown RBP18.9■□□□□ 0.62
LYSMD3-202ENST00000453259 ZNF34Q8IZ26 560 aa18.9■□□□□ 0.62
LYSMD3-202ENST00000453259 SUPT20HQ8NEM7 779 aa18.9■□□□□ 0.62
LYSMD3-202ENST00000453259 UBN2Q6ZU65 1347 aa18.9■□□□□ 0.62
LYSMD3-202ENST00000453259 COL4A5P29400 1685 aa18.89■□□□□ 0.61
LYSMD3-202ENST00000453259 LTBP1Q14766 1721 aa18.88■□□□□ 0.61
LYSMD3-202ENST00000453259 CA12O43570 354 aa18.88■□□□□ 0.61
LYSMD3-202ENST00000453259 NTSR2O95665 410 aa18.88■□□□□ 0.61
LYSMD3-202ENST00000453259 MAP2K2P36507 400 aa18.88■□□□□ 0.61
LYSMD3-202ENST00000453259 HHIPL1Q96JK4 782 aa18.88■□□□□ 0.61
LYSMD3-202ENST00000453259 CAPNS2Q96L46 248 aa18.88■□□□□ 0.61
LYSMD3-202ENST00000453259 NLRP3Q96P20 1036 aa18.88■□□□□ 0.61
LYSMD3-202ENST00000453259 ADARB2Q9NS39 739 aaKnown RBP18.88■□□□□ 0.61
LYSMD3-202ENST00000453259 RRP7AQ9Y3A4 280 aaKnown RBP18.88■□□□□ 0.61
LYSMD3-202ENST00000453259 ATP6V0A2Q9Y487 856 aa18.88■□□□□ 0.61
LYSMD3-202ENST00000453259 NFE2L2Q16236 605 aa18.87■□□□□ 0.61
LYSMD3-202ENST00000453259 SLC10A5Q5PT55 438 aa18.87■□□□□ 0.61
LYSMD3-202ENST00000453259 SUSD4Q5VX71 490 aa18.87■□□□□ 0.61
LYSMD3-202ENST00000453259 TTLL7Q6ZT98 887 aa18.87■□□□□ 0.61
LYSMD3-202ENST00000453259 ABHD8Q96I13 439 aa18.87■□□□□ 0.61
LYSMD3-202ENST00000453259 TRPM7Q96QT4 1865 aa18.87■□□□□ 0.61
LYSMD3-202ENST00000453259 RTFDC1Q9BY42 306 aaPredicted RBP18.87■□□□□ 0.61
LYSMD3-202ENST00000453259 MIS18AQ9NYP9 233 aa18.87■□□□□ 0.61
LYSMD3-202ENST00000453259 TLL2Q9Y6L7 1015 aa18.87■□□□□ 0.61
LYSMD3-202ENST00000453259 DLG5Q8TDM6 1919 aa18.86■□□□□ 0.61
LYSMD3-202ENST00000453259 PPIP5K2O43314 1243 aa18.86■□□□□ 0.61
LYSMD3-202ENST00000453259 GPTP24298 496 aa18.86■□□□□ 0.61
LYSMD3-202ENST00000453259 EPS15P42566 896 aa18.86■□□□□ 0.61
LYSMD3-202ENST00000453259 NGEFQ8N5V2 710 aa18.86■□□□□ 0.61
LYSMD3-202ENST00000453259 ZBTB3Q9H5J0 574 aa18.86■□□□□ 0.61
LYSMD3-202ENST00000453259 BABAM1Q9NWV8 329 aa18.86■□□□□ 0.61
LYSMD3-202ENST00000453259 GPRC5DQ9NZD1 345 aa18.86■□□□□ 0.61
LYSMD3-202ENST00000453259 MYL6BP14649 208 aa18.85■□□□□ 0.61
LYSMD3-202ENST00000453259 ZC3H15Q8WU90 426 aaKnown RBP18.85■□□□□ 0.61
LYSMD3-202ENST00000453259 GPR101Q96P66 508 aaPredicted RBP18.85■□□□□ 0.61
LYSMD3-202ENST00000453259 PLEKHF1Q96S99 279 aa18.85■□□□□ 0.61
LYSMD3-202ENST00000453259 ZNRF3Q9ULT6 936 aa18.85■□□□□ 0.61
LYSMD3-202ENST00000453259 BBOX1O75936 387 aa18.84■□□□□ 0.61
LYSMD3-202ENST00000453259 HSP90AB3PQ58FF7 597 aa18.84■□□□□ 0.61
LYSMD3-202ENST00000453259 UTP14AQ9BVJ6 771 aaKnown RBP18.84■□□□□ 0.61
LYSMD3-202ENST00000453259 MAPK8IP3Q9UPT6 1336 aa18.83■□□□□ 0.61
LYSMD3-202ENST00000453259 CST9Q5W186 159 aa18.83■□□□□ 0.6
LYSMD3-202ENST00000453259 TMC4Q7Z404 712 aa18.83■□□□□ 0.6
LYSMD3-202ENST00000453259 PGAP2Q9UHJ9 254 aa18.83■□□□□ 0.6
LYSMD3-202ENST00000453259 PAXIP1Q6ZW49 1069 aaPredicted RBP18.82■□□□□ 0.6
LYSMD3-202ENST00000453259 SP8Q8IXZ3 490 aa18.82■□□□□ 0.6
LYSMD3-202ENST00000453259 KIAA2012Q0VF49 1180 aa18.81■□□□□ 0.6
LYSMD3-202ENST00000453259 TNIP1Q15025 636 aa18.81■□□□□ 0.6
LYSMD3-202ENST00000453259 AOC3Q16853 763 aa18.81■□□□□ 0.6
LYSMD3-202ENST00000453259 LRP10Q7Z4F1 713 aa18.81■□□□□ 0.6
LYSMD3-202ENST00000453259 SAPCD2Q86UD0 394 aa18.81■□□□□ 0.6
LYSMD3-202ENST00000453259 ABCC4O15439 1325 aa18.8■□□□□ 0.6
LYSMD3-202ENST00000453259 BRPF1P55201 1214 aaPredicted RBP18.8■□□□□ 0.6
LYSMD3-202ENST00000453259 CXCL9Q07325 125 aa18.8■□□□□ 0.6
LYSMD3-202ENST00000453259 CYP4F22Q6NT55 531 aa18.8■□□□□ 0.6
LYSMD3-202ENST00000453259 DPP8Q6V1X1 898 aaPredicted RBP18.8■□□□□ 0.6
LYSMD3-202ENST00000453259 ANKRD36CQ5JPF3 1778 aa18.8■□□□□ 0.6
LYSMD3-202ENST00000453259 CIAPIN1Q6FI81 312 aa18.79■□□□□ 0.6
LYSMD3-202ENST00000453259 C3orf67Q6ZVT6 689 aa18.79■□□□□ 0.6
LYSMD3-202ENST00000453259 TSPYL4Q9UJ04 414 aa18.79■□□□□ 0.6
LYSMD3-202ENST00000453259 TRAF5O00463 557 aa18.78■□□□□ 0.6
LYSMD3-202ENST00000453259 RGS19P49795 217 aa18.78■□□□□ 0.6
LYSMD3-202ENST00000453259 GMPSP49915 693 aaPredicted RBP18.78■□□□□ 0.6
LYSMD3-202ENST00000453259 LMOD3Q0VAK6 560 aa18.78■□□□□ 0.6
LYSMD3-202ENST00000453259 PDIA6Q15084 440 aa18.78■□□□□ 0.6
LYSMD3-202ENST00000453259 MPNDQ8N594 471 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms