RNA–Protein interactions for RNA: ENST00000452322.2

LINC00339-205, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 1,391 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-205ENST00000452322 NTSR2O95665 410 aa15.08■□□□□ 0
LINC00339-205ENST00000452322 CWF19L2Q2TBE0 894 aaKnown RBP15.08■□□□□ 0
LINC00339-205ENST00000452322 TPTE2Q6XPS3 522 aa15.08■□□□□ 0
LINC00339-205ENST00000452322 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.08■□□□□ 0
LINC00339-205ENST00000452322 CWC25Q9NXE8 425 aaPredicted RBP15.08■□□□□ 0
LINC00339-205ENST00000452322 ALDH1L1O75891 902 aa15.07■□□□□ 0
LINC00339-205ENST00000452322 PRR5LQ6MZQ0 368 aa15.07■□□□□ 0
LINC00339-205ENST00000452322 CNBD1Q8NA66 436 aa15.07■□□□□ 0
LINC00339-205ENST00000452322 UTP14AQ9BVJ6 771 aaKnown RBP15.07■□□□□ 0
LINC00339-205ENST00000452322 SRCIN1Q9C0H9 1055 aa15.07■□□□□ 0
LINC00339-205ENST00000452322 FAM177BA6PVY3 158 aa15.06■□□□□ 0
LINC00339-205ENST00000452322 CCT4P50991 539 aaKnown RBP15.06■□□□□ 0
LINC00339-205ENST00000452322 TRMT112Q9UI30 125 aaKnown RBP15.06■□□□□ 0
LINC00339-205ENST00000452322 C10orf71Q711Q0 1435 aa15.06■□□□□ 0
LINC00339-205ENST00000452322 NPHP1O15259 732 aa15.05■□□□□ -0
LINC00339-205ENST00000452322 MS4A1P11836 297 aa15.05■□□□□ -0
LINC00339-205ENST00000452322 ST5P78524 1137 aa15.05■□□□□ -0
LINC00339-205ENST00000452322 GCKRQ14397 625 aa15.05■□□□□ -0
LINC00339-205ENST00000452322 ZBTB38Q8NAP3 1195 aaPredicted RBP15.05■□□□□ -0
LINC00339-205ENST00000452322 TNNQ9UQP3 1299 aa15.05■□□□□ -0
LINC00339-205ENST00000452322 SH3TC1Q8TE82 1336 aa15.04■□□□□ -0
LINC00339-205ENST00000452322 KIF13BQ9NQT8 1826 aa15.04■□□□□ -0
LINC00339-205ENST00000452322 RIC1Q4ADV7 1423 aa15.04■□□□□ -0
LINC00339-205ENST00000452322 PCCAP05165 728 aaPredicted RBP15.04■□□□□ -0
LINC00339-205ENST00000452322 GTF2E1P29083 439 aaPredicted RBP15.04■□□□□ -0
LINC00339-205ENST00000452322 INTS3Q68E01 1043 aaKnown RBP15.04■□□□□ -0
LINC00339-205ENST00000452322 NUTM1Q86Y26 1132 aa15.04■□□□□ -0
LINC00339-205ENST00000452322 FTSJ3Q8IY81 847 aaKnown RBP15.04■□□□□ -0
LINC00339-205ENST00000452322 DZIP1LQ8IYY4 767 aaKnown RBP15.04■□□□□ -0
LINC00339-205ENST00000452322 CLUAP1Q96AJ1 413 aa15.04■□□□□ -0
LINC00339-205ENST00000452322 PLIN1O60240 522 aa15.03■□□□□ -0
LINC00339-205ENST00000452322 RRP1P56182 461 aaKnown RBP15.03■□□□□ -0
LINC00339-205ENST00000452322 ERFEQ4G0M1 354 aa15.03■□□□□ -0
LINC00339-205ENST00000452322 PPP1R1BQ9UD71 204 aaPredicted RBP15.03■□□□□ -0
LINC00339-205ENST00000452322 ABCC12Q96J65 1359 aa15.03■□□□□ -0
LINC00339-205ENST00000452322 H7C1W4 665 aa15.02■□□□□ -0
LINC00339-205ENST00000452322 GRM8O00222 908 aa15.02■□□□□ -0
LINC00339-205ENST00000452322 FAM89AQ96GI7 184 aa15.02■□□□□ -0
LINC00339-205ENST00000452322 BRIP1Q9BX63 1249 aa15.02■□□□□ -0
LINC00339-205ENST00000452322 CD2APQ9Y5K6 639 aa15.02■□□□□ -0
LINC00339-205ENST00000452322 LAMB2P55268 1798 aa15.02□□□□□ -0.01
LINC00339-205ENST00000452322 ANKRD31Q8N7Z5 1873 aa15.02□□□□□ -0.01
LINC00339-205ENST00000452322 CDHR2Q9BYE9 1310 aa15.02□□□□□ -0.01
LINC00339-205ENST00000452322 RLBP1P12271 317 aa15.01□□□□□ -0.01
LINC00339-205ENST00000452322 HSP90B1P14625 803 aaKnown RBP15.01□□□□□ -0.01
LINC00339-205ENST00000452322 PDE3AQ14432 1141 aa15.01□□□□□ -0.01
LINC00339-205ENST00000452322 SLC10A5Q5PT55 438 aa15.01□□□□□ -0.01
LINC00339-205ENST00000452322 CCDC24Q8N4L8 307 aa15.01□□□□□ -0.01
LINC00339-205ENST00000452322 TMEM57Q8N5G2 664 aa15.01□□□□□ -0.01
LINC00339-205ENST00000452322 C9orf78Q9NZ63 289 aaPredicted RBP15.01□□□□□ -0.01
LINC00339-205ENST00000452322 DDX60Q8IY21 1712 aaKnown RBP15.01□□□□□ -0.01
LINC00339-205ENST00000452322 UTYO14607 1347 aa15.01□□□□□ -0.01
LINC00339-205ENST00000452322 TNRC6CQ9HCJ0 1690 aaKnown RBP15.01□□□□□ -0.01
LINC00339-205ENST00000452322 IRS4O14654 1257 aaPredicted RBP15□□□□□ -0.01
LINC00339-205ENST00000452322 CASP7P55210 303 aa15□□□□□ -0.01
LINC00339-205ENST00000452322 RTL5Q5HYW3 569 aaPredicted RBP15□□□□□ -0.01
LINC00339-205ENST00000452322 UBE3BQ7Z3V4 1068 aa15□□□□□ -0.01
LINC00339-205ENST00000452322 SYNE4Q8N205 404 aa15□□□□□ -0.01
LINC00339-205ENST00000452322 CENPBP07199 599 aaPredicted RBP14.99□□□□□ -0.01
LINC00339-205ENST00000452322 PDE6BP35913 854 aa14.99□□□□□ -0.01
LINC00339-205ENST00000452322 PANK1Q8TE04 598 aa14.99□□□□□ -0.01
LINC00339-205ENST00000452322 USP44Q9H0E7 712 aa14.99□□□□□ -0.01
LINC00339-205ENST00000452322 PDZRN3Q9UPQ7 1066 aa14.99□□□□□ -0.01
LINC00339-205ENST00000452322 KIAA1551Q9HCM1 1747 aa14.99□□□□□ -0.01
LINC00339-205ENST00000452322 KLRG2A4D1S0 409 aaPredicted RBP14.98□□□□□ -0.01
LINC00339-205ENST00000452322 NBPF7P0C2Y1 421 aaPredicted RBP14.98□□□□□ -0.01
LINC00339-205ENST00000452322 TGFB2P61812 414 aa14.98□□□□□ -0.01
LINC00339-205ENST00000452322 KLHL34Q8N239 644 aa14.98□□□□□ -0.01
LINC00339-205ENST00000452322 JARID2Q92833 1246 aaPredicted RBP14.98□□□□□ -0.01
LINC00339-205ENST00000452322 NLRP3Q96P20 1036 aa14.98□□□□□ -0.01
LINC00339-205ENST00000452322 FHDC1Q9C0D6 1143 aaPredicted RBP14.98□□□□□ -0.01
LINC00339-205ENST00000452322 PDE8AO60658 829 aa14.98□□□□□ -0.01
LINC00339-205ENST00000452322 HCLS1P14317 486 aaPredicted RBP14.98□□□□□ -0.01
LINC00339-205ENST00000452322 MVPQ14764 893 aaKnown RBP14.98□□□□□ -0.01
LINC00339-205ENST00000452322 ITPRIPQ8IWB1 547 aa14.98□□□□□ -0.01
LINC00339-205ENST00000452322 PLA2G12BQ9BX93 195 aa14.98□□□□□ -0.01
LINC00339-205ENST00000452322 SUPT16HQ9Y5B9 1047 aaKnown RBP14.98□□□□□ -0.01
LINC00339-205ENST00000452322 COL11A2P13942 1736 aaPredicted RBP14.97□□□□□ -0.01
LINC00339-205ENST00000452322 DLEC1Q9Y238 1755 aa14.97□□□□□ -0.01
LINC00339-205ENST00000452322 CRY2Q49AN0 593 aa14.97□□□□□ -0.01
LINC00339-205ENST00000452322 C20orf194Q5TEA3 1177 aa14.97□□□□□ -0.01
LINC00339-205ENST00000452322 MEIS3Q99687 375 aa14.97□□□□□ -0.01
LINC00339-205ENST00000452322 MYH3P11055 1940 aa14.96□□□□□ -0.01
LINC00339-205ENST00000452322 H0YIN7 160 aa14.96□□□□□ -0.02
LINC00339-205ENST00000452322 GNAI3P08754 354 aa14.96□□□□□ -0.02
LINC00339-205ENST00000452322 UBTFL1P0CB47 393 aaPredicted RBP14.96□□□□□ -0.02
LINC00339-205ENST00000452322 SRGNP10124 158 aa14.96□□□□□ -0.02
LINC00339-205ENST00000452322 SF3B3Q15393 1217 aaKnown RBP14.96□□□□□ -0.02
LINC00339-205ENST00000452322 C3orf67Q6ZVT6 689 aa14.96□□□□□ -0.02
LINC00339-205ENST00000452322 C2CD5Q86YS7 1000 aa14.96□□□□□ -0.02
LINC00339-205ENST00000452322 SYT17Q9BSW7 474 aa14.96□□□□□ -0.02
LINC00339-205ENST00000452322 DDX19BQ9UMR2 479 aa14.96□□□□□ -0.02
LINC00339-205ENST00000452322 HDAC5Q9UQL6 1122 aa14.96□□□□□ -0.02
LINC00339-205ENST00000452322 COG6Q9Y2V7 657 aa14.96□□□□□ -0.02
LINC00339-205ENST00000452322 CTSWP56202 376 aa14.95□□□□□ -0.02
LINC00339-205ENST00000452322 SUCLG2Q96I99 432 aa14.95□□□□□ -0.02
LINC00339-205ENST00000452322 ZBTB7BO15156 539 aaPredicted RBP14.94□□□□□ -0.02
LINC00339-205ENST00000452322 NPR1P16066 1061 aa14.94□□□□□ -0.02
LINC00339-205ENST00000452322 DPEP1P16444 411 aa14.94□□□□□ -0.02
LINC00339-205ENST00000452322 CHRNA5P30532 468 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms