RNA–Protein interactions for RNA: ENST00000452140.5

VPS8-211, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 392 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-211ENST00000452140 ANKIB1Q9P2G1 1089 aa6.89□□□□□ -1.31
VPS8-211ENST00000452140 TYRO3Q06418 890 aa6.88□□□□□ -1.31
VPS8-211ENST00000452140 IER5Q5VY09 327 aa6.88□□□□□ -1.31
VPS8-211ENST00000452140 CEP63Q96MT8 703 aa6.88□□□□□ -1.31
VPS8-211ENST00000452140 DCDC2BA2VCK2 349 aa6.87□□□□□ -1.31
VPS8-211ENST00000452140 MZF1P28698 734 aaPredicted RBP6.87□□□□□ -1.31
VPS8-211ENST00000452140 GRNP28799 593 aaKnown RBP6.87□□□□□ -1.31
VPS8-211ENST00000452140 INPP5BP32019 993 aa6.87□□□□□ -1.31
VPS8-211ENST00000452140 ARSDP51689 593 aa6.87□□□□□ -1.31
VPS8-211ENST00000452140 DBN1Q16643 649 aa6.87□□□□□ -1.31
VPS8-211ENST00000452140 C8orf34Q49A92 452 aa6.87□□□□□ -1.31
VPS8-211ENST00000452140 EFHC2Q5JST6 749 aa6.87□□□□□ -1.31
VPS8-211ENST00000452140 NPAS4Q8IUM7 802 aa6.87□□□□□ -1.31
VPS8-211ENST00000452140 ZSCAN29Q8IWY8 852 aaPredicted RBP6.87□□□□□ -1.31
VPS8-211ENST00000452140 RBCK1Q9BYM8 510 aa6.87□□□□□ -1.31
VPS8-211ENST00000452140 NUCKS1Q9H1E3 243 aaKnown RBP6.87□□□□□ -1.31
VPS8-211ENST00000452140 GPR182O15218 404 aa6.86□□□□□ -1.31
VPS8-211ENST00000452140 KCNMA1Q12791 1236 aa6.86□□□□□ -1.31
VPS8-211ENST00000452140 TRIP4Q15650 581 aaPredicted RBP6.86□□□□□ -1.31
VPS8-211ENST00000452140 CMTR1Q8N1G2 835 aaKnown RBP6.86□□□□□ -1.31
VPS8-211ENST00000452140 ZCCHC2Q9C0B9 1178 aaKnown RBP6.86□□□□□ -1.31
VPS8-211ENST00000452140 GGNBP2Q9H3C7 697 aa6.86□□□□□ -1.31
VPS8-211ENST00000452140 BRD7Q9NPI1 651 aa6.86□□□□□ -1.31
VPS8-211ENST00000452140 RTCBQ9Y3I0 505 aaKnown RBP6.86□□□□□ -1.31
VPS8-211ENST00000452140 RNF225M0QZC1 329 aaPredicted RBP6.85□□□□□ -1.31
VPS8-211ENST00000452140 KHNYNO15037 678 aaKnown RBP6.85□□□□□ -1.31
VPS8-211ENST00000452140 ITGA6P23229 1130 aa6.85□□□□□ -1.31
VPS8-211ENST00000452140 NLRP8Q86W28 1048 aa6.85□□□□□ -1.31
VPS8-211ENST00000452140 GJD3Q8N144 294 aa6.85□□□□□ -1.31
VPS8-211ENST00000452140 NANOS1Q8WY41 292 aaKnown RBP6.85□□□□□ -1.31
VPS8-211ENST00000452140 PIK3R5Q8WYR1 880 aa6.85□□□□□ -1.31
VPS8-211ENST00000452140 FAM129BQ96TA1 746 aa6.85□□□□□ -1.31
VPS8-211ENST00000452140 ATXN7O15265 892 aaPredicted RBP6.84□□□□□ -1.31
VPS8-211ENST00000452140 IGHA2P01877 340 aa6.84□□□□□ -1.31
VPS8-211ENST00000452140 RBM25P49756 843 aaKnown RBP6.84□□□□□ -1.31
VPS8-211ENST00000452140 TAGLNQ01995 201 aaKnown RBP6.84□□□□□ -1.31
VPS8-211ENST00000452140 UBAP2LQ14157 1087 aaKnown RBP6.84□□□□□ -1.31
VPS8-211ENST00000452140 GRIN2CQ14957 1233 aa6.84□□□□□ -1.31
VPS8-211ENST00000452140 NPM2Q86SE8 214 aaKnown RBP6.84□□□□□ -1.31
VPS8-211ENST00000452140 TRIM22Q8IYM9 498 aa6.84□□□□□ -1.31
VPS8-211ENST00000452140 ZNF837Q96EG3 531 aaPredicted RBP6.84□□□□□ -1.31
VPS8-211ENST00000452140 CNTNAP3BQ96NU0 1288 aa6.84□□□□□ -1.31
VPS8-211ENST00000452140 BCL2L13Q9BXK5 485 aa6.84□□□□□ -1.31
VPS8-211ENST00000452140 CNTNAP3Q9BZ76 1288 aa6.84□□□□□ -1.31
VPS8-211ENST00000452140 NIF3L1Q9GZT8 377 aa6.84□□□□□ -1.31
VPS8-211ENST00000452140 FAM13BQ9NYF5 915 aa6.84□□□□□ -1.31
VPS8-211ENST00000452140 KCNMB2Q9Y691 235 aa6.84□□□□□ -1.31
VPS8-211ENST00000452140 CDC14CA4D256 554 aa6.83□□□□□ -1.32
VPS8-211ENST00000452140 GPR25O00155 361 aa6.83□□□□□ -1.32
VPS8-211ENST00000452140 TREHO43280 583 aa6.83□□□□□ -1.32
VPS8-211ENST00000452140 P4HBP07237 508 aaKnown RBP6.83□□□□□ -1.32
VPS8-211ENST00000452140 PCSK2P16519 638 aa6.83□□□□□ -1.32
VPS8-211ENST00000452140 SFSWAPQ12872 951 aaKnown RBP6.83□□□□□ -1.32
VPS8-211ENST00000452140 SAMD5Q5TGI4 173 aa6.83□□□□□ -1.32
VPS8-211ENST00000452140 GPR161Q8N6U8 529 aaKnown RBP6.83□□□□□ -1.32
VPS8-211ENST00000452140 TTC16Q8NEE8 873 aa6.83□□□□□ -1.32
VPS8-211ENST00000452140 GIPC2Q8TF65 315 aa6.83□□□□□ -1.32
VPS8-211ENST00000452140 GTPBP3Q969Y2 492 aaKnown RBP6.83□□□□□ -1.32
VPS8-211ENST00000452140 ABHD17AQ96GS6 310 aa6.83□□□□□ -1.32
VPS8-211ENST00000452140 STRN4Q9NRL3 753 aa6.83□□□□□ -1.32
VPS8-211ENST00000452140 HCN2Q9UL51 889 aa6.83□□□□□ -1.32
VPS8-211ENST00000452140 PCDHGC4Q9Y5F7 938 aa6.83□□□□□ -1.32
VPS8-211ENST00000452140 UBAP1LF5GYI3 381 aa6.82□□□□□ -1.32
VPS8-211ENST00000452140 H7C1W4 665 aa6.82□□□□□ -1.32
VPS8-211ENST00000452140 BNIP3LO60238 219 aa6.82□□□□□ -1.32
VPS8-211ENST00000452140 ERCC3P19447 782 aa6.82□□□□□ -1.32
VPS8-211ENST00000452140 USP5P45974 858 aa6.82□□□□□ -1.32
VPS8-211ENST00000452140 MAPK8P45983 427 aa6.82□□□□□ -1.32
VPS8-211ENST00000452140 PDE3BQ13370 1112 aa6.82□□□□□ -1.32
VPS8-211ENST00000452140 LBRQ14739 615 aaKnown RBP6.82□□□□□ -1.32
VPS8-211ENST00000452140 FIGNL1Q6PIW4 674 aa6.82□□□□□ -1.32
VPS8-211ENST00000452140 TMEM151AQ8N4L1 468 aa6.82□□□□□ -1.32
VPS8-211ENST00000452140 DMRTB1Q96MA1 342 aa6.82□□□□□ -1.32
VPS8-211ENST00000452140 CITED4Q96RK1 184 aa6.82□□□□□ -1.32
VPS8-211ENST00000452140 COL25A1Q9BXS0 654 aaPredicted RBP6.82□□□□□ -1.32
VPS8-211ENST00000452140 EFSO43281 561 aa6.81□□□□□ -1.32
VPS8-211ENST00000452140 XYLBO75191 536 aa6.81□□□□□ -1.32
VPS8-211ENST00000452140 FAM157BP0CG42 384 aa6.81□□□□□ -1.32
VPS8-211ENST00000452140 MAPTP10636 758 aaKnown RBP6.81□□□□□ -1.32
VPS8-211ENST00000452140 EPB42P16452 691 aa6.81□□□□□ -1.32
VPS8-211ENST00000452140 CD33P20138 364 aa6.81□□□□□ -1.32
VPS8-211ENST00000452140 KRT76Q01546 638 aa6.81□□□□□ -1.32
VPS8-211ENST00000452140 TNP2Q05952 138 aa6.81□□□□□ -1.32
VPS8-211ENST00000452140 EHHADHQ08426 723 aa6.81□□□□□ -1.32
VPS8-211ENST00000452140 ORC1Q13415 861 aa6.81□□□□□ -1.32
VPS8-211ENST00000452140 DSC3Q14574 896 aa6.81□□□□□ -1.32
VPS8-211ENST00000452140 KRT25Q7Z3Z0 450 aa6.81□□□□□ -1.32
VPS8-211ENST00000452140 ZNF438Q7Z4V0 828 aa6.81□□□□□ -1.32
VPS8-211ENST00000452140 FBXO33Q7Z6M2 555 aa6.81□□□□□ -1.32
VPS8-211ENST00000452140 RAB44Q7Z6P3 723 aaPredicted RBP6.81□□□□□ -1.32
VPS8-211ENST00000452140 SETDB2Q96T68 719 aa6.81□□□□□ -1.32
VPS8-211ENST00000452140 FOXD3Q9UJU5 478 aaPredicted RBP6.81□□□□□ -1.32
VPS8-211ENST00000452140 ADAMTS8Q9UP79 889 aa6.81□□□□□ -1.32
VPS8-211ENST00000452140 KCNH4Q9UQ05 1017 aa6.81□□□□□ -1.32
VPS8-211ENST00000452140 GDF11O95390 407 aa6.8□□□□□ -1.32
VPS8-211ENST00000452140 PLCB3Q01970 1234 aa6.8□□□□□ -1.32
VPS8-211ENST00000452140 FMR1Q06787 632 aaKnown RBP eCLIP6.8□□□□□ -1.32
VPS8-211ENST00000452140 SV2AQ7L0J3 742 aa6.8□□□□□ -1.32
VPS8-211ENST00000452140 VWA5B2Q8N398 1253 aa6.8□□□□□ -1.32
VPS8-211ENST00000452140 NDFIP2Q9NV92 336 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms