RNA–Protein interactions for RNA: ENST00000451998.1

TTC38-205, Transcript of tetratricopeptide repeat domain 38, humanhuman

TSL 2

Gene TTC38, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38-205ENST00000451998 GLTPD2A6NH11 291 aa20.45■□□□□ 0.86
TTC38-205ENST00000451998 ALDH1B1P30837 517 aa20.45■□□□□ 0.86
TTC38-205ENST00000451998 HSP90AB3PQ58FF7 597 aa20.45■□□□□ 0.86
TTC38-205ENST00000451998 HOXB7P09629 217 aa20.44■□□□□ 0.86
TTC38-205ENST00000451998 C7orf43Q8WVR3 580 aa20.44■□□□□ 0.86
TTC38-205ENST00000451998 RBM17Q96I25 401 aaKnown RBP20.44■□□□□ 0.86
TTC38-205ENST00000451998 LTBP3Q9NS15 1303 aa20.44■□□□□ 0.86
TTC38-205ENST00000451998 HCLS1P14317 486 aaPredicted RBP20.43■□□□□ 0.86
TTC38-205ENST00000451998 FKBP4Q02790 459 aaKnown RBP eCLIP20.43■□□□□ 0.86
TTC38-205ENST00000451998 CRY2Q49AN0 593 aa20.43■□□□□ 0.86
TTC38-205ENST00000451998 DPY19L2Q6NUT2 758 aa20.43■□□□□ 0.86
TTC38-205ENST00000451998 SLC51AQ86UW1 340 aa20.43■□□□□ 0.86
TTC38-205ENST00000451998 DBF4Q9UBU7 674 aaPredicted RBP20.43■□□□□ 0.86
TTC38-205ENST00000451998 ZNF853P0CG23 659 aa20.42■□□□□ 0.86
TTC38-205ENST00000451998 NLRP10Q86W26 655 aa20.42■□□□□ 0.86
TTC38-205ENST00000451998 RBM46Q8TBY0 533 aaKnown RBP20.42■□□□□ 0.86
TTC38-205ENST00000451998 TRMT112Q9UI30 125 aaKnown RBP20.42■□□□□ 0.86
TTC38-205ENST00000451998 SALL2Q9Y467 1007 aaPredicted RBP20.42■□□□□ 0.86
TTC38-205ENST00000451998 ATP5J2-PTCD1G3V325 749 aa20.41■□□□□ 0.86
TTC38-205ENST00000451998 PPEF1O14829 653 aaPredicted RBP20.41■□□□□ 0.86
TTC38-205ENST00000451998 TCIRG1Q13488 830 aa20.41■□□□□ 0.86
TTC38-205ENST00000451998 RTKN2Q8IZC4 609 aa20.41■□□□□ 0.86
TTC38-205ENST00000451998 SYNE4Q8N205 404 aa20.41■□□□□ 0.86
TTC38-205ENST00000451998 TSR2Q969E8 191 aaKnown RBP20.41■□□□□ 0.86
TTC38-205ENST00000451998 NLRP3Q96P20 1036 aa20.41■□□□□ 0.86
TTC38-205ENST00000451998 ARFGEF2Q9Y6D5 1785 aa20.41■□□□□ 0.86
TTC38-205ENST00000451998 FER1L6Q2WGJ9 1857 aa20.4■□□□□ 0.86
TTC38-205ENST00000451998 PLBD2Q8NHP8 589 aa20.4■□□□□ 0.86
TTC38-205ENST00000451998 HYPKQ9NX55 129 aa20.4■□□□□ 0.86
TTC38-205ENST00000451998 RIC1Q4ADV7 1423 aa20.39■□□□□ 0.85
TTC38-205ENST00000451998 DDNO94850 711 aaPredicted RBP20.39■□□□□ 0.85
TTC38-205ENST00000451998 VEGFAP15692 232 aaPredicted RBP20.39■□□□□ 0.85
TTC38-205ENST00000451998 GOLGA2Q08379 1002 aa20.39■□□□□ 0.85
TTC38-205ENST00000451998 RTL5Q5HYW3 569 aaPredicted RBP20.39■□□□□ 0.85
TTC38-205ENST00000451998 ANKRD13DQ6ZTN6 518 aa20.39■□□□□ 0.85
TTC38-205ENST00000451998 C8orf58Q8NAV2 365 aa20.39■□□□□ 0.85
TTC38-205ENST00000451998 SH3TC1Q8TE82 1336 aa20.38■□□□□ 0.85
TTC38-205ENST00000451998 RIC3Q7Z5B4 369 aa20.38■□□□□ 0.85
TTC38-205ENST00000451998 PHAXQ9H814 394 aaKnown RBP20.38■□□□□ 0.85
TTC38-205ENST00000451998 ZNF541Q9H0D2 1346 aa20.37■□□□□ 0.85
TTC38-205ENST00000451998 HOXA10P31260 410 aaPredicted RBP20.37■□□□□ 0.85
TTC38-205ENST00000451998 IARSP41252 1262 aaKnown RBP20.37■□□□□ 0.85
TTC38-205ENST00000451998 APLP1P51693 650 aa20.37■□□□□ 0.85
TTC38-205ENST00000451998 SMC1BQ8NDV3 1235 aa20.37■□□□□ 0.85
TTC38-205ENST00000451998 CRAMP1Q96RY5 1269 aa20.37■□□□□ 0.85
TTC38-205ENST00000451998 TMX4Q9H1E5 349 aaPredicted RBP20.37■□□□□ 0.85
TTC38-205ENST00000451998 CCDC88AQ3V6T2 1871 aa20.37■□□□□ 0.85
TTC38-205ENST00000451998 TSPYL6Q8N831 410 aa20.36■□□□□ 0.85
TTC38-205ENST00000451998 ABCC4O15439 1325 aa20.35■□□□□ 0.85
TTC38-205ENST00000451998 RNF123Q5XPI4 1314 aa20.35■□□□□ 0.85
TTC38-205ENST00000451998 HTRA3P83110 453 aa20.35■□□□□ 0.85
TTC38-205ENST00000451998 FSTL1Q12841 308 aa20.35■□□□□ 0.85
TTC38-205ENST00000451998 WWC1Q8IX03 1113 aa20.35■□□□□ 0.85
TTC38-205ENST00000451998 FAM9BQ8IZU0 186 aa20.35■□□□□ 0.85
TTC38-205ENST00000451998 SLC10A5Q5PT55 438 aa20.34■□□□□ 0.85
TTC38-205ENST00000451998 DDX46Q7L014 1031 aaKnown RBP20.34■□□□□ 0.85
TTC38-205ENST00000451998 FAM89AQ96GI7 184 aa20.34■□□□□ 0.85
TTC38-205ENST00000451998 MYD88Q99836 296 aa20.34■□□□□ 0.85
TTC38-205ENST00000451998 ANKRD36CQ5JPF3 1778 aa20.34■□□□□ 0.85
TTC38-205ENST00000451998 POTECB2RU33 542 aa20.33■□□□□ 0.85
TTC38-205ENST00000451998 CCDC30Q5VVM6 783 aa20.33■□□□□ 0.85
TTC38-205ENST00000451998 CC2D2BQ6DHV5 1058 aa20.33■□□□□ 0.85
TTC38-205ENST00000451998 LARGE2Q8N3Y3 721 aa20.33■□□□□ 0.85
TTC38-205ENST00000451998 JDP2Q8WYK2 163 aa20.33■□□□□ 0.85
TTC38-205ENST00000451998 PSMD1Q99460 953 aa20.32■□□□□ 0.84
TTC38-205ENST00000451998 ISCA1Q9BUE6 129 aa20.32■□□□□ 0.84
TTC38-205ENST00000451998 CCDC27Q2M243 656 aa20.31■□□□□ 0.84
TTC38-205ENST00000451998 STK31Q9BXU1 1019 aa20.31■□□□□ 0.84
TTC38-205ENST00000451998 GJA3Q9Y6H8 435 aa20.31■□□□□ 0.84
TTC38-205ENST00000451998 PPIP5K2O43314 1243 aa20.3■□□□□ 0.84
TTC38-205ENST00000451998 EAPPQ56P03 285 aaPredicted RBP20.3■□□□□ 0.84
TTC38-205ENST00000451998 JARID2Q92833 1246 aaPredicted RBP20.3■□□□□ 0.84
TTC38-205ENST00000451998 ATP6V0A2Q9Y487 856 aa20.3■□□□□ 0.84
TTC38-205ENST00000451998 WDR90Q96KV7 1748 aa20.3■□□□□ 0.84
TTC38-205ENST00000451998 SNED1Q8TER0 1413 aa20.29■□□□□ 0.84
TTC38-205ENST00000451998 IRS4O14654 1257 aaPredicted RBP20.29■□□□□ 0.84
TTC38-205ENST00000451998 DDX58O95786 925 aaKnown RBP20.29■□□□□ 0.84
TTC38-205ENST00000451998 POTEIP0CG38 1075 aa20.29■□□□□ 0.84
TTC38-205ENST00000451998 POTEJP0CG39 1038 aa20.29■□□□□ 0.84
TTC38-205ENST00000451998 GRAPQ13588 217 aa20.29■□□□□ 0.84
TTC38-205ENST00000451998 AOC3Q16853 763 aa20.29■□□□□ 0.84
TTC38-205ENST00000451998 TWISTNBQ3B726 338 aaPredicted RBP20.29■□□□□ 0.84
TTC38-205ENST00000451998 GRAPLQ8TC17 118 aaPredicted RBP20.29■□□□□ 0.84
TTC38-205ENST00000451998 DICER1Q9UPY3 1922 aaKnown RBP20.29■□□□□ 0.84
TTC38-205ENST00000451998 IQCA1LA6NCM1 817 aa20.28■□□□□ 0.84
TTC38-205ENST00000451998 EIF6P56537 245 aaKnown RBP20.28■□□□□ 0.84
TTC38-205ENST00000451998 DPP8Q6V1X1 898 aaPredicted RBP20.28■□□□□ 0.84
TTC38-205ENST00000451998 NIM1KQ8IY84 436 aa20.28■□□□□ 0.84
TTC38-205ENST00000451998 FANCIQ9NVI1 1328 aa20.27■□□□□ 0.84
TTC38-205ENST00000451998 CHMP4AQ9BY43 222 aa20.27■□□□□ 0.84
TTC38-205ENST00000451998 MAP3K2Q9Y2U5 619 aa20.27■□□□□ 0.84
TTC38-205ENST00000451998 COL4A5P29400 1685 aa20.26■□□□□ 0.83
TTC38-205ENST00000451998 FZD9O00144 591 aa20.26■□□□□ 0.83
TTC38-205ENST00000451998 BBOX1O75936 387 aa20.26■□□□□ 0.83
TTC38-205ENST00000451998 GRIPAP1Q4V328 841 aa20.26■□□□□ 0.83
TTC38-205ENST00000451998 MPNDQ8N594 471 aa20.26■□□□□ 0.83
TTC38-205ENST00000451998 CCDC85AQ96PX6 553 aaPredicted RBP20.26■□□□□ 0.83
TTC38-205ENST00000451998 HACL1Q9UJ83 578 aa20.26■□□□□ 0.83
TTC38-205ENST00000451998 CLEC11AQ9Y240 323 aa20.26■□□□□ 0.83
TTC38-205ENST00000451998 IL16Q14005 1332 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms