RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 FAM177BA6PVY3 158 aa20.79■□□□□ 0.92
SGCE-208ENST00000450385 NTSR2O95665 410 aa20.79■□□□□ 0.92
SGCE-208ENST00000450385 VEGFAP15692 232 aaPredicted RBP20.79■□□□□ 0.92
SGCE-208ENST00000450385 FSTL1Q12841 308 aa20.79■□□□□ 0.92
SGCE-208ENST00000450385 ERFEQ4G0M1 354 aa20.79■□□□□ 0.92
SGCE-208ENST00000450385 DUSP27Q5VZP5 1158 aa20.79■□□□□ 0.92
SGCE-208ENST00000450385 XAGE3Q8WTP9 111 aa20.79■□□□□ 0.92
SGCE-208ENST00000450385 NLRP3Q96P20 1036 aa20.79■□□□□ 0.92
SGCE-208ENST00000450385 CRAMP1Q96RY5 1269 aa20.79■□□□□ 0.92
SGCE-208ENST00000450385 ANKRD36CQ5JPF3 1778 aa20.79■□□□□ 0.92
SGCE-208ENST00000450385 GPTP24298 496 aa20.78■□□□□ 0.92
SGCE-208ENST00000450385 PROSER3Q2NL68 480 aa20.78■□□□□ 0.92
SGCE-208ENST00000450385 ANKRD13DQ6ZTN6 518 aa20.78■□□□□ 0.92
SGCE-208ENST00000450385 PLBD2Q8NHP8 589 aa20.78■□□□□ 0.92
SGCE-208ENST00000450385 RPGRQ92834 1020 aaKnown RBP20.78■□□□□ 0.92
SGCE-208ENST00000450385 RBM17Q96I25 401 aaKnown RBP20.78■□□□□ 0.92
SGCE-208ENST00000450385 NMRK2Q9NPI5 230 aa20.78■□□□□ 0.92
SGCE-208ENST00000450385 PRELPP51888 382 aa20.77■□□□□ 0.92
SGCE-208ENST00000450385 FKBP4Q02790 459 aaKnown RBP eCLIP20.77■□□□□ 0.92
SGCE-208ENST00000450385 NUTM1Q86Y26 1132 aa20.77■□□□□ 0.92
SGCE-208ENST00000450385 CHPF2Q9P2E5 772 aa20.77■□□□□ 0.92
SGCE-208ENST00000450385 TIAM2Q8IVF5 1701 aa20.76■□□□□ 0.91
SGCE-208ENST00000450385 TRIM28Q13263 835 aaKnown RBP20.76■□□□□ 0.91
SGCE-208ENST00000450385 AIMP1Q12904 312 aaKnown RBP20.75■□□□□ 0.91
SGCE-208ENST00000450385 KRT24Q2M2I5 525 aa20.75■□□□□ 0.91
SGCE-208ENST00000450385 NLRP10Q86W26 655 aa20.75■□□□□ 0.91
SGCE-208ENST00000450385 NECTIN2Q92692 538 aa20.75■□□□□ 0.91
SGCE-208ENST00000450385 PSMD1Q99460 953 aa20.75■□□□□ 0.91
SGCE-208ENST00000450385 RRAGCQ9HB90 399 aa20.75■□□□□ 0.91
SGCE-208ENST00000450385 ZNF219Q9P2Y4 722 aaPredicted RBP20.75■□□□□ 0.91
SGCE-208ENST00000450385 IL16Q14005 1332 aa20.75■□□□□ 0.91
SGCE-208ENST00000450385 ANXA1P04083 346 aa20.74■□□□□ 0.91
SGCE-208ENST00000450385 TMX4Q9H1E5 349 aaPredicted RBP20.74■□□□□ 0.91
SGCE-208ENST00000450385 VPS33BQ9H267 617 aa20.74■□□□□ 0.91
SGCE-208ENST00000450385 MRS2Q9HD23 443 aa20.74■□□□□ 0.91
SGCE-208ENST00000450385 ABCC12Q96J65 1359 aa20.73■□□□□ 0.91
SGCE-208ENST00000450385 WDR90Q96KV7 1748 aa20.73■□□□□ 0.91
SGCE-208ENST00000450385 HSP90B1P14625 803 aaKnown RBP20.73■□□□□ 0.91
SGCE-208ENST00000450385 APLP1P51693 650 aa20.73■□□□□ 0.91
SGCE-208ENST00000450385 BBOX1O75936 387 aa20.72■□□□□ 0.91
SGCE-208ENST00000450385 CCDC30Q5VVM6 783 aa20.72■□□□□ 0.91
SGCE-208ENST00000450385 WWC1Q8IX03 1113 aa20.72■□□□□ 0.91
SGCE-208ENST00000450385 TRMT112Q9UI30 125 aaKnown RBP20.72■□□□□ 0.91
SGCE-208ENST00000450385 SH3TC1Q8TE82 1336 aa20.72■□□□□ 0.91
SGCE-208ENST00000450385 SMC1BQ8NDV3 1235 aa20.71■□□□□ 0.91
SGCE-208ENST00000450385 CACNA1FO60840 1977 aa20.71■□□□□ 0.91
SGCE-208ENST00000450385 CCDC184Q52MB2 194 aa20.7■□□□□ 0.9
SGCE-208ENST00000450385 TMC4Q7Z404 712 aa20.7■□□□□ 0.9
SGCE-208ENST00000450385 ISCA1Q9BUE6 129 aa20.7■□□□□ 0.9
SGCE-208ENST00000450385 DDX58O95786 925 aaKnown RBP20.69■□□□□ 0.9
SGCE-208ENST00000450385 GOLGA2Q08379 1002 aa20.69■□□□□ 0.9
SGCE-208ENST00000450385 WDR63Q8IWG1 891 aa20.69■□□□□ 0.9
SGCE-208ENST00000450385 SYNE4Q8N205 404 aa20.69■□□□□ 0.9
SGCE-208ENST00000450385 IQCA1LA6NCM1 817 aa20.68■□□□□ 0.9
SGCE-208ENST00000450385 IARSP41252 1262 aaKnown RBP20.68■□□□□ 0.9
SGCE-208ENST00000450385 SCN4AP35499 1836 aa20.68■□□□□ 0.9
SGCE-208ENST00000450385 PPEF1O14829 653 aaPredicted RBP20.67■□□□□ 0.9
SGCE-208ENST00000450385 DDX46Q7L014 1031 aaKnown RBP20.67■□□□□ 0.9
SGCE-208ENST00000450385 RIC3Q7Z5B4 369 aa20.67■□□□□ 0.9
SGCE-208ENST00000450385 C8orf58Q8NAV2 365 aa20.67■□□□□ 0.9
SGCE-208ENST00000450385 JDP2Q8WYK2 163 aa20.67■□□□□ 0.9
SGCE-208ENST00000450385 L3MBTL3Q96JM7 780 aaPredicted RBP20.67■□□□□ 0.9
SGCE-208ENST00000450385 ATP6V0A2Q9Y487 856 aa20.67■□□□□ 0.9
SGCE-208ENST00000450385 SNED1Q8TER0 1413 aa20.67■□□□□ 0.9
SGCE-208ENST00000450385 FZD9O00144 591 aa20.66■□□□□ 0.9
SGCE-208ENST00000450385 SUPT20HQ8NEM7 779 aa20.66■□□□□ 0.9
SGCE-208ENST00000450385 POTECB2RU33 542 aa20.65■□□□□ 0.9
SGCE-208ENST00000450385 SP8Q8IXZ3 490 aa20.65■□□□□ 0.9
SGCE-208ENST00000450385 CCDC191Q8NCU4 936 aa20.65■□□□□ 0.9
SGCE-208ENST00000450385 ZNF277Q9NRM2 450 aaPredicted RBP20.65■□□□□ 0.9
SGCE-208ENST00000450385 LAMB2P55268 1798 aa20.64■□□□□ 0.9
SGCE-208ENST00000450385 ELL2O00472 640 aaPredicted RBP20.64■□□□□ 0.89
SGCE-208ENST00000450385 SF3B3Q15393 1217 aaKnown RBP20.64■□□□□ 0.89
SGCE-208ENST00000450385 STK31Q9BXU1 1019 aa20.64■□□□□ 0.89
SGCE-208ENST00000450385 HCLS1P14317 486 aaPredicted RBP20.63■□□□□ 0.89
SGCE-208ENST00000450385 ZBTB38Q8NAP3 1195 aaPredicted RBP20.63■□□□□ 0.89
SGCE-208ENST00000450385 RTFDC1Q9BY42 306 aaPredicted RBP20.63■□□□□ 0.89
SGCE-208ENST00000450385 ABCC4O15439 1325 aa20.62■□□□□ 0.89
SGCE-208ENST00000450385 DDNO94850 711 aaPredicted RBP20.62■□□□□ 0.89
SGCE-208ENST00000450385 GRAPQ13588 217 aa20.62■□□□□ 0.89
SGCE-208ENST00000450385 C3orf67Q6ZVT6 689 aa20.62■□□□□ 0.89
SGCE-208ENST00000450385 GPC2Q8N158 579 aa20.62■□□□□ 0.89
SGCE-208ENST00000450385 GRAPLQ8TC17 118 aaPredicted RBP20.62■□□□□ 0.89
SGCE-208ENST00000450385 TWISTNBQ3B726 338 aaPredicted RBP20.61■□□□□ 0.89
SGCE-208ENST00000450385 OLFM4Q6UX06 510 aa20.61■□□□□ 0.89
SGCE-208ENST00000450385 METTL22Q9BUU2 404 aaPredicted RBP20.61■□□□□ 0.89
SGCE-208ENST00000450385 PHAXQ9H814 394 aaKnown RBP20.61■□□□□ 0.89
SGCE-208ENST00000450385 ATP5J2-PTCD1G3V325 749 aa20.6■□□□□ 0.89
SGCE-208ENST00000450385 EIF6P56537 245 aaKnown RBP20.6■□□□□ 0.89
SGCE-208ENST00000450385 KSR2Q6VAB6 950 aa20.6■□□□□ 0.89
SGCE-208ENST00000450385 FAM89AQ96GI7 184 aa20.6■□□□□ 0.89
SGCE-208ENST00000450385 DDX60Q8IY21 1712 aaKnown RBP20.6■□□□□ 0.89
SGCE-208ENST00000450385 PNMA8AQ86V59 439 aaPredicted RBP20.59■□□□□ 0.89
SGCE-208ENST00000450385 TSPYL6Q8N831 410 aa20.59■□□□□ 0.89
SGCE-208ENST00000450385 IRS4O14654 1257 aaPredicted RBP20.58■□□□□ 0.89
SGCE-208ENST00000450385 PCCAP05165 728 aaPredicted RBP20.58■□□□□ 0.89
SGCE-208ENST00000450385 NEXNQ0ZGT2 675 aa20.58■□□□□ 0.89
SGCE-208ENST00000450385 LARGE2Q8N3Y3 721 aa20.58■□□□□ 0.89
SGCE-208ENST00000450385 MPNDQ8N594 471 aa20.58■□□□□ 0.89
SGCE-208ENST00000450385 DNAJC5GQ8N7S2 189 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms