RNA–Protein interactions for RNA: ENST00000449833.6

SHANK2-211, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 8,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-211ENST00000449833 CNNM3Q8NE01 707 aa13.25□□□□□ -0.29
SHANK2-211ENST00000449833 SELENOOQ9BVL4 669 aa13.25□□□□□ -0.29
SHANK2-211ENST00000449833 ACTN2P35609 894 aa13.25□□□□□ -0.29
SHANK2-211ENST00000449833 TMEM266Q2M3C6 531 aa13.25□□□□□ -0.29
SHANK2-211ENST00000449833 CCDC12Q8WUD4 166 aaPredicted RBP13.25□□□□□ -0.29
SHANK2-211ENST00000449833 TTC12Q9H892 705 aaPredicted RBP13.25□□□□□ -0.29
SHANK2-211ENST00000449833 NUF2Q9BZD4 464 aa13.25□□□□□ -0.29
SHANK2-211ENST00000449833 SUPT6HQ7KZ85 1726 aaKnown RBP13.25□□□□□ -0.29
SHANK2-211ENST00000449833 NOP2P46087 812 aaKnown RBP13.25□□□□□ -0.29
SHANK2-211ENST00000449833 ATF7IPQ6VMQ6 1270 aa13.25□□□□□ -0.29
SHANK2-211ENST00000449833 MPHOSPH8Q99549 860 aa13.25□□□□□ -0.29
SHANK2-211ENST00000449833 SIL1Q9H173 461 aa13.25□□□□□ -0.29
SHANK2-211ENST00000449833 TRPC3Q13507 836 aa13.25□□□□□ -0.29
SHANK2-211ENST00000449833 ZBTB16Q05516 673 aa13.25□□□□□ -0.29
SHANK2-211ENST00000449833 TCP11L2Q8N4U5 519 aa13.25□□□□□ -0.29
SHANK2-211ENST00000449833 SEC62Q99442 399 aaKnown RBP13.25□□□□□ -0.29
SHANK2-211ENST00000449833 TMX1Q9H3N1 280 aa13.25□□□□□ -0.29
SHANK2-211ENST00000449833 VPS18Q9P253 973 aa13.24□□□□□ -0.29
SHANK2-211ENST00000449833 RAB3IPQ96QF0 476 aaPredicted RBP13.24□□□□□ -0.29
SHANK2-211ENST00000449833 USP25Q9UHP3 1055 aa13.24□□□□□ -0.29
SHANK2-211ENST00000449833 MTHFSP49914 203 aa13.24□□□□□ -0.29
SHANK2-211ENST00000449833 ERCC6LQ2NKX8 1250 aa13.24□□□□□ -0.29
SHANK2-211ENST00000449833 C8orf76Q96K31 380 aa13.24□□□□□ -0.29
SHANK2-211ENST00000449833 SLC4A2P04920 1241 aa13.24□□□□□ -0.29
SHANK2-211ENST00000449833 ATP2C2O75185 946 aa13.24□□□□□ -0.29
SHANK2-211ENST00000449833 KANK3Q6NY19 840 aa13.24□□□□□ -0.29
SHANK2-211ENST00000449833 RUFY3Q7L099 469 aa13.24□□□□□ -0.29
SHANK2-211ENST00000449833 TPD52P55327 224 aaPredicted RBP13.23□□□□□ -0.29
SHANK2-211ENST00000449833 UTP14CQ5TAP6 766 aaKnown RBP13.23□□□□□ -0.29
SHANK2-211ENST00000449833 APBB1IPQ7Z5R6 666 aaPredicted RBP13.23□□□□□ -0.29
SHANK2-211ENST00000449833 JAKMIP2Q96AA8 810 aa13.23□□□□□ -0.29
SHANK2-211ENST00000449833 PLEKHO1Q53GL0 409 aaPredicted RBP13.23□□□□□ -0.29
SHANK2-211ENST00000449833 CNPY4Q8N129 248 aa13.23□□□□□ -0.29
SHANK2-211ENST00000449833 RMDN2Q96LZ7 410 aa13.23□□□□□ -0.29
SHANK2-211ENST00000449833 CCDC77Q9BR77 488 aa13.23□□□□□ -0.29
SHANK2-211ENST00000449833 GON4LQ3T8J9 2241 aa13.23□□□□□ -0.29
SHANK2-211ENST00000449833 CETN3O15182 167 aa13.23□□□□□ -0.29
SHANK2-211ENST00000449833 AMPD3Q01432 767 aa13.23□□□□□ -0.29
SHANK2-211ENST00000449833 FAN1Q9Y2M0 1017 aa13.23□□□□□ -0.29
SHANK2-211ENST00000449833 TUBB2AQ13885 445 aa13.23□□□□□ -0.29
SHANK2-211ENST00000449833 AFAP1L1Q8TED9 768 aa13.23□□□□□ -0.29
SHANK2-211ENST00000449833 PRPF31Q8WWY3 499 aaKnown RBP13.23□□□□□ -0.29
SHANK2-211ENST00000449833 TUBB2BQ9BVA1 445 aa13.23□□□□□ -0.29
SHANK2-211ENST00000449833 Q9H521 79 aa13.23□□□□□ -0.29
SHANK2-211ENST00000449833 PSMC4P43686 418 aa13.23□□□□□ -0.29
SHANK2-211ENST00000449833 KIF5AQ12840 1032 aa13.23□□□□□ -0.29
SHANK2-211ENST00000449833 MTIF2P46199 727 aaKnown RBP13.22□□□□□ -0.29
SHANK2-211ENST00000449833 GNG11P61952 73 aa13.22□□□□□ -0.29
SHANK2-211ENST00000449833 NOLC1Q14978 699 aaKnown RBP eCLIP13.22□□□□□ -0.29
SHANK2-211ENST00000449833 VEZTQ9HBM0 779 aa13.22□□□□□ -0.29
SHANK2-211ENST00000449833 A0A087WZG4 1122 aa13.22□□□□□ -0.29
SHANK2-211ENST00000449833 USP5P45974 858 aa13.22□□□□□ -0.29
SHANK2-211ENST00000449833 HDGFL1Q5TGJ6 251 aa13.22□□□□□ -0.29
SHANK2-211ENST00000449833 BCAP29Q9UHQ4 241 aa13.22□□□□□ -0.29
SHANK2-211ENST00000449833 ZKSCAN5Q9Y2L8 839 aa13.22□□□□□ -0.29
SHANK2-211ENST00000449833 CNGA1P29973 690 aa13.22□□□□□ -0.29
SHANK2-211ENST00000449833 PPM1FP49593 454 aaPredicted RBP13.22□□□□□ -0.29
SHANK2-211ENST00000449833 NEDD9Q14511 834 aa13.22□□□□□ -0.29
SHANK2-211ENST00000449833 CAPZA3Q96KX2 299 aa13.22□□□□□ -0.29
SHANK2-211ENST00000449833 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.22□□□□□ -0.29
SHANK2-211ENST00000449833 SEPT8Q92599 483 aa13.22□□□□□ -0.29
SHANK2-211ENST00000449833 PPP1R12CQ9BZL4 782 aa13.22□□□□□ -0.29
SHANK2-211ENST00000449833 UBA5Q9GZZ9 404 aa13.22□□□□□ -0.29
SHANK2-211ENST00000449833 TOP2AP11388 1531 aaKnown RBP13.22□□□□□ -0.29
SHANK2-211ENST00000449833 PRPHP41219 470 aa13.22□□□□□ -0.29
SHANK2-211ENST00000449833 EXOSC9Q06265 439 aaKnown RBP13.22□□□□□ -0.29
SHANK2-211ENST00000449833 SLC4A8Q2Y0W8 1093 aa13.22□□□□□ -0.29
SHANK2-211ENST00000449833 MAP3K21Q5TCX8 1036 aa13.22□□□□□ -0.29
SHANK2-211ENST00000449833 MICAL1Q8TDZ2 1067 aa13.22□□□□□ -0.29
SHANK2-211ENST00000449833 LRRD1A4D1F6 860 aa13.22□□□□□ -0.29
SHANK2-211ENST00000449833 MYOM3Q5VTT5 1437 aa13.22□□□□□ -0.29
SHANK2-211ENST00000449833 PRC1O43663 620 aa13.21□□□□□ -0.29
SHANK2-211ENST00000449833 GIGYF1O75420 1035 aaPredicted RBP13.21□□□□□ -0.29
SHANK2-211ENST00000449833 KLHL34Q8N239 644 aa13.21□□□□□ -0.29
SHANK2-211ENST00000449833 PIBF1Q8WXW3 757 aa13.21□□□□□ -0.29
SHANK2-211ENST00000449833 UBE2HP62256 183 aa13.21□□□□□ -0.29
SHANK2-211ENST00000449833 PDS5BQ9NTI5 1447 aa13.21□□□□□ -0.29
SHANK2-211ENST00000449833 CTAGE15A4D2H0 777 aa13.21□□□□□ -0.29
SHANK2-211ENST00000449833 CTAGE8P0CG41 777 aa13.21□□□□□ -0.29
SHANK2-211ENST00000449833 RBM5P52756 815 aaKnown RBP eCLIP13.21□□□□□ -0.29
SHANK2-211ENST00000449833 CTAGE4Q8IX94 777 aa13.21□□□□□ -0.29
SHANK2-211ENST00000449833 CTAGE1Q96RT6 745 aa13.21□□□□□ -0.29
SHANK2-211ENST00000449833 NLRP2Q9NX02 1062 aa13.21□□□□□ -0.29
SHANK2-211ENST00000449833 RASEFQ8IZ41 740 aa13.21□□□□□ -0.3
SHANK2-211ENST00000449833 TBC1D5Q92609 795 aa13.21□□□□□ -0.3
SHANK2-211ENST00000449833 CCDC96Q2M329 555 aa13.21□□□□□ -0.3
SHANK2-211ENST00000449833 TTC21AQ8NDW8 1320 aa13.21□□□□□ -0.3
SHANK2-211ENST00000449833 CDCA7LQ96GN5 454 aa13.2□□□□□ -0.3
SHANK2-211ENST00000449833 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.2□□□□□ -0.3
SHANK2-211ENST00000449833 PNISRQ8TF01 805 aaKnown RBP13.2□□□□□ -0.3
SHANK2-211ENST00000449833 ATF3P18847 181 aa13.2□□□□□ -0.3
SHANK2-211ENST00000449833 COG7P83436 770 aa13.2□□□□□ -0.3
SHANK2-211ENST00000449833 TTC19Q6DKK2 380 aaPredicted RBP13.2□□□□□ -0.3
SHANK2-211ENST00000449833 INTS8Q75QN2 995 aaKnown RBP13.2□□□□□ -0.3
SHANK2-211ENST00000449833 AIDAQ96BJ3 306 aa13.2□□□□□ -0.3
SHANK2-211ENST00000449833 SRGAP3O43295 1099 aa13.2□□□□□ -0.3
SHANK2-211ENST00000449833 SLMAPQ14BN4 828 aa13.2□□□□□ -0.3
SHANK2-211ENST00000449833 CKAP2LQ8IYA6 745 aa13.2□□□□□ -0.3
SHANK2-211ENST00000449833 KIF21BO75037 1637 aa13.2□□□□□ -0.3
SHANK2-211ENST00000449833 RAB11FIP3O75154 756 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms