RNA–Protein interactions for RNA: ENST00000449784.5

COPS7B-214, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 978 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-214ENST00000449784 RTL1A6NKG5 1358 aa12.72□□□□□ -0.37
COPS7B-214ENST00000449784 MAP3K19Q56UN5 1328 aa12.72□□□□□ -0.37
COPS7B-214ENST00000449784 RBM6P78332 1123 aaKnown RBP12.72□□□□□ -0.37
COPS7B-214ENST00000449784 GIGYF2Q6Y7W6 1299 aaKnown RBP12.72□□□□□ -0.37
COPS7B-214ENST00000449784 CDK12Q9NYV4 1490 aaPredicted RBP12.72□□□□□ -0.37
COPS7B-214ENST00000449784 ANKRD26Q9UPS8 1709 aa12.71□□□□□ -0.37
COPS7B-214ENST00000449784 KIF24Q5T7B8 1368 aa12.71□□□□□ -0.37
COPS7B-214ENST00000449784 ZBTB7CA1YPR0 619 aa12.71□□□□□ -0.37
COPS7B-214ENST00000449784 FBLN1P23142 703 aa12.71□□□□□ -0.37
COPS7B-214ENST00000449784 BARGINQ6ZT62 677 aa12.71□□□□□ -0.37
COPS7B-214ENST00000449784 GJD4Q96KN9 370 aaPredicted RBP12.71□□□□□ -0.37
COPS7B-214ENST00000449784 TRIM47Q96LD4 638 aa12.71□□□□□ -0.37
COPS7B-214ENST00000449784 GLI3P10071 1580 aa12.71□□□□□ -0.37
COPS7B-214ENST00000449784 BLMP54132 1417 aaPredicted RBP12.71□□□□□ -0.38
COPS7B-214ENST00000449784 SPATA31A5Q5VU36 1347 aa12.7□□□□□ -0.38
COPS7B-214ENST00000449784 SPATA31A7Q8IWB4 1347 aa12.7□□□□□ -0.38
COPS7B-214ENST00000449784 RXRBP28702 533 aa12.7□□□□□ -0.38
COPS7B-214ENST00000449784 SH3BP2P78314 561 aa12.7□□□□□ -0.38
COPS7B-214ENST00000449784 NFX1Q12986 1120 aaKnown RBP12.7□□□□□ -0.38
COPS7B-214ENST00000449784 PRR7Q8TB68 274 aa12.7□□□□□ -0.38
COPS7B-214ENST00000449784 ZC3H15Q8WU90 426 aaKnown RBP12.7□□□□□ -0.38
COPS7B-214ENST00000449784 SENP2Q9HC62 589 aa12.7□□□□□ -0.38
COPS7B-214ENST00000449784 WASF2Q9Y6W5 498 aa12.7□□□□□ -0.38
COPS7B-214ENST00000449784 LTN1O94822 1766 aa12.69□□□□□ -0.38
COPS7B-214ENST00000449784 WDR17Q8IZU2 1322 aa12.69□□□□□ -0.38
COPS7B-214ENST00000449784 ZMYND10O75800 440 aa12.69□□□□□ -0.38
COPS7B-214ENST00000449784 RRS1Q15050 365 aaKnown RBP12.69□□□□□ -0.38
COPS7B-214ENST00000449784 ILDR2Q71H61 639 aa12.69□□□□□ -0.38
COPS7B-214ENST00000449784 IP6K1Q92551 441 aa12.69□□□□□ -0.38
COPS7B-214ENST00000449784 STRN4Q9NRL3 753 aa12.69□□□□□ -0.38
COPS7B-214ENST00000449784 RGS12O14924 1447 aa12.69□□□□□ -0.38
COPS7B-214ENST00000449784 CRB1P82279 1406 aa12.69□□□□□ -0.38
COPS7B-214ENST00000449784 SMG6Q86US8 1419 aaKnown RBP12.69□□□□□ -0.38
COPS7B-214ENST00000449784 FLT4P35916 1363 aa12.69□□□□□ -0.38
COPS7B-214ENST00000449784 SPATA31A1Q5TZJ5 1347 aa12.68□□□□□ -0.38
COPS7B-214ENST00000449784 BMP1P13497 986 aa12.68□□□□□ -0.38
COPS7B-214ENST00000449784 HOXC9P31274 260 aa12.68□□□□□ -0.38
COPS7B-214ENST00000449784 LARP1Q6PKG0 1096 aaKnown RBP12.68□□□□□ -0.38
COPS7B-214ENST00000449784 BEGAINQ9BUH8 593 aa12.68□□□□□ -0.38
COPS7B-214ENST00000449784 UNC93B1Q9H1C4 597 aa12.68□□□□□ -0.38
COPS7B-214ENST00000449784 SIAH2O43255 324 aa12.67□□□□□ -0.38
COPS7B-214ENST00000449784 AMPHP49418 695 aa12.67□□□□□ -0.38
COPS7B-214ENST00000449784 EVA1CP58658 441 aa12.67□□□□□ -0.38
COPS7B-214ENST00000449784 PTPRNQ16849 979 aa12.67□□□□□ -0.38
COPS7B-214ENST00000449784 MORC1Q86VD1 984 aa12.67□□□□□ -0.38
COPS7B-214ENST00000449784 BAP1Q92560 729 aa12.67□□□□□ -0.38
COPS7B-214ENST00000449784 EMILIN1Q9Y6C2 1016 aa12.67□□□□□ -0.38
COPS7B-214ENST00000449784 PEAK1Q9H792 1746 aa12.66□□□□□ -0.38
COPS7B-214ENST00000449784 MTMR2Q13614 643 aa12.66□□□□□ -0.38
COPS7B-214ENST00000449784 POLKQ9UBT6 870 aa12.66□□□□□ -0.38
COPS7B-214ENST00000449784 CCDC9Q9Y3X0 531 aaKnown RBP12.66□□□□□ -0.38
COPS7B-214ENST00000449784 INSRP06213 1382 aa12.66□□□□□ -0.38
COPS7B-214ENST00000449784 TNNT2P45379 298 aaPredicted RBP12.65□□□□□ -0.38
COPS7B-214ENST00000449784 AMHR2Q16671 573 aa12.65□□□□□ -0.38
COPS7B-214ENST00000449784 CC2D1BQ5T0F9 858 aaKnown RBP12.65□□□□□ -0.38
COPS7B-214ENST00000449784 ANKRD24Q8TF21 1146 aa12.65□□□□□ -0.38
COPS7B-214ENST00000449784 TLL2Q9Y6L7 1015 aa12.65□□□□□ -0.38
COPS7B-214ENST00000449784 EP400Q96L91 3159 aa12.65□□□□□ -0.39
COPS7B-214ENST00000449784 DDX10Q13206 875 aaKnown RBP12.64□□□□□ -0.39
COPS7B-214ENST00000449784 HSP90AB2PQ58FF8 381 aa12.64□□□□□ -0.39
COPS7B-214ENST00000449784 TOM1L2Q6ZVM7 507 aa12.64□□□□□ -0.39
COPS7B-214ENST00000449784 TCP11L2Q8N4U5 519 aa12.64□□□□□ -0.39
COPS7B-214ENST00000449784 CARD10Q9BWT7 1032 aa12.64□□□□□ -0.39
COPS7B-214ENST00000449784 EVA1BQ9NVM1 165 aa12.64□□□□□ -0.39
COPS7B-214ENST00000449784 THRAP3Q9Y2W1 955 aaKnown RBP12.64□□□□□ -0.39
COPS7B-214ENST00000449784 THSD7AQ9UPZ6 1657 aa12.64□□□□□ -0.39
COPS7B-214ENST00000449784 TERTO14746 1132 aaKnown RBP12.63□□□□□ -0.39
COPS7B-214ENST00000449784 CAPN5O15484 640 aaPredicted RBP12.63□□□□□ -0.39
COPS7B-214ENST00000449784 CSB-PGBD3P0DP91 1061 aa12.63□□□□□ -0.39
COPS7B-214ENST00000449784 KCNH2Q12809 1159 aa12.63□□□□□ -0.39
COPS7B-214ENST00000449784 KIFC2Q96AC6 838 aa12.63□□□□□ -0.39
COPS7B-214ENST00000449784 TBC1D2Q9BYX2 928 aa12.63□□□□□ -0.39
COPS7B-214ENST00000449784 RGPD5Q99666 1765 aa12.63□□□□□ -0.39
COPS7B-214ENST00000449784 FAM208AQ9UK61 1670 aaKnown RBP12.62□□□□□ -0.39
COPS7B-214ENST00000449784 USP35Q9P2H5 1018 aa12.62□□□□□ -0.39
COPS7B-214ENST00000449784 DISP2A7MBM2 1401 aa12.62□□□□□ -0.39
COPS7B-214ENST00000449784 PARD3Q8TEW0 1356 aa12.61□□□□□ -0.39
COPS7B-214ENST00000449784 PPM1GO15355 546 aaPredicted RBP12.61□□□□□ -0.39
COPS7B-214ENST00000449784 CTHP32929 405 aa12.61□□□□□ -0.39
COPS7B-214ENST00000449784 LCE2CQ5TA81 110 aa12.61□□□□□ -0.39
COPS7B-214ENST00000449784 SEPT12Q8IYM1 358 aa12.61□□□□□ -0.39
COPS7B-214ENST00000449784 NLRP2Q9NX02 1062 aa12.61□□□□□ -0.39
COPS7B-214ENST00000449784 MAP2P11137 1827 aaKnown RBP12.6□□□□□ -0.39
COPS7B-214ENST00000449784 TRIM46Q7Z4K8 759 aa12.6□□□□□ -0.39
COPS7B-214ENST00000449784 PARP9Q8IXQ6 854 aa12.6□□□□□ -0.39
COPS7B-214ENST00000449784 LTV1Q96GA3 475 aaPredicted RBP12.6□□□□□ -0.39
COPS7B-214ENST00000449784 PCDHB15Q9Y5E8 787 aa12.6□□□□□ -0.39
COPS7B-214ENST00000449784 NCAPD2Q15021 1401 aa12.6□□□□□ -0.39
COPS7B-214ENST00000449784 CSPP1Q1MSJ5 1256 aa12.59□□□□□ -0.39
COPS7B-214ENST00000449784 ZNF511Q8NB15 262 aa12.59□□□□□ -0.39
COPS7B-214ENST00000449784 CDCA7Q9BWT1 371 aaPredicted RBP12.59□□□□□ -0.39
COPS7B-214ENST00000449784 MTHFSP49914 203 aa12.58□□□□□ -0.4
COPS7B-214ENST00000449784 EIF4A2Q14240 407 aaKnown RBP12.58□□□□□ -0.4
COPS7B-214ENST00000449784 NBPF6Q5VWK0 638 aa12.58□□□□□ -0.4
COPS7B-214ENST00000449784 RSBN1LQ6PCB5 846 aaPredicted RBP12.58□□□□□ -0.4
COPS7B-214ENST00000449784 NBPF4Q96M43 638 aa12.58□□□□□ -0.4
COPS7B-214ENST00000449784 PARP4Q9UKK3 1724 aaKnown RBP12.57□□□□□ -0.4
COPS7B-214ENST00000449784 SPDYE5A6NIY4 337 aa12.57□□□□□ -0.4
COPS7B-214ENST00000449784 CNGB1Q14028 1251 aaPredicted RBP12.57□□□□□ -0.4
COPS7B-214ENST00000449784 COL3A1P02461 1466 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms