RNA–Protein interactions for RNA: ENST00000448748.1

LINC00349-201, long intergenic non-protein coding RNA 349, humanhuman

TSL 5 BASIC

Gene LINC00349, Length 841 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00349-201ENST00000448748 KRT76Q01546 638 aa10.62□□□□□ -0.71
LINC00349-201ENST00000448748 MTFR1Q15390 333 aa10.62□□□□□ -0.71
LINC00349-201ENST00000448748 DBN1Q16643 649 aa10.62□□□□□ -0.71
LINC00349-201ENST00000448748 TRIM22Q8IYM9 498 aa10.62□□□□□ -0.71
LINC00349-201ENST00000448748 OGFOD1Q8N543 542 aa10.62□□□□□ -0.71
LINC00349-201ENST00000448748 ZNF837Q96EG3 531 aaPredicted RBP10.62□□□□□ -0.71
LINC00349-201ENST00000448748 ZC3H13Q5T200 1668 aaKnown RBP10.62□□□□□ -0.71
LINC00349-201ENST00000448748 PRDM15P57071 1507 aaPredicted RBP10.62□□□□□ -0.71
LINC00349-201ENST00000448748 DUOX2Q9NRD8 1548 aa10.62□□□□□ -0.71
LINC00349-201ENST00000448748 INSM1Q01101 510 aaPredicted RBP10.61□□□□□ -0.71
LINC00349-201ENST00000448748 TPCN2Q8NHX9 752 aa10.61□□□□□ -0.71
LINC00349-201ENST00000448748 COL25A1Q9BXS0 654 aaPredicted RBP10.61□□□□□ -0.71
LINC00349-201ENST00000448748 DNAAF2Q9NVR5 837 aaKnown RBP10.61□□□□□ -0.71
LINC00349-201ENST00000448748 USP3Q9Y6I4 520 aa10.61□□□□□ -0.71
LINC00349-201ENST00000448748 KDM5DQ9BY66 1539 aa10.61□□□□□ -0.71
LINC00349-201ENST00000448748 ZNF142P52746 1687 aaPredicted RBP10.6□□□□□ -0.71
LINC00349-201ENST00000448748 BACH1O14867 736 aa10.6□□□□□ -0.71
LINC00349-201ENST00000448748 F11P03951 625 aa10.6□□□□□ -0.71
LINC00349-201ENST00000448748 CCDC102BQ68D86 513 aa10.6□□□□□ -0.71
LINC00349-201ENST00000448748 ZNF594Q96JF6 807 aaPredicted RBP10.6□□□□□ -0.71
LINC00349-201ENST00000448748 GPAMQ9HCL2 828 aa10.6□□□□□ -0.71
LINC00349-201ENST00000448748 IQSEC3Q9UPP2 1182 aaPredicted RBP10.6□□□□□ -0.71
LINC00349-201ENST00000448748 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.6□□□□□ -0.71
LINC00349-201ENST00000448748 NPATQ14207 1427 aa10.59□□□□□ -0.71
LINC00349-201ENST00000448748 ERBINQ96RT1 1412 aa10.59□□□□□ -0.71
LINC00349-201ENST00000448748 A0A1B0GTH6 734 aa10.59□□□□□ -0.71
LINC00349-201ENST00000448748 LORP23490 312 aaPredicted RBP10.59□□□□□ -0.71
LINC00349-201ENST00000448748 PLA2G4AP47712 749 aa10.59□□□□□ -0.71
LINC00349-201ENST00000448748 RNFT1Q5M7Z0 435 aa10.59□□□□□ -0.71
LINC00349-201ENST00000448748 LARGE2Q8N3Y3 721 aa10.59□□□□□ -0.71
LINC00349-201ENST00000448748 CNTNAP3BQ96NU0 1288 aa10.59□□□□□ -0.71
LINC00349-201ENST00000448748 CNTNAP3Q9BZ76 1288 aa10.59□□□□□ -0.71
LINC00349-201ENST00000448748 VWDEQ8N2E2 1590 aa10.58□□□□□ -0.72
LINC00349-201ENST00000448748 CDK2AP1O14519 115 aa10.58□□□□□ -0.72
LINC00349-201ENST00000448748 LMOD1P29536 600 aaPredicted RBP10.58□□□□□ -0.72
LINC00349-201ENST00000448748 ZNF295-AS1Q8N0V1 137 aa10.58□□□□□ -0.72
LINC00349-201ENST00000448748 NIFKQ9BYG3 293 aaKnown RBP10.58□□□□□ -0.72
LINC00349-201ENST00000448748 ABCC3O15438 1527 aa10.58□□□□□ -0.72
LINC00349-201ENST00000448748 NCOA1Q15788 1441 aa10.58□□□□□ -0.72
LINC00349-201ENST00000448748 H7C1W4 665 aa10.57□□□□□ -0.72
LINC00349-201ENST00000448748 RASA1P20936 1047 aa10.57□□□□□ -0.72
LINC00349-201ENST00000448748 MSX1P28360 303 aa10.57□□□□□ -0.72
LINC00349-201ENST00000448748 EPHA4P54764 986 aa10.57□□□□□ -0.72
LINC00349-201ENST00000448748 CFAP70Q5T0N1 1121 aa10.57□□□□□ -0.72
LINC00349-201ENST00000448748 TNS4Q8IZW8 715 aa10.57□□□□□ -0.72
LINC00349-201ENST00000448748 GMCL1Q96IK5 515 aa10.57□□□□□ -0.72
LINC00349-201ENST00000448748 SCHIP1Q9P0W5 487 aaPredicted RBP10.57□□□□□ -0.72
LINC00349-201ENST00000448748 MYO3AQ8NEV4 1616 aa10.57□□□□□ -0.72
LINC00349-201ENST00000448748 RRBP1Q9P2E9 1410 aaKnown RBP10.57□□□□□ -0.72
LINC00349-201ENST00000448748 KIF15Q9NS87 1388 aa10.56□□□□□ -0.72
LINC00349-201ENST00000448748 GPR25O00155 361 aa10.56□□□□□ -0.72
LINC00349-201ENST00000448748 DKK1O94907 266 aa10.56□□□□□ -0.72
LINC00349-201ENST00000448748 THBS1P07996 1170 aa10.56□□□□□ -0.72
LINC00349-201ENST00000448748 TSPY4P0CV99 314 aa10.56□□□□□ -0.72
LINC00349-201ENST00000448748 TSPY10P0CW01 314 aa10.56□□□□□ -0.72
LINC00349-201ENST00000448748 MLECQ14165 292 aa10.56□□□□□ -0.72
LINC00349-201ENST00000448748 SIX5Q8N196 739 aa10.56□□□□□ -0.72
LINC00349-201ENST00000448748 NUCKS1Q9H1E3 243 aaKnown RBP10.56□□□□□ -0.72
LINC00349-201ENST00000448748 RUBCNLQ9H714 662 aa10.56□□□□□ -0.72
LINC00349-201ENST00000448748 PTPRKQ15262 1439 aa10.56□□□□□ -0.72
LINC00349-201ENST00000448748 PZPP20742 1482 aa10.55□□□□□ -0.72
LINC00349-201ENST00000448748 FOXK2Q01167 660 aa10.55□□□□□ -0.72
LINC00349-201ENST00000448748 ZSCAN1Q8NBB4 408 aa10.55□□□□□ -0.72
LINC00349-201ENST00000448748 GTPBP3Q969Y2 492 aaKnown RBP10.55□□□□□ -0.72
LINC00349-201ENST00000448748 CEP152O94986 1710 aa10.55□□□□□ -0.72
LINC00349-201ENST00000448748 CAMSAP1Q5T5Y3 1602 aa10.55□□□□□ -0.72
LINC00349-201ENST00000448748 ZMYM3Q14202 1370 aa10.54□□□□□ -0.72
LINC00349-201ENST00000448748 LMTK2Q8IWU2 1503 aa10.54□□□□□ -0.72
LINC00349-201ENST00000448748 SFI1A8K8P3 1242 aa10.54□□□□□ -0.72
LINC00349-201ENST00000448748 GAS6Q14393 721 aa10.54□□□□□ -0.72
LINC00349-201ENST00000448748 CRTC2Q53ET0 693 aaPredicted RBP10.54□□□□□ -0.72
LINC00349-201ENST00000448748 TBCELQ5QJ74 424 aa10.54□□□□□ -0.72
LINC00349-201ENST00000448748 AIDAQ96BJ3 306 aa10.54□□□□□ -0.72
LINC00349-201ENST00000448748 CABP1Q9NZU7 370 aa10.54□□□□□ -0.72
LINC00349-201ENST00000448748 STRCQ7RTU9 1775 aa10.54□□□□□ -0.72
LINC00349-201ENST00000448748 ROCK1Q13464 1354 aa10.53□□□□□ -0.72
LINC00349-201ENST00000448748 UNC13BO14795 1591 aa10.53□□□□□ -0.72
LINC00349-201ENST00000448748 SPATA31D1Q6ZQQ2 1576 aa10.53□□□□□ -0.72
LINC00349-201ENST00000448748 ATP4AP20648 1035 aa10.53□□□□□ -0.72
LINC00349-201ENST00000448748 PARP3Q9Y6F1 533 aa10.53□□□□□ -0.72
LINC00349-201ENST00000448748 CSB-PGBD3P0DP91 1061 aa10.52□□□□□ -0.73
LINC00349-201ENST00000448748 FOXR1Q6PIV2 292 aa10.52□□□□□ -0.73
LINC00349-201ENST00000448748 LARP1Q6PKG0 1096 aaKnown RBP10.52□□□□□ -0.73
LINC00349-201ENST00000448748 SLC9A9Q8IVB4 645 aa10.52□□□□□ -0.73
LINC00349-201ENST00000448748 PGBD3Q8N328 593 aa10.52□□□□□ -0.73
LINC00349-201ENST00000448748 TSEN2Q8NCE0 465 aaKnown RBP10.52□□□□□ -0.73
LINC00349-201ENST00000448748 ZDHHC1Q8WTX9 485 aa10.52□□□□□ -0.73
LINC00349-201ENST00000448748 VRTNQ9H8Y1 702 aa10.52□□□□□ -0.73
LINC00349-201ENST00000448748 RBM19Q9Y4C8 960 aaKnown RBP10.52□□□□□ -0.73
LINC00349-201ENST00000448748 CEP170BQ9Y4F5 1589 aaPredicted RBP10.52□□□□□ -0.73
LINC00349-201ENST00000448748 ANKRD30AQ9BXX3 1397 aa10.52□□□□□ -0.73
LINC00349-201ENST00000448748 ARHGAP31Q2M1Z3 1444 aa10.51□□□□□ -0.73
LINC00349-201ENST00000448748 UHRF1BP1Q6BDS2 1440 aa10.51□□□□□ -0.73
LINC00349-201ENST00000448748 M0R2N6 131 aa10.51□□□□□ -0.73
LINC00349-201ENST00000448748 CEBPAP49715 358 aaPredicted RBP10.51□□□□□ -0.73
LINC00349-201ENST00000448748 PTK7Q13308 1070 aa10.51□□□□□ -0.73
LINC00349-201ENST00000448748 USP17L15C9J2P7 530 aa10.5□□□□□ -0.73
LINC00349-201ENST00000448748 USP17L10C9JJH3 530 aa10.5□□□□□ -0.73
LINC00349-201ENST00000448748 USP17L13C9JLJ4 530 aa10.5□□□□□ -0.73
LINC00349-201ENST00000448748 USP17L12C9JPN9 530 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms