RNA–Protein interactions for RNA: ENST00000448246.1

SP4-204, Transcript of Sp4 transcription factor, humanhuman

TSL 5

Gene SP4, Length 4,293 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP4-204ENST00000448246 SPTY2D1Q68D10 685 aaPredicted RBP12.34□□□□□ -0.43
SP4-204ENST00000448246 IL17REQ8NFR9 667 aa12.34□□□□□ -0.43
SP4-204ENST00000448246 CCDC87Q9NVE4 849 aa12.34□□□□□ -0.43
SP4-204ENST00000448246 PA2G4Q9UQ80 394 aaKnown RBP12.34□□□□□ -0.43
SP4-204ENST00000448246 ZNF521Q96K83 1311 aa12.34□□□□□ -0.43
SP4-204ENST00000448246 ZNF213O14771 459 aa12.34□□□□□ -0.43
SP4-204ENST00000448246 HDAC1Q13547 482 aaPredicted RBP12.34□□□□□ -0.43
SP4-204ENST00000448246 CASTP20810 708 aaKnown RBP12.33□□□□□ -0.44
SP4-204ENST00000448246 PARP10Q53GL7 1025 aa12.33□□□□□ -0.44
SP4-204ENST00000448246 MAP3K4Q9Y6R4 1608 aa12.33□□□□□ -0.44
SP4-204ENST00000448246 RANBP6O60518 1105 aaKnown RBP12.33□□□□□ -0.44
SP4-204ENST00000448246 BAG6P46379 1132 aa12.33□□□□□ -0.44
SP4-204ENST00000448246 ZNF444Q8N0Y2 327 aaPredicted RBP12.33□□□□□ -0.44
SP4-204ENST00000448246 CNBD1Q8NA66 436 aa12.33□□□□□ -0.44
SP4-204ENST00000448246 HELBQ8NG08 1087 aaPredicted RBP12.33□□□□□ -0.44
SP4-204ENST00000448246 CDKL5O76039 1030 aa12.33□□□□□ -0.44
SP4-204ENST00000448246 LARP1BQ659C4 914 aaKnown RBP12.32□□□□□ -0.44
SP4-204ENST00000448246 IQCA1Q86XH1 822 aa12.32□□□□□ -0.44
SP4-204ENST00000448246 ZSCAN31Q96LW9 406 aaPredicted RBP12.32□□□□□ -0.44
SP4-204ENST00000448246 ANTXR1Q9H6X2 564 aa12.32□□□□□ -0.44
SP4-204ENST00000448246 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.32□□□□□ -0.44
SP4-204ENST00000448246 USP19O94966 1318 aa12.32□□□□□ -0.44
SP4-204ENST00000448246 EIF4A1P60842 406 aaKnown RBP12.32□□□□□ -0.44
SP4-204ENST00000448246 POLR1AO95602 1720 aaPredicted RBP12.32□□□□□ -0.44
SP4-204ENST00000448246 AATKQ6ZMQ8 1374 aa12.32□□□□□ -0.44
SP4-204ENST00000448246 STK38Q15208 465 aa12.31□□□□□ -0.44
SP4-204ENST00000448246 BMP2KLQ5H9B9 411 aa12.31□□□□□ -0.44
SP4-204ENST00000448246 RNF41Q9H4P4 317 aaPredicted RBP12.31□□□□□ -0.44
SP4-204ENST00000448246 ATP7BP35670 1465 aa12.31□□□□□ -0.44
SP4-204ENST00000448246 WDR17Q8IZU2 1322 aa12.31□□□□□ -0.44
SP4-204ENST00000448246 TRMT2AQ8IZ69 625 aaKnown RBP12.31□□□□□ -0.44
SP4-204ENST00000448246 METTL22Q9BUU2 404 aaPredicted RBP12.31□□□□□ -0.44
SP4-204ENST00000448246 ERBB3P21860 1342 aa12.31□□□□□ -0.44
SP4-204ENST00000448246 TSR1Q2NL82 804 aaKnown RBP12.31□□□□□ -0.44
SP4-204ENST00000448246 CCDC191Q8NCU4 936 aa12.31□□□□□ -0.44
SP4-204ENST00000448246 ANKRD20A12PQ8NF67 263 aa12.31□□□□□ -0.44
SP4-204ENST00000448246 SHROOM2Q13796 1616 aa12.31□□□□□ -0.44
SP4-204ENST00000448246 FSD2A1L4K1 749 aa12.31□□□□□ -0.44
SP4-204ENST00000448246 HCLS1P14317 486 aaPredicted RBP12.31□□□□□ -0.44
SP4-204ENST00000448246 MTERF4Q7Z6M4 381 aaKnown RBP12.31□□□□□ -0.44
SP4-204ENST00000448246 OGFOD1Q8N543 542 aa12.31□□□□□ -0.44
SP4-204ENST00000448246 PIBF1Q8WXW3 757 aa12.31□□□□□ -0.44
SP4-204ENST00000448246 FIBPO43427 364 aa12.3□□□□□ -0.44
SP4-204ENST00000448246 CEBPZQ03701 1054 aaKnown RBP12.3□□□□□ -0.44
SP4-204ENST00000448246 USP16Q9Y5T5 823 aa12.3□□□□□ -0.44
SP4-204ENST00000448246 SASS6Q6UVJ0 657 aa12.3□□□□□ -0.44
SP4-204ENST00000448246 CDC42BPBQ9Y5S2 1711 aa12.3□□□□□ -0.44
SP4-204ENST00000448246 SPATA31A3Q5VYP0 1347 aa12.3□□□□□ -0.44
SP4-204ENST00000448246 PRPF40AO75400 957 aaKnown RBP12.3□□□□□ -0.44
SP4-204ENST00000448246 ZNF396Q96N95 335 aaPredicted RBP12.3□□□□□ -0.44
SP4-204ENST00000448246 GIGYF1O75420 1035 aaPredicted RBP12.29□□□□□ -0.44
SP4-204ENST00000448246 SSFA2P28290 1259 aa12.29□□□□□ -0.44
SP4-204ENST00000448246 TTLL12Q14166 644 aaPredicted RBP12.29□□□□□ -0.44
SP4-204ENST00000448246 PDE1AP54750 535 aa12.29□□□□□ -0.44
SP4-204ENST00000448246 CEP85Q6P2H3 762 aa12.29□□□□□ -0.44
SP4-204ENST00000448246 JMYQ8N9B5 988 aa12.29□□□□□ -0.44
SP4-204ENST00000448246 ZBTB40Q9NUA8 1239 aa12.29□□□□□ -0.44
SP4-204ENST00000448246 IQGAP3Q86VI3 1631 aa12.29□□□□□ -0.44
SP4-204ENST00000448246 KCNQ3O43525 872 aa12.29□□□□□ -0.44
SP4-204ENST00000448246 TPM1P09493 284 aa12.29□□□□□ -0.44
SP4-204ENST00000448246 TXLNAP40222 546 aa12.29□□□□□ -0.44
SP4-204ENST00000448246 ZNF772Q68DY9 489 aaPredicted RBP12.29□□□□□ -0.44
SP4-204ENST00000448246 RNF214Q8ND24 703 aa12.29□□□□□ -0.44
SP4-204ENST00000448246 CCDC39Q9UFE4 941 aa12.29□□□□□ -0.44
SP4-204ENST00000448246 ZFYP08048 801 aaPredicted RBP12.28□□□□□ -0.44
SP4-204ENST00000448246 NUCB1Q02818 461 aa12.28□□□□□ -0.44
SP4-204ENST00000448246 ZGPATQ8N5A5 531 aaKnown RBP12.28□□□□□ -0.44
SP4-204ENST00000448246 CTCFLQ8NI51 663 aaPredicted RBP12.28□□□□□ -0.44
SP4-204ENST00000448246 BICC1Q9H694 974 aaKnown RBP12.28□□□□□ -0.44
SP4-204ENST00000448246 KDM5AP29375 1690 aaKnown RBP12.28□□□□□ -0.44
SP4-204ENST00000448246 F8W031 263 aaPredicted RBP12.28□□□□□ -0.44
SP4-204ENST00000448246 TTC22Q5TAA0 569 aa12.28□□□□□ -0.44
SP4-204ENST00000448246 JDP2Q8WYK2 163 aa12.28□□□□□ -0.44
SP4-204ENST00000448246 DDX11Q96FC9 970 aa12.28□□□□□ -0.44
SP4-204ENST00000448246 IGSF1Q8N6C5 1336 aa12.28□□□□□ -0.44
SP4-204ENST00000448246 WDR33Q9C0J8 1336 aaKnown RBP12.28□□□□□ -0.44
SP4-204ENST00000448246 UQCRHLA0A096LP55 91 aa12.28□□□□□ -0.44
SP4-204ENST00000448246 CCDC196A0A1B0GTZ2 297 aa12.28□□□□□ -0.44
SP4-204ENST00000448246 MYO1BO43795 1136 aa12.28□□□□□ -0.44
SP4-204ENST00000448246 UQCRHP07919 91 aa12.28□□□□□ -0.44
SP4-204ENST00000448246 HMGB1P09429 215 aaKnown RBP12.28□□□□□ -0.44
SP4-204ENST00000448246 CDK5RAP3Q96JB5 506 aa12.28□□□□□ -0.44
SP4-204ENST00000448246 DCTPP1Q9H773 170 aa12.28□□□□□ -0.44
SP4-204ENST00000448246 KINO60870 393 aaKnown RBP12.28□□□□□ -0.44
SP4-204ENST00000448246 CYP7A1P22680 504 aa12.28□□□□□ -0.44
SP4-204ENST00000448246 SNX21Q969T3 373 aa12.28□□□□□ -0.44
SP4-204ENST00000448246 IFIT3O14879 490 aaKnown RBP12.27□□□□□ -0.44
SP4-204ENST00000448246 HAND2P61296 217 aa12.27□□□□□ -0.44
SP4-204ENST00000448246 CCDC82Q8N4S0 544 aa12.27□□□□□ -0.44
SP4-204ENST00000448246 TPM3P06753 285 aa12.27□□□□□ -0.45
SP4-204ENST00000448246 RXRBP28702 533 aa12.27□□□□□ -0.45
SP4-204ENST00000448246 SLC9C2Q5TAH2 1124 aa12.27□□□□□ -0.45
SP4-204ENST00000448246 TBC1D9Q6ZT07 1266 aa12.27□□□□□ -0.45
SP4-204ENST00000448246 ZNF804AQ7Z570 1209 aa12.27□□□□□ -0.45
SP4-204ENST00000448246 PCMTD1Q96MG8 357 aaPredicted RBP12.27□□□□□ -0.45
SP4-204ENST00000448246 RNF17Q9BXT8 1623 aaKnown RBP12.27□□□□□ -0.45
SP4-204ENST00000448246 LRRIQ1Q96JM4 1722 aa12.27□□□□□ -0.45
SP4-204ENST00000448246 GSTO1P78417 241 aa12.27□□□□□ -0.45
SP4-204ENST00000448246 FAM182BQ5T319 152 aa12.27□□□□□ -0.45
SP4-204ENST00000448246 NAA16Q6N069 864 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms