RNA–Protein interactions for RNA: ENST00000447745.5

CTDSPL-207, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-207ENST00000447745 SLC10A5Q5PT55 438 aa13.02□□□□□ -0.33
CTDSPL-207ENST00000447745 ISCA1Q9BUE6 129 aa13.02□□□□□ -0.33
CTDSPL-207ENST00000447745 ZNF219Q9P2Y4 722 aaPredicted RBP13.02□□□□□ -0.33
CTDSPL-207ENST00000447745 TRMT112Q9UI30 125 aaKnown RBP13.02□□□□□ -0.33
CTDSPL-207ENST00000447745 ABCC12Q96J65 1359 aa13.02□□□□□ -0.33
CTDSPL-207ENST00000447745 ARFGEF1Q9Y6D6 1849 aa13.02□□□□□ -0.33
CTDSPL-207ENST00000447745 C21orf2O43822 256 aa13.01□□□□□ -0.33
CTDSPL-207ENST00000447745 DDX58O95786 925 aaKnown RBP13.01□□□□□ -0.33
CTDSPL-207ENST00000447745 G2E3Q7L622 706 aa13.01□□□□□ -0.33
CTDSPL-207ENST00000447745 SYNE4Q8N205 404 aa13.01□□□□□ -0.33
CTDSPL-207ENST00000447745 ZNF784Q8NCA9 323 aaPredicted RBP13.01□□□□□ -0.33
CTDSPL-207ENST00000447745 ZNF428Q96B54 188 aa13.01□□□□□ -0.33
CTDSPL-207ENST00000447745 DLEC1Q9Y238 1755 aa13.01□□□□□ -0.33
CTDSPL-207ENST00000447745 TRIM28Q13263 835 aaKnown RBP13□□□□□ -0.33
CTDSPL-207ENST00000447745 PRPF40BQ6NWY9 871 aaKnown RBP13□□□□□ -0.33
CTDSPL-207ENST00000447745 NLRP3Q96P20 1036 aa13□□□□□ -0.33
CTDSPL-207ENST00000447745 MYD88Q99836 296 aa13□□□□□ -0.33
CTDSPL-207ENST00000447745 COL11A2P13942 1736 aaPredicted RBP12.99□□□□□ -0.33
CTDSPL-207ENST00000447745 RNF123Q5XPI4 1314 aa12.99□□□□□ -0.33
CTDSPL-207ENST00000447745 SH3TC1Q8TE82 1336 aa12.99□□□□□ -0.33
CTDSPL-207ENST00000447745 PI4KAP2A4QPH2 592 aa12.99□□□□□ -0.33
CTDSPL-207ENST00000447745 E9PSI1 815 aa12.99□□□□□ -0.33
CTDSPL-207ENST00000447745 HCLS1P14317 486 aaPredicted RBP12.99□□□□□ -0.33
CTDSPL-207ENST00000447745 ALDH1B1P30837 517 aa12.99□□□□□ -0.33
CTDSPL-207ENST00000447745 HOXA10P31260 410 aaPredicted RBP12.99□□□□□ -0.33
CTDSPL-207ENST00000447745 SLFN5Q08AF3 891 aa12.99□□□□□ -0.33
CTDSPL-207ENST00000447745 CRY2Q49AN0 593 aa12.99□□□□□ -0.33
CTDSPL-207ENST00000447745 C9orf131Q5VYM1 1079 aa12.99□□□□□ -0.33
CTDSPL-207ENST00000447745 KSR2Q6VAB6 950 aa12.99□□□□□ -0.33
CTDSPL-207ENST00000447745 C3orf67Q6ZVT6 689 aa12.99□□□□□ -0.33
CTDSPL-207ENST00000447745 PI4KAP1Q8N8J0 262 aa12.99□□□□□ -0.33
CTDSPL-207ENST00000447745 METTL22Q9BUU2 404 aaPredicted RBP12.99□□□□□ -0.33
CTDSPL-207ENST00000447745 MAP3K2Q9Y2U5 619 aa12.99□□□□□ -0.33
CTDSPL-207ENST00000447745 SLX4Q8IY92 1834 aa12.98□□□□□ -0.33
CTDSPL-207ENST00000447745 C7orf43Q8WVR3 580 aa12.98□□□□□ -0.33
CTDSPL-207ENST00000447745 RPGRQ92834 1020 aaKnown RBP12.98□□□□□ -0.33
CTDSPL-207ENST00000447745 FAM89AQ96GI7 184 aa12.98□□□□□ -0.33
CTDSPL-207ENST00000447745 CDCA7LQ96GN5 454 aa12.98□□□□□ -0.33
CTDSPL-207ENST00000447745 ANKRD36CQ5JPF3 1778 aa12.98□□□□□ -0.33
CTDSPL-207ENST00000447745 RIC1Q4ADV7 1423 aa12.97□□□□□ -0.33
CTDSPL-207ENST00000447745 NFKBIEO00221 500 aa12.97□□□□□ -0.33
CTDSPL-207ENST00000447745 RASSF7Q02833 373 aa12.97□□□□□ -0.33
CTDSPL-207ENST00000447745 FLIIQ13045 1269 aa12.97□□□□□ -0.33
CTDSPL-207ENST00000447745 RTL5Q5HYW3 569 aaPredicted RBP12.97□□□□□ -0.33
CTDSPL-207ENST00000447745 RBM17Q96I25 401 aaKnown RBP12.97□□□□□ -0.33
CTDSPL-207ENST00000447745 TNRC6CQ9HCJ0 1690 aaKnown RBP12.96□□□□□ -0.33
CTDSPL-207ENST00000447745 SOGA3Q5TF21 947 aa12.96□□□□□ -0.33
CTDSPL-207ENST00000447745 CCDC191Q8NCU4 936 aa12.96□□□□□ -0.33
CTDSPL-207ENST00000447745 CRAMP1Q96RY5 1269 aa12.96□□□□□ -0.33
CTDSPL-207ENST00000447745 RNF181Q9P0P0 153 aa12.96□□□□□ -0.33
CTDSPL-207ENST00000447745 ARFGEF2Q9Y6D5 1785 aa12.96□□□□□ -0.34
CTDSPL-207ENST00000447745 ADCY9O60503 1353 aa12.95□□□□□ -0.34
CTDSPL-207ENST00000447745 IGKV5-2P06315 115 aa12.95□□□□□ -0.34
CTDSPL-207ENST00000447745 LMNB1P20700 586 aa12.95□□□□□ -0.34
CTDSPL-207ENST00000447745 PRELPP51888 382 aa12.95□□□□□ -0.34
CTDSPL-207ENST00000447745 FKBP5Q13451 457 aaPredicted RBP12.95□□□□□ -0.34
CTDSPL-207ENST00000447745 OLFM4Q6UX06 510 aa12.95□□□□□ -0.34
CTDSPL-207ENST00000447745 TRMT2AQ8IZ69 625 aaKnown RBP12.95□□□□□ -0.34
CTDSPL-207ENST00000447745 CWC25Q9NXE8 425 aaPredicted RBP12.95□□□□□ -0.34
CTDSPL-207ENST00000447745 CACNA1SQ13698 1873 aa12.94□□□□□ -0.34
CTDSPL-207ENST00000447745 IRS4O14654 1257 aaPredicted RBP12.94□□□□□ -0.34
CTDSPL-207ENST00000447745 NEXNQ0ZGT2 675 aa12.94□□□□□ -0.34
CTDSPL-207ENST00000447745 CCDC93Q567U6 631 aa12.94□□□□□ -0.34
CTDSPL-207ENST00000447745 ZBTB38Q8NAP3 1195 aaPredicted RBP12.94□□□□□ -0.34
CTDSPL-207ENST00000447745 ZNF526Q8TF50 670 aaPredicted RBP12.94□□□□□ -0.34
CTDSPL-207ENST00000447745 JARID2Q92833 1246 aaPredicted RBP12.94□□□□□ -0.34
CTDSPL-207ENST00000447745 SBF1O95248 1867 aa12.93□□□□□ -0.34
CTDSPL-207ENST00000447745 CACNA1FO60840 1977 aa12.93□□□□□ -0.34
CTDSPL-207ENST00000447745 PCCAP05165 728 aaPredicted RBP12.93□□□□□ -0.34
CTDSPL-207ENST00000447745 SF3B3Q15393 1217 aaKnown RBP12.93□□□□□ -0.34
CTDSPL-207ENST00000447745 CWF19L2Q2TBE0 894 aaKnown RBP12.93□□□□□ -0.34
CTDSPL-207ENST00000447745 DDX46Q7L014 1031 aaKnown RBP12.93□□□□□ -0.34
CTDSPL-207ENST00000447745 RTKN2Q8IZC4 609 aa12.93□□□□□ -0.34
CTDSPL-207ENST00000447745 DNAAF4Q8WXU2 420 aa12.93□□□□□ -0.34
CTDSPL-207ENST00000447745 TAOK3Q9H2K8 898 aa12.93□□□□□ -0.34
CTDSPL-207ENST00000447745 ABCC4O15439 1325 aa12.92□□□□□ -0.34
CTDSPL-207ENST00000447745 LTBP3Q9NS15 1303 aa12.92□□□□□ -0.34
CTDSPL-207ENST00000447745 NEURL1BA8MQ27 555 aa12.92□□□□□ -0.34
CTDSPL-207ENST00000447745 BBOX1O75936 387 aa12.92□□□□□ -0.34
CTDSPL-207ENST00000447745 HSP90B1P14625 803 aaKnown RBP12.92□□□□□ -0.34
CTDSPL-207ENST00000447745 CC2D2BQ6DHV5 1058 aa12.92□□□□□ -0.34
CTDSPL-207ENST00000447745 GPBP1L1Q9HC44 474 aaPredicted RBP12.92□□□□□ -0.34
CTDSPL-207ENST00000447745 F6X3S4 739 aa12.91□□□□□ -0.34
CTDSPL-207ENST00000447745 PPEF1O14829 653 aaPredicted RBP12.91□□□□□ -0.34
CTDSPL-207ENST00000447745 FKBP4Q02790 459 aaKnown RBP eCLIP12.91□□□□□ -0.34
CTDSPL-207ENST00000447745 MRPL50Q8N5N7 158 aaKnown RBP12.91□□□□□ -0.34
CTDSPL-207ENST00000447745 FER1L6Q2WGJ9 1857 aa12.91□□□□□ -0.34
CTDSPL-207ENST00000447745 LAMB2P55268 1798 aa12.9□□□□□ -0.34
CTDSPL-207ENST00000447745 H7C1W4 665 aa12.9□□□□□ -0.34
CTDSPL-207ENST00000447745 PDE8AO60658 829 aa12.9□□□□□ -0.34
CTDSPL-207ENST00000447745 HNRNPUQ00839 825 aaKnown RBP eCLIP12.9□□□□□ -0.34
CTDSPL-207ENST00000447745 GRAPQ13588 217 aa12.9□□□□□ -0.34
CTDSPL-207ENST00000447745 GCKRQ14397 625 aa12.9□□□□□ -0.34
CTDSPL-207ENST00000447745 SLC51AQ86UW1 340 aa12.9□□□□□ -0.34
CTDSPL-207ENST00000447745 LINS1Q8NG48 757 aa12.9□□□□□ -0.34
CTDSPL-207ENST00000447745 GRAPLQ8TC17 118 aaPredicted RBP12.9□□□□□ -0.34
CTDSPL-207ENST00000447745 SSH1Q8WYL5 1049 aa12.9□□□□□ -0.34
CTDSPL-207ENST00000447745 ATP6V0A2Q9Y487 856 aa12.9□□□□□ -0.34
CTDSPL-207ENST00000447745 CCDC88AQ3V6T2 1871 aa12.9□□□□□ -0.34
CTDSPL-207ENST00000447745 DDX60Q8IY21 1712 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms