RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 C4orf48Q5BLP8 95 aa5.41□□□□□ -1.54
PMS1-216ENST00000447734 C6orf118Q5T5N4 469 aa5.41□□□□□ -1.54
PMS1-216ENST00000447734 RNF187Q5TA31 235 aaPredicted RBP5.41□□□□□ -1.54
PMS1-216ENST00000447734 HS2ST1Q7LGA3 356 aa5.41□□□□□ -1.54
PMS1-216ENST00000447734 ATCAYQ86WG3 371 aa5.41□□□□□ -1.54
PMS1-216ENST00000447734 GJD3Q8N144 294 aa5.41□□□□□ -1.54
PMS1-216ENST00000447734 ITPKCQ96DU7 683 aa5.41□□□□□ -1.54
PMS1-216ENST00000447734 MRFAP1L1Q96HT8 127 aa5.41□□□□□ -1.54
PMS1-216ENST00000447734 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.41□□□□□ -1.54
PMS1-216ENST00000447734 METTL14Q9HCE5 456 aaKnown RBP5.41□□□□□ -1.54
PMS1-216ENST00000447734 POLIQ9UNA4 740 aa5.41□□□□□ -1.54
PMS1-216ENST00000447734 WASLO00401 505 aaPredicted RBP5.4□□□□□ -1.54
PMS1-216ENST00000447734 GDF11O95390 407 aa5.4□□□□□ -1.54
PMS1-216ENST00000447734 FGRP09769 529 aa5.4□□□□□ -1.54
PMS1-216ENST00000447734 EIF4BP23588 611 aaKnown RBP5.4□□□□□ -1.54
PMS1-216ENST00000447734 SCNN1DP51172 638 aa5.4□□□□□ -1.54
PMS1-216ENST00000447734 EPHA4P54764 986 aa5.4□□□□□ -1.54
PMS1-216ENST00000447734 ANAPC15P60006 121 aa5.4□□□□□ -1.54
PMS1-216ENST00000447734 CERS3Q8IU89 383 aa5.4□□□□□ -1.54
PMS1-216ENST00000447734 TMEM151AQ8N4L1 468 aa5.4□□□□□ -1.54
PMS1-216ENST00000447734 ZCRB1Q8TBF4 217 aaKnown RBP5.4□□□□□ -1.54
PMS1-216ENST00000447734 CDK15Q96Q40 435 aa5.4□□□□□ -1.54
PMS1-216ENST00000447734 CSRNP1Q96S65 589 aa5.4□□□□□ -1.54
PMS1-216ENST00000447734 C1QTNF2Q9BXJ5 285 aa5.4□□□□□ -1.54
PMS1-216ENST00000447734 DMGDHQ9UI17 866 aaKnown RBP5.4□□□□□ -1.54
PMS1-216ENST00000447734 SPG7Q9UQ90 795 aa5.4□□□□□ -1.54
PMS1-216ENST00000447734 ZBTB39O15060 712 aa5.39□□□□□ -1.55
PMS1-216ENST00000447734 ZIC2O95409 532 aaPredicted RBP5.39□□□□□ -1.55
PMS1-216ENST00000447734 STAU1O95793 577 aaKnown RBP5.39□□□□□ -1.55
PMS1-216ENST00000447734 INHAP05111 366 aa5.39□□□□□ -1.55
PMS1-216ENST00000447734 BRD2P25440 801 aaKnown RBP5.39□□□□□ -1.55
PMS1-216ENST00000447734 HSD3B2P26439 372 aa5.39□□□□□ -1.55
PMS1-216ENST00000447734 MZF1P28698 734 aaPredicted RBP5.39□□□□□ -1.55
PMS1-216ENST00000447734 DNM1Q05193 864 aaKnown RBP5.39□□□□□ -1.55
PMS1-216ENST00000447734 PTPN12Q05209 780 aaKnown RBP5.39□□□□□ -1.55
PMS1-216ENST00000447734 CC2D2BQ6DHV5 1058 aa5.39□□□□□ -1.55
PMS1-216ENST00000447734 CKAP2LQ8IYA6 745 aa5.39□□□□□ -1.55
PMS1-216ENST00000447734 TRMT44Q8IYL2 757 aaKnown RBP5.39□□□□□ -1.55
PMS1-216ENST00000447734 STAG2Q8N3U4 1231 aa5.39□□□□□ -1.55
PMS1-216ENST00000447734 KCTD15Q96SI1 283 aaPredicted RBP5.39□□□□□ -1.55
PMS1-216ENST00000447734 C2orf49Q9BVC5 232 aaPredicted RBP5.39□□□□□ -1.55
PMS1-216ENST00000447734 CFHR5Q9BXR6 569 aa5.39□□□□□ -1.55
PMS1-216ENST00000447734 QTRT2Q9H974 415 aaKnown RBP5.39□□□□□ -1.55
PMS1-216ENST00000447734 SRA1Q9HD15 236 aaKnown RBP5.39□□□□□ -1.55
PMS1-216ENST00000447734 GGT7Q9UJ14 662 aa5.39□□□□□ -1.55
PMS1-216ENST00000447734 DNMT3LQ9UJW3 386 aa5.39□□□□□ -1.55
PMS1-216ENST00000447734 ADAMTS8Q9UP79 889 aa5.39□□□□□ -1.55
PMS1-216ENST00000447734 CHMP3Q9Y3E7 222 aa5.39□□□□□ -1.55
PMS1-216ENST00000447734 MRPL42Q9Y6G3 142 aaKnown RBP5.39□□□□□ -1.55
PMS1-216ENST00000447734 MAN1A2O60476 641 aa5.38□□□□□ -1.55
PMS1-216ENST00000447734 ATF4P18848 351 aaPredicted RBP5.38□□□□□ -1.55
PMS1-216ENST00000447734 GRM5P41594 1212 aa5.38□□□□□ -1.55
PMS1-216ENST00000447734 ERVK-9P63128 1117 aa5.38□□□□□ -1.55
PMS1-216ENST00000447734 ARID5BQ14865 1188 aa5.38□□□□□ -1.55
PMS1-216ENST00000447734 TBCELQ5QJ74 424 aa5.38□□□□□ -1.55
PMS1-216ENST00000447734 SLC9A9Q8IVB4 645 aa5.38□□□□□ -1.55
PMS1-216ENST00000447734 EDEM1Q92611 657 aa5.38□□□□□ -1.55
PMS1-216ENST00000447734 MYO19Q96H55 970 aa5.38□□□□□ -1.55
PMS1-216ENST00000447734 LRFN2Q9ULH4 789 aa5.38□□□□□ -1.55
PMS1-216ENST00000447734 NOP58Q9Y2X3 529 aaKnown RBP5.38□□□□□ -1.55
PMS1-216ENST00000447734 SOS2Q07890 1332 aaPredicted RBP5.38□□□□□ -1.55
PMS1-216ENST00000447734 K7ELQ4 463 aaPredicted RBP5.37□□□□□ -1.55
PMS1-216ENST00000447734 ERVH48-1M5A8F1 160 aa5.37□□□□□ -1.55
PMS1-216ENST00000447734 EIF1AYO14602 144 aaKnown RBP5.37□□□□□ -1.55
PMS1-216ENST00000447734 PDGFAP04085 211 aa5.37□□□□□ -1.55
PMS1-216ENST00000447734 NEFLP07196 543 aa5.37□□□□□ -1.55
PMS1-216ENST00000447734 XRCC5P13010 732 aaKnown RBP5.37□□□□□ -1.55
PMS1-216ENST00000447734 GJA8P48165 433 aa5.37□□□□□ -1.55
PMS1-216ENST00000447734 PSMA6P60900 246 aaKnown RBP5.37□□□□□ -1.55
PMS1-216ENST00000447734 PAK2Q13177 524 aa5.37□□□□□ -1.55
PMS1-216ENST00000447734 ORC1Q13415 861 aa5.37□□□□□ -1.55
PMS1-216ENST00000447734 INTS6LQ5JSJ4 861 aaKnown RBP5.37□□□□□ -1.55
PMS1-216ENST00000447734 RNFT1Q5M7Z0 435 aa5.37□□□□□ -1.55
PMS1-216ENST00000447734 ZNF385CQ66K41 422 aaPredicted RBP5.37□□□□□ -1.55
PMS1-216ENST00000447734 TRIM52Q96A61 297 aa5.37□□□□□ -1.55
PMS1-216ENST00000447734 CNTNAP3BQ96NU0 1288 aa5.37□□□□□ -1.55
PMS1-216ENST00000447734 CNTNAP3Q9BZ76 1288 aa5.37□□□□□ -1.55
PMS1-216ENST00000447734 BRINP2Q9C0B6 783 aa5.37□□□□□ -1.55
PMS1-216ENST00000447734 OSBPL3Q9H4L5 887 aa5.37□□□□□ -1.55
PMS1-216ENST00000447734 ETNK1Q9HBU6 452 aa5.37□□□□□ -1.55
PMS1-216ENST00000447734 KLHL42Q9P2K6 505 aa5.37□□□□□ -1.55
PMS1-216ENST00000447734 PPME1Q9Y570 386 aa5.37□□□□□ -1.55
PMS1-216ENST00000447734 PCSK2P16519 638 aa5.36□□□□□ -1.55
PMS1-216ENST00000447734 ZAP70P43403 619 aa5.36□□□□□ -1.55
PMS1-216ENST00000447734 FOXK2Q01167 660 aa5.36□□□□□ -1.55
PMS1-216ENST00000447734 FAM26DQ5JW98 314 aa5.36□□□□□ -1.55
PMS1-216ENST00000447734 NBPF6Q5VWK0 638 aa5.36□□□□□ -1.55
PMS1-216ENST00000447734 LINC00528Q8N1L1 170 aa5.36□□□□□ -1.55
PMS1-216ENST00000447734 MEIOBQ8N635 442 aa5.36□□□□□ -1.55
PMS1-216ENST00000447734 TTC16Q8NEE8 873 aa5.36□□□□□ -1.55
PMS1-216ENST00000447734 WHAMMQ8TF30 809 aa5.36□□□□□ -1.55
PMS1-216ENST00000447734 GPRASP2Q96D09 838 aa5.36□□□□□ -1.55
PMS1-216ENST00000447734 NGLY1Q96IV0 654 aa5.36□□□□□ -1.55
PMS1-216ENST00000447734 NBPF4Q96M43 638 aa5.36□□□□□ -1.55
PMS1-216ENST00000447734 SLC4A9Q96Q91 983 aa5.36□□□□□ -1.55
PMS1-216ENST00000447734 DNAJC25Q9H1X3 360 aa5.36□□□□□ -1.55
PMS1-216ENST00000447734 SCHIP1Q9P0W5 487 aaPredicted RBP5.36□□□□□ -1.55
PMS1-216ENST00000447734 A6NJY4 79 aa5.35□□□□□ -1.55
PMS1-216ENST00000447734 OPLAHO14841 1288 aa5.35□□□□□ -1.55
PMS1-216ENST00000447734 SSBP05455 408 aaKnown RBP eCLIP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms